RNA–Protein interactions for RNA: ENST00000512665.5

NEDD9-213, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-213ENST00000512665 Q6ZN92 141 aa5.4□□□□□ -1.54
NEDD9-213ENST00000512665 BAGE3Q86Y29 109 aa5.4□□□□□ -1.54
NEDD9-213ENST00000512665 KRTAP13-1Q8IUC0 172 aa5.4□□□□□ -1.54
NEDD9-213ENST00000512665 LINC01561Q8N1V8 128 aa5.4□□□□□ -1.54
NEDD9-213ENST00000512665 SCGB3A1Q96QR1 104 aa5.4□□□□□ -1.54
NEDD9-213ENST00000512665 VCX2Q9H322 139 aa5.4□□□□□ -1.54
NEDD9-213ENST00000512665 SERF1AO75920 110 aa5.39□□□□□ -1.55
NEDD9-213ENST00000512665 ATP5LO75964 103 aa5.39□□□□□ -1.55
NEDD9-213ENST00000512665 LBHQ53QV2 105 aaPredicted RBP5.39□□□□□ -1.55
NEDD9-213ENST00000512665 RNASE13Q5GAN3 156 aaKnown RBP5.39□□□□□ -1.55
NEDD9-213ENST00000512665 C9orf129Q5T035 196 aaKnown RBP5.39□□□□□ -1.55
NEDD9-213ENST00000512665 TEX43Q6ZNM6 134 aa5.39□□□□□ -1.55
NEDD9-213ENST00000512665 CST9LQ9H4G1 147 aa5.39□□□□□ -1.55
NEDD9-213ENST00000512665 C6orf48Q9UBA6 75 aa5.39□□□□□ -1.55
NEDD9-213ENST00000512665 IGLV8-61A0A075B6I0 122 aa5.38□□□□□ -1.55
NEDD9-213ENST00000512665 TRAV13-1A0A0B4J241 112 aa5.38□□□□□ -1.55
NEDD9-213ENST00000512665 IFITM10A6NMD0 228 aa5.38□□□□□ -1.55
NEDD9-213ENST00000512665 HSBP1O75506 76 aa5.38□□□□□ -1.55
NEDD9-213ENST00000512665 PMVKQ15126 192 aa5.38□□□□□ -1.55
NEDD9-213ENST00000512665 C10orf25Q5T742 122 aa5.38□□□□□ -1.55
NEDD9-213ENST00000512665 C2orf88Q9BSF0 95 aa5.38□□□□□ -1.55
NEDD9-213ENST00000512665 TP73-AS1Q9UF72 201 aa5.38□□□□□ -1.55
NEDD9-213ENST00000512665 NDUFC2-KCTD14E9PQ53 114 aa5.37□□□□□ -1.55
NEDD9-213ENST00000512665 SEC11AP67812 179 aa5.37□□□□□ -1.55
NEDD9-213ENST00000512665 PACRGQ96M98 296 aaPredicted RBP5.37□□□□□ -1.55
NEDD9-213ENST00000512665 NDUFA12Q9UI09 145 aa5.37□□□□□ -1.55
NEDD9-213ENST00000512665 C22orf24Q9Y442 160 aa5.37□□□□□ -1.55
NEDD9-213ENST00000512665 IGLV5-45A0A087WSX0 123 aa5.36□□□□□ -1.55
NEDD9-213ENST00000512665 TRAV12-1A0A0B4J245 112 aa5.36□□□□□ -1.55
NEDD9-213ENST00000512665 TINCRA0A1B0GVN0 87 aa5.36□□□□□ -1.55
NEDD9-213ENST00000512665 A6NJY4 79 aa5.36□□□□□ -1.55
NEDD9-213ENST00000512665 PMCHL1Q16048 86 aa5.36□□□□□ -1.55
NEDD9-213ENST00000512665 ZC2HC1BQ5TFG8 222 aa5.36□□□□□ -1.55
NEDD9-213ENST00000512665 C5orf38Q86SI9 138 aa5.36□□□□□ -1.55
NEDD9-213ENST00000512665 TRBV30A0A0K0K1B3 111 aa5.35□□□□□ -1.55
NEDD9-213ENST00000512665 HERVK_113P63121 156 aa5.35□□□□□ -1.55
NEDD9-213ENST00000512665 UNQ6190/PRO20217Q6UXQ8 127 aa5.35□□□□□ -1.55
NEDD9-213ENST00000512665 FAM19A2Q8N3H0 131 aa5.35□□□□□ -1.55
NEDD9-213ENST00000512665 ORAOV1Q8WV07 137 aa5.35□□□□□ -1.55
NEDD9-213ENST00000512665 IFI27L1Q96BM0 104 aa5.35□□□□□ -1.55
NEDD9-213ENST00000512665 LEPROTL1O95214 131 aa5.34□□□□□ -1.55
NEDD9-213ENST00000512665 IGLC3P0DOY3 106 aa5.34□□□□□ -1.55
NEDD9-213ENST00000512665 KRTAP20-1Q3LI63 56 aa5.34□□□□□ -1.55
NEDD9-213ENST00000512665 PCOTHQ58A44 107 aa5.34□□□□□ -1.55
NEDD9-213ENST00000512665 COX6B2Q6YFQ2 88 aa5.34□□□□□ -1.55
NEDD9-213ENST00000512665 KRTAP9-8Q9BYQ0 159 aa5.34□□□□□ -1.55
NEDD9-213ENST00000512665 LINC00846Q9NV44 126 aa5.34□□□□□ -1.55
NEDD9-213ENST00000512665 HSPB8Q9UJY1 196 aa5.34□□□□□ -1.55
NEDD9-213ENST00000512665 SPINK1P00995 79 aa5.33□□□□□ -1.56
NEDD9-213ENST00000512665 KIAA0087Q14695 138 aa5.33□□□□□ -1.56
NEDD9-213ENST00000512665 MRPL55Q7Z7F7 128 aaKnown RBP5.33□□□□□ -1.56
NEDD9-213ENST00000512665 C3orf22Q8N5N4 141 aa5.33□□□□□ -1.56
NEDD9-213ENST00000512665 CDKN2A-AS1Q9UH64 79 aa5.33□□□□□ -1.56
NEDD9-213ENST00000512665 GEMIN7Q9H840 131 aaKnown RBP5.32□□□□□ -1.56
NEDD9-213ENST00000512665 IGLV5-39A0A0G2JS06 123 aa5.31□□□□□ -1.56
NEDD9-213ENST00000512665 F8VRH5 84 aa5.31□□□□□ -1.56
NEDD9-213ENST00000512665 RPS29P62273 56 aaKnown RBP5.31□□□□□ -1.56
NEDD9-213ENST00000512665 C11orf86A6NJI1 115 aa5.3□□□□□ -1.56
NEDD9-213ENST00000512665 SMIM1B2RUZ4 78 aa5.3□□□□□ -1.56
NEDD9-213ENST00000512665 ZNF22P17026 224 aaPredicted RBP5.3□□□□□ -1.56
NEDD9-213ENST00000512665 UBE2AP49459 152 aa5.3□□□□□ -1.56
NEDD9-213ENST00000512665 NDUFA6P56556 154 aa5.3□□□□□ -1.56
NEDD9-213ENST00000512665 Q8IZM0 81 aa5.3□□□□□ -1.56
NEDD9-213ENST00000512665 LINC00469Q8N7U9 141 aa5.3□□□□□ -1.56
NEDD9-213ENST00000512665 CHTOPQ9Y3Y2 248 aaKnown RBP5.3□□□□□ -1.56
NEDD9-213ENST00000512665 H3BRM9 83 aa5.29□□□□□ -1.56
NEDD9-213ENST00000512665 FABP4P15090 132 aa5.29□□□□□ -1.56
NEDD9-213ENST00000512665 MAP1LC3CQ9BXW4 147 aa5.29□□□□□ -1.56
NEDD9-213ENST00000512665 SYS1-DBNDD2H3BUS1 97 aa5.28□□□□□ -1.56
NEDD9-213ENST00000512665 PET117Q6UWS5 81 aa5.28□□□□□ -1.56
NEDD9-213ENST00000512665 HIST3H2BBQ8N257 126 aa5.28□□□□□ -1.56
NEDD9-213ENST00000512665 TMEM223A0PJW6 202 aa5.27□□□□□ -1.57
NEDD9-213ENST00000512665 C5orf52A6NGY3 159 aa5.27□□□□□ -1.57
NEDD9-213ENST00000512665 PLNP26678 52 aa5.27□□□□□ -1.57
NEDD9-213ENST00000512665 CXCL5P42830 114 aa5.27□□□□□ -1.57
NEDD9-213ENST00000512665 KRTAP19-6Q3LI70 58 aa5.27□□□□□ -1.57
NEDD9-213ENST00000512665 LINC01545Q5VT33 79 aa5.27□□□□□ -1.57
NEDD9-213ENST00000512665 Q8N377 158 aa5.27□□□□□ -1.57
NEDD9-213ENST00000512665 DPM2O94777 84 aa5.26□□□□□ -1.57
NEDD9-213ENST00000512665 S100A6P06703 90 aa5.26□□□□□ -1.57
NEDD9-213ENST00000512665 C3orf79P0CE67 100 aa5.26□□□□□ -1.57
NEDD9-213ENST00000512665 C6orf226Q5I0X4 101 aa5.26□□□□□ -1.57
NEDD9-213ENST00000512665 Q8NBF4 154 aa5.26□□□□□ -1.57
NEDD9-213ENST00000512665 COX7B2Q8TF08 81 aa5.26□□□□□ -1.57
NEDD9-213ENST00000512665 PLEKHB2Q96CS7 222 aa5.26□□□□□ -1.57
NEDD9-213ENST00000512665 LINC00167Q96N53 147 aa5.26□□□□□ -1.57
NEDD9-213ENST00000512665 HIST1H2BLQ99880 126 aa5.26□□□□□ -1.57
NEDD9-213ENST00000512665 MUC12Q9UKN1 5478 aa5.26□□□□□ -1.57
NEDD9-213ENST00000512665 SLC25A20O43772 301 aa5.25□□□□□ -1.57
NEDD9-213ENST00000512665 PRSS2P07478 247 aa5.25□□□□□ -1.57
NEDD9-213ENST00000512665 SPINK8P0C7L1 97 aa5.25□□□□□ -1.57
NEDD9-213ENST00000512665 TMEM170BQ5T4T1 132 aa5.25□□□□□ -1.57
NEDD9-213ENST00000512665 SFTA2Q6UW10 78 aa5.25□□□□□ -1.57
NEDD9-213ENST00000512665 RPL37AP8A6NKH3 93 aa5.24□□□□□ -1.57
NEDD9-213ENST00000512665 IGKCP01834 107 aa5.24□□□□□ -1.57
NEDD9-213ENST00000512665 AKR1D1P51857 326 aa5.24□□□□□ -1.57
NEDD9-213ENST00000512665 CKS1BP61024 79 aa5.24□□□□□ -1.57
NEDD9-213ENST00000512665 C2orf82Q6UX34 121 aa5.24□□□□□ -1.57
NEDD9-213ENST00000512665 SNRPEP62304 92 aaKnown RBP5.23□□□□□ -1.57
NEDD9-213ENST00000512665 ZNF625Q96I27 306 aaPredicted RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms