RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 KNDC1Q76NI1 1749 aa-0.06□□□□□ -2.42
CHD1-207ENST00000511628 PEA15Q15121 130 aa-0.06□□□□□ -2.42
CHD1-207ENST00000511628 KLK9Q2XQG4 91 aa-0.06□□□□□ -2.42
CHD1-207ENST00000511628 PYY3Q5JQD4 70 aa-0.06□□□□□ -2.42
CHD1-207ENST00000511628 MRPL34Q9BQ48 92 aaKnown RBP-0.06□□□□□ -2.42
CHD1-207ENST00000511628 Q9H521 79 aa-0.06□□□□□ -2.42
CHD1-207ENST00000511628 CDKN2A-AS1Q9UH64 79 aa-0.06□□□□□ -2.42
CHD1-207ENST00000511628 FANCAO15360 1455 aa-0.06□□□□□ -2.42
CHD1-207ENST00000511628 ZFHX3Q15911 3703 aa-0.06□□□□□ -2.42
CHD1-207ENST00000511628 SHPRHQ149N8 1683 aa-0.07□□□□□ -2.42
CHD1-207ENST00000511628 MUC2Q02817 5179 aa-0.07□□□□□ -2.42
CHD1-207ENST00000511628 ATP10BO94823 1461 aa-0.07□□□□□ -2.42
CHD1-207ENST00000511628 NKTRP30414 1462 aaKnown RBP-0.07□□□□□ -2.42
CHD1-207ENST00000511628 IGLC2P0DOY2 106 aa-0.07□□□□□ -2.42
CHD1-207ENST00000511628 IGLC3P0DOY3 106 aa-0.07□□□□□ -2.42
CHD1-207ENST00000511628 SPRR2BP35325 72 aa-0.07□□□□□ -2.42
CHD1-207ENST00000511628 RPL38P63173 70 aaKnown RBP-0.07□□□□□ -2.42
CHD1-207ENST00000511628 NMSQ5H8A3 153 aa-0.07□□□□□ -2.42
CHD1-207ENST00000511628 SNHG12Q9BXW3 62 aa-0.07□□□□□ -2.42
CHD1-207ENST00000511628 SAMD9Q5K651 1589 aa-0.07□□□□□ -2.42
CHD1-207ENST00000511628 LPAP08519 4548 aa-0.08□□□□□ -2.42
CHD1-207ENST00000511628 NRXN1Q9ULB1 1477 aa-0.08□□□□□ -2.42
CHD1-207ENST00000511628 TARBP1Q13395 1621 aaKnown RBP-0.08□□□□□ -2.42
CHD1-207ENST00000511628 MYH4Q9Y623 1939 aa-0.08□□□□□ -2.42
CHD1-207ENST00000511628 CYB5AP00167 134 aa-0.08□□□□□ -2.42
CHD1-207ENST00000511628 HMGN2P05204 90 aaKnown RBP-0.08□□□□□ -2.42
CHD1-207ENST00000511628 PLGLAQ15195 96 aa-0.08□□□□□ -2.42
CHD1-207ENST00000511628 DEFB112Q30KQ8 113 aa-0.08□□□□□ -2.42
CHD1-207ENST00000511628 H1FX-AS1Q4G0G2 97 aa-0.08□□□□□ -2.42
CHD1-207ENST00000511628 HIGD1BQ9P298 99 aa-0.08□□□□□ -2.42
CHD1-207ENST00000511628 RABAC1Q9UI14 185 aa-0.08□□□□□ -2.42
CHD1-207ENST00000511628 UBE2D4Q9Y2X8 147 aa-0.08□□□□□ -2.42
CHD1-207ENST00000511628 V9GYS6 101 aa-0.08□□□□□ -2.42
CHD1-207ENST00000511628 FMN2Q9NZ56 1722 aa-0.08□□□□□ -2.42
CHD1-207ENST00000511628 FLNBO75369 2602 aaKnown RBP-0.08□□□□□ -2.42
CHD1-207ENST00000511628 STAB1Q9NY15 2570 aa-0.08□□□□□ -2.42
CHD1-207ENST00000511628 PAPPA2Q9BXP8 1791 aa-0.09□□□□□ -2.42
CHD1-207ENST00000511628 ABCC10Q5T3U5 1492 aa-0.09□□□□□ -2.42
CHD1-207ENST00000511628 UBR3Q6ZT12 1888 aa-0.09□□□□□ -2.42
CHD1-207ENST00000511628 ALMS1Q8TCU4 4167 aa-0.09□□□□□ -2.42
CHD1-207ENST00000511628 KIAA1551Q9HCM1 1747 aa-0.09□□□□□ -2.42
CHD1-207ENST00000511628 MARF1Q9Y4F3 1742 aaKnown RBP-0.09□□□□□ -2.42
CHD1-207ENST00000511628 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.09□□□□□ -2.42
CHD1-207ENST00000511628 HEPN1Q6WQI6 88 aa-0.09□□□□□ -2.42
CHD1-207ENST00000511628 COX6B2Q6YFQ2 88 aa-0.09□□□□□ -2.42
CHD1-207ENST00000511628 C9orf62Q8N4C0 152 aa-0.09□□□□□ -2.42
CHD1-207ENST00000511628 ZANQ9Y493 2812 aa-0.09□□□□□ -2.42
CHD1-207ENST00000511628 KIF20BQ96Q89 1820 aa-0.09□□□□□ -2.42
CHD1-207ENST00000511628 CLTCQ00610 1675 aaKnown RBP-0.09□□□□□ -2.42
CHD1-207ENST00000511628 CCNB3Q8WWL7 1395 aa-0.09□□□□□ -2.42
CHD1-207ENST00000511628 SETXQ7Z333 2677 aaKnown RBP-0.1□□□□□ -2.42
CHD1-207ENST00000511628 MUC12Q9UKN1 5478 aa-0.1□□□□□ -2.42
CHD1-207ENST00000511628 HSPG2P98160 4391 aa-0.1□□□□□ -2.42
CHD1-207ENST00000511628 FAT2Q9NYQ8 4349 aa-0.1□□□□□ -2.43
CHD1-207ENST00000511628 TROQ12816 1431 aaPredicted RBP-0.1□□□□□ -2.43
CHD1-207ENST00000511628 A0A1B0GUT8 65 aa-0.1□□□□□ -2.43
CHD1-207ENST00000511628 PVALEFA0A1B0GWK0 134 aa-0.1□□□□□ -2.43
CHD1-207ENST00000511628 SLIT1O75093 1534 aa-0.1□□□□□ -2.43
CHD1-207ENST00000511628 PLIN4Q96Q06 1357 aa-0.1□□□□□ -2.43
CHD1-207ENST00000511628 MON2Q7Z3U7 1717 aa-0.1□□□□□ -2.43
CHD1-207ENST00000511628 PCNX1Q96RV3 2341 aa-0.1□□□□□ -2.43
CHD1-207ENST00000511628 C5P01031 1676 aa-0.11□□□□□ -2.43
CHD1-207ENST00000511628 COL14A1Q05707 1796 aaKnown RBP-0.11□□□□□ -2.43
CHD1-207ENST00000511628 COX7BP24311 80 aa-0.11□□□□□ -2.43
CHD1-207ENST00000511628 SNRPFP62306 86 aaKnown RBP-0.11□□□□□ -2.43
CHD1-207ENST00000511628 DEFB135Q30KP9 77 aa-0.11□□□□□ -2.43
CHD1-207ENST00000511628 C20orf78Q9BR46 151 aa-0.11□□□□□ -2.43
CHD1-207ENST00000511628 CRYBG1Q9Y4K1 1723 aa-0.11□□□□□ -2.43
CHD1-207ENST00000511628 LRP2P98164 4655 aa-0.11□□□□□ -2.43
CHD1-207ENST00000511628 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.12□□□□□ -2.433e-17■■■■■ 34.1
CHD1-207ENST00000511628 KNL1Q8NG31 2342 aa-0.12□□□□□ -2.43
CHD1-207ENST00000511628 IQCF6A8MYZ5 107 aa-0.12□□□□□ -2.43
CHD1-207ENST00000511628 NDUFB1O75438 58 aa-0.12□□□□□ -2.43
CHD1-207ENST00000511628 ACYP1P07311 99 aa-0.12□□□□□ -2.43
CHD1-207ENST00000511628 KRTAP6-1Q3LI64 71 aa-0.12□□□□□ -2.43
CHD1-207ENST00000511628 KMT2AQ03164 3969 aa-0.13□□□□□ -2.43
CHD1-207ENST00000511628 BSNQ9UPA5 3926 aa-0.13□□□□□ -2.43
CHD1-207ENST00000511628 MYMXA0A1B0GTQ4 84 aa-0.13□□□□□ -2.43
CHD1-207ENST00000511628 LINC00643Q86TS7 51 aa-0.13□□□□□ -2.43
CHD1-207ENST00000511628 S100A16Q96FQ6 103 aaKnown RBP-0.13□□□□□ -2.43
CHD1-207ENST00000511628 GAFA1Q96PS6 74 aa-0.13□□□□□ -2.43
CHD1-207ENST00000511628 PDE4DIPQ5VU43 2346 aa-0.13□□□□□ -2.43
CHD1-207ENST00000511628 COL6A3P12111 3177 aa-0.13□□□□□ -2.43
CHD1-207ENST00000511628 TNXBP22105 4242 aa-0.13□□□□□ -2.43
CHD1-207ENST00000511628 CEP162Q5TB80 1403 aa-0.13□□□□□ -2.43
CHD1-207ENST00000511628 TENM2Q9NT68 2774 aa-0.14□□□□□ -2.43
CHD1-207ENST00000511628 ATP7BP35670 1465 aa-0.14□□□□□ -2.43
CHD1-207ENST00000511628 MAGI2Q86UL8 1455 aa-0.14□□□□□ -2.43
CHD1-207ENST00000511628 H0YGG7 62 aa-0.14□□□□□ -2.43
CHD1-207ENST00000511628 WFDC13Q8IUB5 93 aa-0.14□□□□□ -2.43
CHD1-207ENST00000511628 RGPD8O14715 1765 aaPredicted RBP-0.14□□□□□ -2.43
CHD1-207ENST00000511628 BCORQ6W2J9 1755 aa-0.14□□□□□ -2.43
CHD1-207ENST00000511628 RGPD5Q99666 1765 aa-0.14□□□□□ -2.43
CHD1-207ENST00000511628 LRRC9Q6ZRR7 1453 aa-0.15□□□□□ -2.43
CHD1-207ENST00000511628 PKD1L3Q7Z443 1732 aa-0.15□□□□□ -2.43
CHD1-207ENST00000511628 ANKRD26Q9UPS8 1709 aa-0.15□□□□□ -2.43
CHD1-207ENST00000511628 STAB2Q8WWQ8 2551 aa-0.15□□□□□ -2.43
CHD1-207ENST00000511628 KANTRA0A1W2PQU2 76 aa-0.15□□□□□ -2.43
CHD1-207ENST00000511628 CEBPZOSA8MTT3 80 aa-0.15□□□□□ -2.43
CHD1-207ENST00000511628 K7EP34 96 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms