RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 IGHV4-30-2A0A087WSY4 118 aa6.79□□□□□ -1.32
PDGFRA-207ENST00000509092 LOC100131303A0A0U1RQF7 123 aa6.79□□□□□ -1.32
PDGFRA-207ENST00000509092 NDUFS5O43920 106 aa6.79□□□□□ -1.32
PDGFRA-207ENST00000509092 LINC00612Q8N6U2 182 aa6.79□□□□□ -1.32
PDGFRA-207ENST00000509092 MAP6D1Q9H9H5 199 aa6.79□□□□□ -1.32
PDGFRA-207ENST00000509092 FAM30AQ9NZY2 134 aa6.79□□□□□ -1.32
PDGFRA-207ENST00000509092 J3QKU1 62 aa6.78□□□□□ -1.32
PDGFRA-207ENST00000509092 IGLV6-57P01721 117 aa6.78□□□□□ -1.32
PDGFRA-207ENST00000509092 CELSR2Q9HCU4 2923 aa6.78□□□□□ -1.32
PDGFRA-207ENST00000509092 IGHV4-28A0A0C4DH34 117 aa6.78□□□□□ -1.32
PDGFRA-207ENST00000509092 C4orf48Q5BLP8 95 aa6.78□□□□□ -1.32
PDGFRA-207ENST00000509092 C10orf99Q6UWK7 81 aa6.78□□□□□ -1.32
PDGFRA-207ENST00000509092 KRTAP3-3Q9BYR6 98 aa6.78□□□□□ -1.32
PDGFRA-207ENST00000509092 KRTAP3-2Q9BYR7 98 aa6.78□□□□□ -1.32
PDGFRA-207ENST00000509092 TRGV4A0A0C4DH28 118 aa6.77□□□□□ -1.33
PDGFRA-207ENST00000509092 SMIM29Q86T20 159 aa6.77□□□□□ -1.33
PDGFRA-207ENST00000509092 LINC00269Q8N2A0 174 aa6.77□□□□□ -1.33
PDGFRA-207ENST00000509092 A0A1W2PPR1 153 aa6.77□□□□□ -1.33
PDGFRA-207ENST00000509092 KIAA0087Q14695 138 aa6.77□□□□□ -1.33
PDGFRA-207ENST00000509092 STHQ8IWL8 128 aa6.77□□□□□ -1.33
PDGFRA-207ENST00000509092 PTPN13Q12923 2485 aa6.77□□□□□ -1.33
PDGFRA-207ENST00000509092 CELA1Q9UNI1 258 aa6.76□□□□□ -1.33
PDGFRA-207ENST00000509092 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.76□□□□□ -1.33
PDGFRA-207ENST00000509092 C16orf90A8MZG2 172 aa6.76□□□□□ -1.33
PDGFRA-207ENST00000509092 CCL24O00175 119 aa6.76□□□□□ -1.33
PDGFRA-207ENST00000509092 DIRC1Q969H9 104 aa6.76□□□□□ -1.33
PDGFRA-207ENST00000509092 ABCA2Q9BZC7 2435 aa6.76□□□□□ -1.33
PDGFRA-207ENST00000509092 ABCA12Q86UK0 2595 aa6.75□□□□□ -1.33
PDGFRA-207ENST00000509092 C10orf25Q5T742 122 aa6.75□□□□□ -1.33
PDGFRA-207ENST00000509092 C9orf116Q5BN46 136 aaPredicted RBP6.75□□□□□ -1.33
PDGFRA-207ENST00000509092 UBE2E2Q96LR5 201 aa6.75□□□□□ -1.33
PDGFRA-207ENST00000509092 ESM1Q9NQ30 184 aa6.75□□□□□ -1.33
PDGFRA-207ENST00000509092 IGHV4-30-4P0DP06 118 aa6.74□□□□□ -1.33
PDGFRA-207ENST00000509092 ATP11AUNQ6ZP68 121 aa6.74□□□□□ -1.33
PDGFRA-207ENST00000509092 PHF5AQ7RTV0 110 aaKnown RBP6.74□□□□□ -1.33
PDGFRA-207ENST00000509092 MAP1AP78559 2803 aaPredicted RBP6.74□□□□□ -1.33
PDGFRA-207ENST00000509092 POLQO75417 2590 aa6.74□□□□□ -1.33
PDGFRA-207ENST00000509092 NOP10Q9NPE3 64 aaKnown RBP6.74□□□□□ -1.33
PDGFRA-207ENST00000509092 ASH1LQ9NR48 2969 aaKnown RBP6.73□□□□□ -1.33
PDGFRA-207ENST00000509092 CHKB-CPT1BH3BT56 60 aa6.73□□□□□ -1.33
PDGFRA-207ENST00000509092 APOC4P55056 127 aa6.73□□□□□ -1.33
PDGFRA-207ENST00000509092 HIGD2BQ4VC39 106 aa6.73□□□□□ -1.33
PDGFRA-207ENST00000509092 NBPF19A0A087WUL8 3843 aa6.73□□□□□ -1.33
PDGFRA-207ENST00000509092 FBN2P35556 2912 aa6.73□□□□□ -1.33
PDGFRA-207ENST00000509092 ETDCA0A1B0GVM5 59 aa6.72□□□□□ -1.33
PDGFRA-207ENST00000509092 A6NN06 94 aa6.72□□□□□ -1.33
PDGFRA-207ENST00000509092 IGHV4-59P01825 116 aa6.72□□□□□ -1.33
PDGFRA-207ENST00000509092 LIMD2Q9BT23 127 aa6.72□□□□□ -1.33
PDGFRA-207ENST00000509092 KLK12Q9UKR0 248 aa6.72□□□□□ -1.33
PDGFRA-207ENST00000509092 ANKRD17O75179 2603 aaKnown RBP6.72□□□□□ -1.33
PDGFRA-207ENST00000509092 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.71□□□□□ -1.33
PDGFRA-207ENST00000509092 ZNF73O43830 326 aaPredicted RBP6.71□□□□□ -1.33
PDGFRA-207ENST00000509092 ELOF1P60002 83 aaKnown RBP6.71□□□□□ -1.33
PDGFRA-207ENST00000509092 CSMD2Q7Z408 3487 aa6.71□□□□□ -1.33
PDGFRA-207ENST00000509092 A0A1B0GUV1 79 aa6.71□□□□□ -1.34
PDGFRA-207ENST00000509092 HCG22E2RYF7 251 aa6.71□□□□□ -1.34
PDGFRA-207ENST00000509092 NDUFB1O75438 58 aa6.71□□□□□ -1.34
PDGFRA-207ENST00000509092 SLURP1P55000 103 aa6.71□□□□□ -1.34
PDGFRA-207ENST00000509092 SPTSSBQ8NFR3 76 aa6.71□□□□□ -1.34
PDGFRA-207ENST00000509092 C11orf45Q8TAV5 145 aa6.71□□□□□ -1.34
PDGFRA-207ENST00000509092 APCP25054 2843 aa6.71□□□□□ -1.34
PDGFRA-207ENST00000509092 IGHV4-61A0A0C4DH41 118 aa6.7□□□□□ -1.34
PDGFRA-207ENST00000509092 PRR4Q16378 134 aa6.7□□□□□ -1.34
PDGFRA-207ENST00000509092 HECTD1Q9ULT8 2610 aa6.7□□□□□ -1.34
PDGFRA-207ENST00000509092 CLPSL2Q6UWE3 100 aa6.7□□□□□ -1.34
PDGFRA-207ENST00000509092 C3orf84H3BNL1 204 aa6.69□□□□□ -1.34
PDGFRA-207ENST00000509092 VPS13CQ709C8 3753 aa6.69□□□□□ -1.34
PDGFRA-207ENST00000509092 Q8N9P0 234 aaPredicted RBP6.69□□□□□ -1.34
PDGFRA-207ENST00000509092 ITPR2Q14571 2701 aa6.69□□□□□ -1.34
PDGFRA-207ENST00000509092 NAV2Q8IVL1 2488 aa6.68□□□□□ -1.34
PDGFRA-207ENST00000509092 C2CD3Q4AC94 2353 aa6.68□□□□□ -1.34
PDGFRA-207ENST00000509092 CR1P17927 2039 aa6.68□□□□□ -1.34
PDGFRA-207ENST00000509092 KHDC1LQ5JSQ8 128 aa6.68□□□□□ -1.34
PDGFRA-207ENST00000509092 UNC79Q9P2D8 2635 aa6.68□□□□□ -1.34
PDGFRA-207ENST00000509092 C7orf65Q6ZTY9 151 aa6.68□□□□□ -1.34
PDGFRA-207ENST00000509092 C16orf74Q96GX8 76 aa6.68□□□□□ -1.34
PDGFRA-207ENST00000509092 B9D2Q9BPU9 175 aa6.68□□□□□ -1.34
PDGFRA-207ENST00000509092 PRR15LQ9BU68 103 aa6.68□□□□□ -1.34
PDGFRA-207ENST00000509092 LCA10Q71F78 164 aa6.67□□□□□ -1.34
PDGFRA-207ENST00000509092 Q75L30 129 aa6.67□□□□□ -1.34
PDGFRA-207ENST00000509092 ODF3L2Q3SX64 289 aa6.67□□□□□ -1.34
PDGFRA-207ENST00000509092 CCL19Q99731 98 aa6.67□□□□□ -1.34
PDGFRA-207ENST00000509092 A0A1B0GW54 56 aa6.66□□□□□ -1.34
PDGFRA-207ENST00000509092 DEFB136Q30KP8 78 aa6.66□□□□□ -1.34
PDGFRA-207ENST00000509092 ST20-AS1Q8NBB2 130 aa6.66□□□□□ -1.34
PDGFRA-207ENST00000509092 WNK1Q9H4A3 2382 aa6.66□□□□□ -1.34
PDGFRA-207ENST00000509092 PRB2P02812 416 aaPredicted RBP6.66□□□□□ -1.34
PDGFRA-207ENST00000509092 CHCHD10Q8WYQ3 142 aaPredicted RBP6.66□□□□□ -1.34
PDGFRA-207ENST00000509092 A0A0J9YWU9 116 aa6.65□□□□□ -1.34
PDGFRA-207ENST00000509092 KRTAP10-9P60411 292 aa6.65□□□□□ -1.34
PDGFRA-207ENST00000509092 UNQ6190/PRO20217Q6UXQ8 127 aa6.65□□□□□ -1.34
PDGFRA-207ENST00000509092 CCDC168Q8NDH2 2452 aa6.65□□□□□ -1.34
PDGFRA-207ENST00000509092 C8orf87E5RJ46 101 aa6.65□□□□□ -1.35
PDGFRA-207ENST00000509092 Q9BRP9 147 aa6.65□□□□□ -1.35
PDGFRA-207ENST00000509092 OXLD1Q5BKU9 147 aa6.64□□□□□ -1.35
PDGFRA-207ENST00000509092 A6NED7 52 aa6.64□□□□□ -1.35
PDGFRA-207ENST00000509092 C18orf65Q6ZTR6 163 aa6.64□□□□□ -1.35
PDGFRA-207ENST00000509092 LINC00528Q8N1L1 170 aa6.64□□□□□ -1.35
PDGFRA-207ENST00000509092 LINC00208Q96KT6 92 aa6.64□□□□□ -1.35
PDGFRA-207ENST00000509092 CREBBPQ92793 2442 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms