RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 COX6A2Q02221 97 aa4.46□□□□□ -1.7
TRAPPC11-206ENST00000509857 SS18Q15532 418 aa4.46□□□□□ -1.7
TRAPPC11-206ENST00000509857 RNASE13Q5GAN3 156 aaKnown RBP4.46□□□□□ -1.7
TRAPPC11-206ENST00000509857 C11orf68Q9H3H3 251 aaKnown RBP4.46□□□□□ -1.7
TRAPPC11-206ENST00000509857 PRO0461Q9UI25 63 aa4.46□□□□□ -1.7
TRAPPC11-206ENST00000509857 OTOGQ6ZRI0 2925 aa4.46□□□□□ -1.7
TRAPPC11-206ENST00000509857 HIVEP1P15822 2718 aa4.46□□□□□ -1.7
TRAPPC11-206ENST00000509857 IGHV3-64A0A075B6Q5 118 aa4.45□□□□□ -1.7
TRAPPC11-206ENST00000509857 LOC100131303A0A0U1RQF7 123 aa4.45□□□□□ -1.7
TRAPPC11-206ENST00000509857 LINC00959A0A1B0GUT2 108 aa4.45□□□□□ -1.7
TRAPPC11-206ENST00000509857 IBA57-AS1B1ANH7 110 aa4.45□□□□□ -1.7
TRAPPC11-206ENST00000509857 G3V4G9 280 aa4.45□□□□□ -1.7
TRAPPC11-206ENST00000509857 DEFB135Q30KP9 77 aa4.45□□□□□ -1.7
TRAPPC11-206ENST00000509857 LELP1Q5T871 98 aa4.45□□□□□ -1.7
TRAPPC11-206ENST00000509857 Q8IZM0 81 aa4.45□□□□□ -1.7
TRAPPC11-206ENST00000509857 LINC00308Q8TCZ7 52 aa4.45□□□□□ -1.7
TRAPPC11-206ENST00000509857 COX7B2Q8TF08 81 aa4.45□□□□□ -1.7
TRAPPC11-206ENST00000509857 NAA38Q9BRA0 125 aaKnown RBP4.45□□□□□ -1.7
TRAPPC11-206ENST00000509857 ICOSQ9Y6W8 199 aa4.45□□□□□ -1.7
TRAPPC11-206ENST00000509857 IGLV4-60A0A075B6I1 120 aa4.44□□□□□ -1.7
TRAPPC11-206ENST00000509857 LOC107984156A0A0G2JMH3 177 aa4.44□□□□□ -1.7
TRAPPC11-206ENST00000509857 PANO1I0J062 215 aa4.44□□□□□ -1.7
TRAPPC11-206ENST00000509857 ATXN8Q156A1 80 aa4.44□□□□□ -1.7
TRAPPC11-206ENST00000509857 MEIG1Q5JSS6 88 aa4.44□□□□□ -1.7
TRAPPC11-206ENST00000509857 ARL17AQ8IVW1 177 aa4.44□□□□□ -1.7
TRAPPC11-206ENST00000509857 TRAV13-2A0A0B4J235 113 aa4.43□□□□□ -1.7
TRAPPC11-206ENST00000509857 SCGB1C2P0DMR2 95 aa4.43□□□□□ -1.7
TRAPPC11-206ENST00000509857 COX17Q14061 63 aa4.43□□□□□ -1.7
TRAPPC11-206ENST00000509857 TRAV8-4A0A0B4J246 113 aa4.42□□□□□ -1.7
TRAPPC11-206ENST00000509857 H3BT86 120 aa4.42□□□□□ -1.7
TRAPPC11-206ENST00000509857 ZNF861PO60384 105 aa4.42□□□□□ -1.7
TRAPPC11-206ENST00000509857 TCL1BO95988 128 aa4.42□□□□□ -1.7
TRAPPC11-206ENST00000509857 PSMB2P49721 201 aa4.42□□□□□ -1.7
TRAPPC11-206ENST00000509857 TEN1Q86WV5 123 aa4.42□□□□□ -1.7
TRAPPC11-206ENST00000509857 C3orf56Q8N813 242 aa4.42□□□□□ -1.7
TRAPPC11-206ENST00000509857 CARD19Q96LW7 228 aa4.42□□□□□ -1.7
TRAPPC11-206ENST00000509857 TEP1Q99973 2627 aaKnown RBP4.42□□□□□ -1.7
TRAPPC11-206ENST00000509857 ATRQ13535 2644 aa4.42□□□□□ -1.7
TRAPPC11-206ENST00000509857 TMEM262E9PQX1 116 aa4.41□□□□□ -1.7
TRAPPC11-206ENST00000509857 PPDPFLQ8WWR9 84 aa4.41□□□□□ -1.7
TRAPPC11-206ENST00000509857 CUBNO60494 3623 aa4.4□□□□□ -1.71
TRAPPC11-206ENST00000509857 TRBV10-2A0A0K0K1G8 114 aa4.4□□□□□ -1.71
TRAPPC11-206ENST00000509857 LST1O00453 97 aa4.4□□□□□ -1.71
TRAPPC11-206ENST00000509857 COX7A2LO14548 114 aa4.4□□□□□ -1.71
TRAPPC11-206ENST00000509857 NDUFC2O95298 119 aa4.4□□□□□ -1.71
TRAPPC11-206ENST00000509857 WFDC2Q14508 124 aa4.4□□□□□ -1.71
TRAPPC11-206ENST00000509857 ETDBQ3ZM63 59 aa4.4□□□□□ -1.71
TRAPPC11-206ENST00000509857 LCE3AQ5TA76 89 aa4.4□□□□□ -1.71
TRAPPC11-206ENST00000509857 VPS25Q9BRG1 176 aa4.4□□□□□ -1.71
TRAPPC11-206ENST00000509857 KLK5Q9Y337 293 aaPredicted RBP4.4□□□□□ -1.71
TRAPPC11-206ENST00000509857 A0A096LPF7 62 aa4.39□□□□□ -1.71
TRAPPC11-206ENST00000509857 SLC25A20O43772 301 aa4.39□□□□□ -1.71
TRAPPC11-206ENST00000509857 TRACP01848 142 aa4.39□□□□□ -1.71
TRAPPC11-206ENST00000509857 CRPP02741 224 aa4.39□□□□□ -1.71
TRAPPC11-206ENST00000509857 RPL13AP40429 203 aaKnown RBP4.39□□□□□ -1.71
TRAPPC11-206ENST00000509857 RPL28P46779 137 aaKnown RBP4.39□□□□□ -1.71
TRAPPC11-206ENST00000509857 REG3AQ06141 175 aa4.39□□□□□ -1.71
TRAPPC11-206ENST00000509857 C6orf226Q5I0X4 101 aa4.39□□□□□ -1.71
TRAPPC11-206ENST00000509857 ANKRD29Q8N6D5 301 aa4.39□□□□□ -1.71
TRAPPC11-206ENST00000509857 GVQW2A0A096LPI5 108 aaPredicted RBP4.38□□□□□ -1.71
TRAPPC11-206ENST00000509857 A0A1B0GX51 115 aa4.38□□□□□ -1.71
TRAPPC11-206ENST00000509857 H0YGX0 51 aa4.38□□□□□ -1.71
TRAPPC11-206ENST00000509857 RTL8CO15255 209 aa4.38□□□□□ -1.71
TRAPPC11-206ENST00000509857 ANGP03950 147 aaKnown RBP4.38□□□□□ -1.71
TRAPPC11-206ENST00000509857 KIAA0087Q14695 138 aa4.38□□□□□ -1.71
TRAPPC11-206ENST00000509857 SOSTDC1Q6X4U4 206 aa4.38□□□□□ -1.71
TRAPPC11-206ENST00000509857 C5orf38Q86SI9 138 aa4.38□□□□□ -1.71
TRAPPC11-206ENST00000509857 MIR7-3HGQ8N6C7 128 aa4.38□□□□□ -1.71
TRAPPC11-206ENST00000509857 CHCHD10Q8WYQ3 142 aaPredicted RBP4.38□□□□□ -1.71
TRAPPC11-206ENST00000509857 C9JAW5 83 aa4.37□□□□□ -1.71
TRAPPC11-206ENST00000509857 SCGB1A1P11684 91 aa4.37□□□□□ -1.71
TRAPPC11-206ENST00000509857 XCL1P47992 114 aa4.37□□□□□ -1.71
TRAPPC11-206ENST00000509857 LINC00158P58513 81 aa4.37□□□□□ -1.71
TRAPPC11-206ENST00000509857 CKS1BP61024 79 aa4.37□□□□□ -1.71
TRAPPC11-206ENST00000509857 LYPD5Q6UWN5 251 aa4.37□□□□□ -1.71
TRAPPC11-206ENST00000509857 LINC00269Q8N2A0 174 aa4.37□□□□□ -1.71
TRAPPC11-206ENST00000509857 C15orf53Q8NAA6 179 aa4.37□□□□□ -1.71
TRAPPC11-206ENST00000509857 SND1-IT1Q9HBX3 110 aa4.37□□□□□ -1.71
TRAPPC11-206ENST00000509857 TOMM7Q9P0U1 55 aa4.37□□□□□ -1.71
TRAPPC11-206ENST00000509857 NIPBLQ6KC79 2804 aaeCLIP4.36□□□□□ -1.71
TRAPPC11-206ENST00000509857 CCL18P55774 89 aa4.36□□□□□ -1.71
TRAPPC11-206ENST00000509857 DEFB121Q5J5C9 76 aa4.36□□□□□ -1.71
TRAPPC11-206ENST00000509857 KPRPQ5T749 579 aaPredicted RBP4.36□□□□□ -1.71
TRAPPC11-206ENST00000509857 IGKV3OR2-268A0A0C4DH90 116 aa4.35□□□□□ -1.71
TRAPPC11-206ENST00000509857 FAM240AA0A1B0GVK7 77 aa4.35□□□□□ -1.71
TRAPPC11-206ENST00000509857 H7C2G1 150 aa4.35□□□□□ -1.71
TRAPPC11-206ENST00000509857 DEFB4AO15263 64 aa4.35□□□□□ -1.71
TRAPPC11-206ENST00000509857 LINC01556Q5JQF7 62 aa4.35□□□□□ -1.71
TRAPPC11-206ENST00000509857 DAND5Q8N907 189 aa4.35□□□□□ -1.71
TRAPPC11-206ENST00000509857 FLNBO75369 2602 aaKnown RBP4.35□□□□□ -1.71
TRAPPC11-206ENST00000509857 IGKV2-28A0A075B6P5 120 aa4.34□□□□□ -1.71
TRAPPC11-206ENST00000509857 TRAV10A0A0B4J240 114 aa4.34□□□□□ -1.71
TRAPPC11-206ENST00000509857 H3BQ85 93 aa4.34□□□□□ -1.71
TRAPPC11-206ENST00000509857 IGKV2D-28P01615 120 aa4.34□□□□□ -1.71
TRAPPC11-206ENST00000509857 PRB2P02812 416 aaPredicted RBP4.34□□□□□ -1.71
TRAPPC11-206ENST00000509857 C2orf82Q6UX34 121 aa4.34□□□□□ -1.71
TRAPPC11-206ENST00000509857 UBE2WQ96B02 151 aa4.34□□□□□ -1.71
TRAPPC11-206ENST00000509857 SIGMAR1Q99720 223 aa4.34□□□□□ -1.71
TRAPPC11-206ENST00000509857 TM2D3Q9BRN9 247 aa4.34□□□□□ -1.71
TRAPPC11-206ENST00000509857 TMEM126AQ9H061 195 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms