RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 ZNF831Q5JPB2 1677 aa1.72□□□□□ -2.13
GYPA-205ENST00000508337 NESP48681 1621 aa1.72□□□□□ -2.13
GYPA-205ENST00000508337 C5P01031 1676 aa1.71□□□□□ -2.14
GYPA-205ENST00000508337 SSC5DA1L4H1 1573 aa1.71□□□□□ -2.14
GYPA-205ENST00000508337 UBR3Q6ZT12 1888 aa1.71□□□□□ -2.14
GYPA-205ENST00000508337 E9PCH4 1651 aa1.71□□□□□ -2.14
GYPA-205ENST00000508337 F5P12259 2224 aa1.7□□□□□ -2.14
GYPA-205ENST00000508337 RPL38P63173 70 aaKnown RBP1.7□□□□□ -2.14
GYPA-205ENST00000508337 NUP188Q5SRE5 1749 aa1.7□□□□□ -2.14
GYPA-205ENST00000508337 DEFB119Q8N690 84 aa1.7□□□□□ -2.14
GYPA-205ENST00000508337 NMES1Q9C002 83 aa1.7□□□□□ -2.14
GYPA-205ENST00000508337 CRIPTQ9P021 101 aa1.7□□□□□ -2.14
GYPA-205ENST00000508337 ALS2Q96Q42 1657 aa1.7□□□□□ -2.14
GYPA-205ENST00000508337 ITSN2Q9NZM3 1697 aa1.7□□□□□ -2.14
GYPA-205ENST00000508337 ASCC3Q8N3C0 2202 aaKnown RBP1.7□□□□□ -2.14
GYPA-205ENST00000508337 VWDEQ8N2E2 1590 aa1.69□□□□□ -2.14
GYPA-205ENST00000508337 SPTY2D1-AS1A0A0U1RR47 76 aa1.69□□□□□ -2.14
GYPA-205ENST00000508337 M0R1W7 72 aa1.69□□□□□ -2.14
GYPA-205ENST00000508337 Q6ZSA8 131 aa1.69□□□□□ -2.14
GYPA-205ENST00000508337 ERCC6L2Q5T890 1561 aa1.68□□□□□ -2.14
GYPA-205ENST00000508337 UGGT1Q9NYU2 1555 aa1.68□□□□□ -2.14
GYPA-205ENST00000508337 ANKRD36A6QL64 1941 aa1.68□□□□□ -2.14
GYPA-205ENST00000508337 SYCP2Q9BX26 1530 aa1.68□□□□□ -2.14
GYPA-205ENST00000508337 CPSF4LA6NMK7 179 aaKnown RBP1.68□□□□□ -2.14
GYPA-205ENST00000508337 ALKQ9UM73 1620 aa1.68□□□□□ -2.14
GYPA-205ENST00000508337 LRRC37A2A6NM11 1700 aa1.68□□□□□ -2.14
GYPA-205ENST00000508337 MROH2AA6NES4 1674 aa1.67□□□□□ -2.14
GYPA-205ENST00000508337 NHSQ6T4R5 1651 aa1.67□□□□□ -2.14
GYPA-205ENST00000508337 SLIT1O75093 1534 aa1.67□□□□□ -2.14
GYPA-205ENST00000508337 TOP2AP11388 1531 aaKnown RBP1.67□□□□□ -2.14
GYPA-205ENST00000508337 PKD1L3Q7Z443 1732 aa1.67□□□□□ -2.14
GYPA-205ENST00000508337 TIAM2Q8IVF5 1701 aa1.67□□□□□ -2.14
GYPA-205ENST00000508337 PLCH1Q4KWH8 1693 aa1.67□□□□□ -2.14
GYPA-205ENST00000508337 KIAA0556O60303 1618 aa1.66□□□□□ -2.14
GYPA-205ENST00000508337 CMC2Q9NRP2 79 aa1.66□□□□□ -2.14
GYPA-205ENST00000508337 WIZO95785 1651 aa1.66□□□□□ -2.14
GYPA-205ENST00000508337 ASXL3Q9C0F0 2248 aa1.66□□□□□ -2.14
GYPA-205ENST00000508337 EFCAB6Q5THR3 1501 aa1.66□□□□□ -2.14
GYPA-205ENST00000508337 ETDCA0A1B0GVM5 59 aa1.65□□□□□ -2.15
GYPA-205ENST00000508337 I3L3M4 83 aa1.65□□□□□ -2.15
GYPA-205ENST00000508337 SERF2P84101 59 aa1.65□□□□□ -2.15
GYPA-205ENST00000508337 KRTAP4-1Q9BYQ7 146 aa1.65□□□□□ -2.15
GYPA-205ENST00000508337 ABRACLQ9P1F3 81 aa1.65□□□□□ -2.15
GYPA-205ENST00000508337 CACNA1BQ00975 2339 aa1.65□□□□□ -2.15
GYPA-205ENST00000508337 TIMM8BQ9Y5J9 83 aaPredicted RBP1.64□□□□□ -2.15
GYPA-205ENST00000508337 ABCC6O95255 1503 aa1.64□□□□□ -2.15
GYPA-205ENST00000508337 PAPPA2Q9BXP8 1791 aa1.64□□□□□ -2.15
GYPA-205ENST00000508337 FCGBPQ9Y6R7 5405 aaPredicted RBP1.63□□□□□ -2.15
GYPA-205ENST00000508337 CADP27708 2225 aa1.63□□□□□ -2.15
GYPA-205ENST00000508337 PLNP26678 52 aa1.63□□□□□ -2.15
GYPA-205ENST00000508337 RICTORQ6R327 1708 aa1.63□□□□□ -2.15
GYPA-205ENST00000508337 ANGP03950 147 aaKnown RBP1.62□□□□□ -2.15
GYPA-205ENST00000508337 CRIP1P50238 77 aa1.62□□□□□ -2.15
GYPA-205ENST00000508337 FXYD6P3P58550 94 aa1.62□□□□□ -2.15
GYPA-205ENST00000508337 KCNQ1DNQ9H478 68 aa1.62□□□□□ -2.15
GYPA-205ENST00000508337 MAST1Q9Y2H9 1570 aa1.62□□□□□ -2.15
GYPA-205ENST00000508337 TECTAO75443 2155 aa1.61□□□□□ -2.15
GYPA-205ENST00000508337 IGIPA6NJ69 53 aa1.61□□□□□ -2.15
GYPA-205ENST00000508337 LYNX1P0DP58 116 aa1.61□□□□□ -2.15
GYPA-205ENST00000508337 TP53AIP1Q9HCN2 124 aa1.61□□□□□ -2.15
GYPA-205ENST00000508337 A0A1B0GUL6 1792 aa1.61□□□□□ -2.15
GYPA-205ENST00000508337 CICQ96RK0 1608 aaPredicted RBP1.61□□□□□ -2.15
GYPA-205ENST00000508337 TSC2P49815 1807 aa1.61□□□□□ -2.15
GYPA-205ENST00000508337 BCORQ6W2J9 1755 aa1.59□□□□□ -2.15
GYPA-205ENST00000508337 ANKRD17O75179 2603 aaKnown RBP1.59□□□□□ -2.15
GYPA-205ENST00000508337 GOLGA4Q13439 2230 aaKnown RBP1.59□□□□□ -2.15
GYPA-205ENST00000508337 SMIM27A0A1W2PRY6 76 aa1.59□□□□□ -2.15
GYPA-205ENST00000508337 SPINK4O60575 86 aa1.59□□□□□ -2.15
GYPA-205ENST00000508337 MRPL33O75394 65 aaKnown RBP1.59□□□□□ -2.15
GYPA-205ENST00000508337 PIGYQ3MUY2 71 aa1.59□□□□□ -2.15
GYPA-205ENST00000508337 FBN3Q75N90 2809 aa1.59□□□□□ -2.16
GYPA-205ENST00000508337 CACNA1CQ13936 2221 aa1.59□□□□□ -2.16
GYPA-205ENST00000508337 EIF2AK4Q9P2K8 1649 aaKnown RBP1.58□□□□□ -2.16
GYPA-205ENST00000508337 CFAP43Q8NDM7 1665 aa1.58□□□□□ -2.16
GYPA-205ENST00000508337 DOT1LQ8TEK3 1739 aa1.58□□□□□ -2.16
GYPA-205ENST00000508337 PARP4Q9UKK3 1724 aaKnown RBP1.58□□□□□ -2.16
GYPA-205ENST00000508337 K7EIL1 84 aa1.58□□□□□ -2.16
GYPA-205ENST00000508337 DEFB114Q30KQ6 69 aa1.58□□□□□ -2.16
GYPA-205ENST00000508337 USMG5Q96IX5 58 aa1.58□□□□□ -2.16
GYPA-205ENST00000508337 ZFHX3Q15911 3703 aa1.57□□□□□ -2.16
GYPA-205ENST00000508337 NRAPQ86VF7 1730 aa1.57□□□□□ -2.16
GYPA-205ENST00000508337 TULP4Q9NRJ4 1543 aa1.57□□□□□ -2.16
GYPA-205ENST00000508337 DEFB131BA0A096LNP1 70 aa1.57□□□□□ -2.16
GYPA-205ENST00000508337 CDKN2A-AS1Q9UH64 79 aa1.57□□□□□ -2.16
GYPA-205ENST00000508337 ZDBF2Q9HCK1 2354 aa1.57□□□□□ -2.16
GYPA-205ENST00000508337 A0A0G2JMZ2 1700 aa1.57□□□□□ -2.16
GYPA-205ENST00000508337 COL14A1Q05707 1796 aaKnown RBP1.57□□□□□ -2.16
GYPA-205ENST00000508337 I3L2K1 104 aa1.56□□□□□ -2.16
GYPA-205ENST00000508337 ABCA5Q8WWZ7 1642 aa1.55□□□□□ -2.16
GYPA-205ENST00000508337 KMT2BQ9UMN6 2715 aaPredicted RBP1.55□□□□□ -2.16
GYPA-205ENST00000508337 TNCP24821 2201 aa1.55□□□□□ -2.16
GYPA-205ENST00000508337 KNTC1P50748 2209 aa1.55□□□□□ -2.16
GYPA-205ENST00000508337 PLXNB2O15031 1838 aa1.55□□□□□ -2.16
GYPA-205ENST00000508337 H0YGX0 51 aa1.55□□□□□ -2.16
GYPA-205ENST00000508337 K7EQZ3 153 aa1.55□□□□□ -2.16
GYPA-205ENST00000508337 NDUFA3O95167 84 aa1.55□□□□□ -2.16
GYPA-205ENST00000508337 COX6B1P14854 86 aa1.55□□□□□ -2.16
GYPA-205ENST00000508337 MRPL34Q9BQ48 92 aaKnown RBP1.55□□□□□ -2.16
GYPA-205ENST00000508337 FLG2Q5D862 2391 aaPredicted RBP1.55□□□□□ -2.16
GYPA-205ENST00000508337 BIVM-ERCC5R4GMW8 1640 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms