RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 HIST1H2BOP23527 126 aa8.5□□□□□ -1.05
RAB28-205ENST00000508274 HIST1H2BBP33778 126 aa8.5□□□□□ -1.05
RAB28-205ENST00000508274 HIST1H2BDP58876 126 aa8.5□□□□□ -1.05
RAB28-205ENST00000508274 HIST1H2BCP62807 126 aa8.5□□□□□ -1.05
RAB28-205ENST00000508274 HIST2H2BEQ16778 126 aa8.5□□□□□ -1.05
RAB28-205ENST00000508274 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.5□□□□□ -1.05
RAB28-205ENST00000508274 HIST1H2BHQ93079 126 aa8.5□□□□□ -1.05
RAB28-205ENST00000508274 HIST1H2BNQ99877 126 aa8.5□□□□□ -1.05
RAB28-205ENST00000508274 HIST1H2BMQ99879 126 aa8.5□□□□□ -1.05
RAB28-205ENST00000508274 BAGE3Q86Y29 109 aa8.49□□□□□ -1.05
RAB28-205ENST00000508274 NKAPP1Q8N9T2 125 aa8.49□□□□□ -1.05
RAB28-205ENST00000508274 ZNF625Q96I27 306 aaPredicted RBP8.49□□□□□ -1.05
RAB28-205ENST00000508274 EIF4EBP3O60516 100 aaPredicted RBP8.48□□□□□ -1.05
RAB28-205ENST00000508274 RPL13AP40429 203 aaKnown RBP8.48□□□□□ -1.05
RAB28-205ENST00000508274 RPL28P46779 137 aaKnown RBP8.48□□□□□ -1.05
RAB28-205ENST00000508274 AKR1D1P51857 326 aa8.48□□□□□ -1.05
RAB28-205ENST00000508274 ERG28Q9UKR5 140 aa8.48□□□□□ -1.05
RAB28-205ENST00000508274 IGKV2-28A0A075B6P5 120 aa8.47□□□□□ -1.05
RAB28-205ENST00000508274 A0A087X002 238 aa8.47□□□□□ -1.05
RAB28-205ENST00000508274 IGKV2D-28P01615 120 aa8.47□□□□□ -1.05
RAB28-205ENST00000508274 TMEM170BQ5T4T1 132 aa8.47□□□□□ -1.05
RAB28-205ENST00000508274 SND1-IT1Q9HBX3 110 aa8.47□□□□□ -1.05
RAB28-205ENST00000508274 VPREB1P12018 145 aa8.46□□□□□ -1.06
RAB28-205ENST00000508274 Q8NDZ9 215 aa8.46□□□□□ -1.06
RAB28-205ENST00000508274 SMIM6P0DI80 62 aa8.45□□□□□ -1.06
RAB28-205ENST00000508274 KRTAP13-1Q8IUC0 172 aa8.45□□□□□ -1.06
RAB28-205ENST00000508274 CHTOPQ9Y3Y2 248 aaKnown RBP8.45□□□□□ -1.06
RAB28-205ENST00000508274 UBE2AP49459 152 aa8.44□□□□□ -1.06
RAB28-205ENST00000508274 COA6Q5JTJ3 125 aaKnown RBP8.44□□□□□ -1.06
RAB28-205ENST00000508274 ANAPC11Q9NYG5 84 aa8.44□□□□□ -1.06
RAB28-205ENST00000508274 C12orf57Q99622 126 aa8.44□□□□□ -1.06
RAB28-205ENST00000508274 COX17Q14061 63 aa8.43□□□□□ -1.06
RAB28-205ENST00000508274 HIST3H2BBQ8N257 126 aa8.43□□□□□ -1.06
RAB28-205ENST00000508274 IFI27L1Q96BM0 104 aa8.43□□□□□ -1.06
RAB28-205ENST00000508274 TMEM238C9JI98 176 aa8.42□□□□□ -1.06
RAB28-205ENST00000508274 CHCHD1Q96BP2 118 aaKnown RBP8.42□□□□□ -1.06
RAB28-205ENST00000508274 TMEM223A0PJW6 202 aa8.41□□□□□ -1.06
RAB28-205ENST00000508274 TSPAN13O95857 204 aa8.41□□□□□ -1.06
RAB28-205ENST00000508274 PRLHP81277 87 aa8.41□□□□□ -1.06
RAB28-205ENST00000508274 PRR4Q16378 134 aa8.41□□□□□ -1.06
RAB28-205ENST00000508274 TRAV12-1A0A0B4J245 112 aa8.4□□□□□ -1.06
RAB28-205ENST00000508274 CRYGAP11844 174 aa8.4□□□□□ -1.06
RAB28-205ENST00000508274 TMEM126AQ9H061 195 aa8.4□□□□□ -1.06
RAB28-205ENST00000508274 A0A0U1RRA0 63 aa8.39□□□□□ -1.07
RAB28-205ENST00000508274 RPL24P83731 157 aaKnown RBP8.39□□□□□ -1.07
RAB28-205ENST00000508274 KRTAP13-2Q52LG2 175 aa8.39□□□□□ -1.07
RAB28-205ENST00000508274 SFTA2Q6UW10 78 aa8.39□□□□□ -1.07
RAB28-205ENST00000508274 FAM19A1Q7Z5A9 133 aa8.39□□□□□ -1.07
RAB28-205ENST00000508274 FAM19A2Q8N3H0 131 aa8.39□□□□□ -1.07
RAB28-205ENST00000508274 TYMSOSQ8TAI1 123 aa8.39□□□□□ -1.07
RAB28-205ENST00000508274 M0R378 163 aa8.39□□□□□ -1.07
RAB28-205ENST00000508274 S100A2P29034 98 aa8.39□□□□□ -1.07
RAB28-205ENST00000508274 LINC00158P58513 81 aa8.39□□□□□ -1.07
RAB28-205ENST00000508274 HSBP1O75506 76 aa8.37□□□□□ -1.07
RAB28-205ENST00000508274 H0Y8G0 127 aa8.36□□□□□ -1.07
RAB28-205ENST00000508274 HIST1H2BLQ99880 126 aa8.36□□□□□ -1.07
RAB28-205ENST00000508274 SMIM13P0DJ93 91 aa8.35□□□□□ -1.07
RAB28-205ENST00000508274 LINC00310P59036 64 aa8.35□□□□□ -1.07
RAB28-205ENST00000508274 S100A12P80511 92 aa8.35□□□□□ -1.07
RAB28-205ENST00000508274 PYY3Q5JQD4 70 aa8.35□□□□□ -1.07
RAB28-205ENST00000508274 FABP4P15090 132 aa8.35□□□□□ -1.07
RAB28-205ENST00000508274 FAM229BQ4G0N7 80 aa8.34□□□□□ -1.07
RAB28-205ENST00000508274 XP32Q5T750 250 aa8.34□□□□□ -1.07
RAB28-205ENST00000508274 TMEM238LA0A1B0GVL6 79 aa8.33□□□□□ -1.08
RAB28-205ENST00000508274 SERF1AO75920 110 aa8.33□□□□□ -1.08
RAB28-205ENST00000508274 MEIG1Q5JSS6 88 aa8.33□□□□□ -1.08
RAB28-205ENST00000508274 NCR3O14931 201 aa8.32□□□□□ -1.08
RAB28-205ENST00000508274 MIR7-3HGQ8N6C7 128 aa8.32□□□□□ -1.08
RAB28-205ENST00000508274 TSPEAR-AS2P59090 65 aa8.31□□□□□ -1.08
RAB28-205ENST00000508274 BOD1L2Q8IYS8 172 aa8.31□□□□□ -1.08
RAB28-205ENST00000508274 PLEKHB2Q96CS7 222 aa8.31□□□□□ -1.08
RAB28-205ENST00000508274 HIGD2AQ9BW72 106 aa8.31□□□□□ -1.08
RAB28-205ENST00000508274 NDUFA12Q9UI09 145 aa8.31□□□□□ -1.08
RAB28-205ENST00000508274 PCP4L1A6NKN8 68 aa8.31□□□□□ -1.08
RAB28-205ENST00000508274 LEPROTL1O95214 131 aa8.31□□□□□ -1.08
RAB28-205ENST00000508274 IGKV2D-26A0A0A0MRZ7 120 aa8.3□□□□□ -1.08
RAB28-205ENST00000508274 HERV-K104P63124 156 aa8.3□□□□□ -1.08
RAB28-205ENST00000508274 JOSD1Q15040 202 aaPredicted RBP8.3□□□□□ -1.08
RAB28-205ENST00000508274 LINC00304Q8N9R0 145 aa8.3□□□□□ -1.08
RAB28-205ENST00000508274 RETNLBQ9BQ08 111 aa8.3□□□□□ -1.08
RAB28-205ENST00000508274 C3orf22Q8N5N4 141 aa8.29□□□□□ -1.08
RAB28-205ENST00000508274 PMCHL2Q9BQD1 86 aa8.28□□□□□ -1.08
RAB28-205ENST00000508274 MYMXA0A1B0GTQ4 84 aa8.27□□□□□ -1.09
RAB28-205ENST00000508274 DAND5Q8N907 189 aa8.27□□□□□ -1.09
RAB28-205ENST00000508274 PRYO14603 147 aa8.27□□□□□ -1.09
RAB28-205ENST00000508274 LEPROTO15243 131 aa8.27□□□□□ -1.09
RAB28-205ENST00000508274 MUC2Q02817 5179 aa8.26□□□□□ -1.09
RAB28-205ENST00000508274 PLNP26678 52 aa8.26□□□□□ -1.09
RAB28-205ENST00000508274 SPRR4Q96PI1 79 aa8.26□□□□□ -1.09
RAB28-205ENST00000508274 TRBV10-3A0A0K0K1G6 114 aa8.25□□□□□ -1.09
RAB28-205ENST00000508274 LINC00587B1AMM8 73 aa8.25□□□□□ -1.09
RAB28-205ENST00000508274 SPRR1AP35321 89 aa8.25□□□□□ -1.09
RAB28-205ENST00000508274 KCNQ1DNQ9H478 68 aa8.25□□□□□ -1.09
RAB28-205ENST00000508274 HSPB8Q9UJY1 196 aa8.25□□□□□ -1.09
RAB28-205ENST00000508274 KRTAP4-16G5E9R7 235 aaPredicted RBP8.24□□□□□ -1.09
RAB28-205ENST00000508274 DPM2O94777 84 aa8.24□□□□□ -1.09
RAB28-205ENST00000508274 MAP1LC3CQ9BXW4 147 aa8.24□□□□□ -1.09
RAB28-205ENST00000508274 J3QQQ9 107 aa8.23□□□□□ -1.09
RAB28-205ENST00000508274 LINC00337Q8N6G1 96 aa8.23□□□□□ -1.09
RAB28-205ENST00000508274 IGKCP01834 107 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms