RNA–Protein interactions for RNA: ENST00000511175.1

SUB1-208, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 2

Gene SUB1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-208ENST00000511175 KIAA0556O60303 1618 aa0.47□□□□□ -2.33
SUB1-208ENST00000511175 K7EQZ3 153 aa0.47□□□□□ -2.33
SUB1-208ENST00000511175 AKAP6Q13023 2319 aa0.47□□□□□ -2.33
SUB1-208ENST00000511175 RRBP1Q9P2E9 1410 aaKnown RBP0.47□□□□□ -2.33
SUB1-208ENST00000511175 SPTBN1Q01082 2364 aaKnown RBP0.46□□□□□ -2.34
SUB1-208ENST00000511175 UNC79Q9P2D8 2635 aa0.46□□□□□ -2.34
SUB1-208ENST00000511175 CEBPZOSA8MTT3 80 aa0.46□□□□□ -2.34
SUB1-208ENST00000511175 I3L3M4 83 aa0.46□□□□□ -2.34
SUB1-208ENST00000511175 SPINK4O60575 86 aa0.46□□□□□ -2.34
SUB1-208ENST00000511175 BVES-AS1Q5T3Y7 98 aa0.46□□□□□ -2.34
SUB1-208ENST00000511175 Q5VSD8 79 aa0.46□□□□□ -2.34
SUB1-208ENST00000511175 NAV2Q8IVL1 2488 aa0.45□□□□□ -2.34
SUB1-208ENST00000511175 LRRC37AA6NMS7 1700 aa0.45□□□□□ -2.34
SUB1-208ENST00000511175 SPTY2D1-AS1A0A0U1RR47 76 aa0.45□□□□□ -2.34
SUB1-208ENST00000511175 HMGA1P17096 107 aaKnown RBP0.45□□□□□ -2.34
SUB1-208ENST00000511175 DEFB112Q30KQ8 113 aa0.45□□□□□ -2.34
SUB1-208ENST00000511175 PKDREJQ9NTG1 2253 aa0.45□□□□□ -2.34
SUB1-208ENST00000511175 IGF2RP11717 2491 aa0.45□□□□□ -2.34
SUB1-208ENST00000511175 MAP3K1Q13233 1512 aa0.44□□□□□ -2.34
SUB1-208ENST00000511175 H3BUT2 72 aa0.44□□□□□ -2.34
SUB1-208ENST00000511175 CCL22O00626 93 aa0.44□□□□□ -2.34
SUB1-208ENST00000511175 DEFB121Q5J5C9 76 aa0.44□□□□□ -2.34
SUB1-208ENST00000511175 USP32Q8NFA0 1604 aa0.44□□□□□ -2.34
SUB1-208ENST00000511175 PTPN13Q12923 2485 aa0.44□□□□□ -2.34
SUB1-208ENST00000511175 CFAP74Q9C0B2 1584 aa0.44□□□□□ -2.34
SUB1-208ENST00000511175 SUPT6HQ7KZ85 1726 aaKnown RBP0.44□□□□□ -2.34
SUB1-208ENST00000511175 NKTRP30414 1462 aaKnown RBP0.43□□□□□ -2.34
SUB1-208ENST00000511175 DEFB109BQ30KR1 87 aa0.43□□□□□ -2.34
SUB1-208ENST00000511175 ATP5EP2Q5VTU8 51 aa0.43□□□□□ -2.34
SUB1-208ENST00000511175 U3KQA8 63 aa0.43□□□□□ -2.34
SUB1-208ENST00000511175 TNCP24821 2201 aa0.43□□□□□ -2.34
SUB1-208ENST00000511175 USF3Q68DE3 2245 aa0.43□□□□□ -2.34
SUB1-208ENST00000511175 CLIP1P30622 1438 aa0.43□□□□□ -2.34
SUB1-208ENST00000511175 RGPD1P0DJD0 1748 aa0.43□□□□□ -2.34
SUB1-208ENST00000511175 PTPRQQ9UMZ3 2332 aa0.43□□□□□ -2.34
SUB1-208ENST00000511175 IGSF10Q6WRI0 2623 aa0.43□□□□□ -2.34
SUB1-208ENST00000511175 ABCC1P33527 1531 aa0.43□□□□□ -2.34
SUB1-208ENST00000511175 LRRC7Q96NW7 1537 aa0.43□□□□□ -2.34
SUB1-208ENST00000511175 CEP170BQ9Y4F5 1589 aaPredicted RBP0.42□□□□□ -2.34
SUB1-208ENST00000511175 CPSF4LA6NMK7 179 aaKnown RBP0.42□□□□□ -2.34
SUB1-208ENST00000511175 SPRR1AP35321 89 aa0.42□□□□□ -2.34
SUB1-208ENST00000511175 GAFA1Q96PS6 74 aa0.42□□□□□ -2.34
SUB1-208ENST00000511175 OTOGQ6ZRI0 2925 aa0.42□□□□□ -2.34
SUB1-208ENST00000511175 GVINP1Q7Z2Y8 2422 aa0.42□□□□□ -2.34
SUB1-208ENST00000511175 NCOA2Q15596 1464 aa0.41□□□□□ -2.34
SUB1-208ENST00000511175 PKD1L3Q7Z443 1732 aa0.41□□□□□ -2.34
SUB1-208ENST00000511175 SPTA1P02549 2419 aa0.41□□□□□ -2.34
SUB1-208ENST00000511175 TRAV21A0A0B4J279 112 aa0.41□□□□□ -2.34
SUB1-208ENST00000511175 SPRR1BP22528 89 aa0.41□□□□□ -2.34
SUB1-208ENST00000511175 COX7BP24311 80 aa0.41□□□□□ -2.34
SUB1-208ENST00000511175 C18orf32Q8TCD1 76 aa0.41□□□□□ -2.34
SUB1-208ENST00000511175 URB2Q14146 1524 aaKnown RBP0.41□□□□□ -2.34
SUB1-208ENST00000511175 SYNE2Q8WXH0 6885 aaKnown RBP0.41□□□□□ -2.34
SUB1-208ENST00000511175 ABCA8O94911 1581 aa0.4□□□□□ -2.34
SUB1-208ENST00000511175 ZNF831Q5JPB2 1677 aa0.4□□□□□ -2.34
SUB1-208ENST00000511175 ANKARQ7Z5J8 1434 aa0.4□□□□□ -2.34
SUB1-208ENST00000511175 A0A087WXM4 84 aa0.4□□□□□ -2.35
SUB1-208ENST00000511175 IFI27P40305 119 aaPredicted RBP0.4□□□□□ -2.35
SUB1-208ENST00000511175 COX6B2Q6YFQ2 88 aa0.4□□□□□ -2.35
SUB1-208ENST00000511175 WFDC9Q8NEX5 89 aa0.4□□□□□ -2.35
SUB1-208ENST00000511175 PPRC1Q5VV67 1664 aaKnown RBP0.4□□□□□ -2.35
SUB1-208ENST00000511175 CHD6Q8TD26 2715 aa0.39□□□□□ -2.35
SUB1-208ENST00000511175 PTPN23Q9H3S7 1636 aa0.39□□□□□ -2.35
SUB1-208ENST00000511175 ANKRD36A6QL64 1941 aa0.39□□□□□ -2.35
SUB1-208ENST00000511175 KRTAP21-1Q3LI58 79 aa0.39□□□□□ -2.35
SUB1-208ENST00000511175 DEFB105AQ8NG35 78 aa0.39□□□□□ -2.35
SUB1-208ENST00000511175 FXYD6Q9H0Q3 95 aa0.39□□□□□ -2.35
SUB1-208ENST00000511175 RGPD2P0DJD1 1756 aa0.39□□□□□ -2.35
SUB1-208ENST00000511175 MACF1Q9UPN3 7388 aaKnown RBP0.39□□□□□ -2.35
SUB1-208ENST00000511175 TENM4Q6N022 2769 aa0.39□□□□□ -2.35
SUB1-208ENST00000511175 MAGI3Q5TCQ9 1506 aa0.38□□□□□ -2.35
SUB1-208ENST00000511175 PIK3C2BO00750 1634 aa0.38□□□□□ -2.35
SUB1-208ENST00000511175 QSER1Q2KHR3 1735 aa0.38□□□□□ -2.35
SUB1-208ENST00000511175 ATRQ13535 2644 aa0.38□□□□□ -2.35
SUB1-208ENST00000511175 UMAD1C9J7I0 102 aa0.38□□□□□ -2.35
SUB1-208ENST00000511175 SMIM13P0DJ93 91 aa0.38□□□□□ -2.35
SUB1-208ENST00000511175 MRPL34Q9BQ48 92 aaKnown RBP0.38□□□□□ -2.35
SUB1-208ENST00000511175 CDKN2A-AS1Q9UH64 79 aa0.38□□□□□ -2.35
SUB1-208ENST00000511175 FMN2Q9NZ56 1722 aa0.38□□□□□ -2.35
SUB1-208ENST00000511175 MUC5ACP98088 5654 aa0.38□□□□□ -2.35
SUB1-208ENST00000511175 UBR3Q6ZT12 1888 aa0.37□□□□□ -2.35
SUB1-208ENST00000511175 ABCA2Q9BZC7 2435 aa0.37□□□□□ -2.35
SUB1-208ENST00000511175 UBR5O95071 2799 aaPredicted RBP0.37□□□□□ -2.35
SUB1-208ENST00000511175 CCDC88BA6NC98 1476 aa0.37□□□□□ -2.35
SUB1-208ENST00000511175 CD163L1Q9NR16 1453 aa0.37□□□□□ -2.35
SUB1-208ENST00000511175 HEPN1Q6WQI6 88 aa0.37□□□□□ -2.35
SUB1-208ENST00000511175 APLNQ9ULZ1 77 aa0.37□□□□□ -2.35
SUB1-208ENST00000511175 NCOR2Q9Y618 2525 aa0.37□□□□□ -2.35
SUB1-208ENST00000511175 MDN1Q9NU22 5596 aa0.37□□□□□ -2.35
SUB1-208ENST00000511175 REV3LO60673 3130 aa0.37□□□□□ -2.35
SUB1-208ENST00000511175 CHD8Q9HCK8 2581 aa0.37□□□□□ -2.35
SUB1-208ENST00000511175 VWFP04275 2813 aa0.37□□□□□ -2.35
SUB1-208ENST00000511175 KIF20BQ96Q89 1820 aa0.36□□□□□ -2.35
SUB1-208ENST00000511175 POLR1AO95602 1720 aaPredicted RBP0.36□□□□□ -2.35
SUB1-208ENST00000511175 SYNE1Q8NF91 8797 aaKnown RBP0.36□□□□□ -2.35
SUB1-208ENST00000511175 LCE6AA0A183 80 aa0.36□□□□□ -2.35
SUB1-208ENST00000511175 IFI6P09912 130 aa0.36□□□□□ -2.35
SUB1-208ENST00000511175 FSIP2Q5CZC0 6907 aa0.36□□□□□ -2.35
SUB1-208ENST00000511175 NCOR1O75376 2440 aa0.35□□□□□ -2.35
SUB1-208ENST00000511175 DMBT1Q9UGM3 2413 aaPredicted RBP0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 187.8 ms