RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 Q8IZM0 81 aa7.1□□□□□ -1.27
PDLIM5-210ENST00000508216 XAGE1AQ9HD64 81 aa7.1□□□□□ -1.27
PDLIM5-210ENST00000508216 FRYLO94915 3013 aa7.09□□□□□ -1.27
PDLIM5-210ENST00000508216 IGHV4-61A0A0C4DH41 118 aa7.09□□□□□ -1.27
PDLIM5-210ENST00000508216 SPINK14Q6IE38 97 aa7.09□□□□□ -1.27
PDLIM5-210ENST00000508216 IGLV6-57P01721 117 aa7.08□□□□□ -1.28
PDLIM5-210ENST00000508216 ROMO1P60602 79 aa7.08□□□□□ -1.28
PDLIM5-210ENST00000508216 LYPD2Q6UXB3 125 aa7.08□□□□□ -1.28
PDLIM5-210ENST00000508216 PRB1P04280 392 aa7.08□□□□□ -1.28
PDLIM5-210ENST00000508216 MAP6D1Q9H9H5 199 aa7.08□□□□□ -1.28
PDLIM5-210ENST00000508216 NAV2Q8IVL1 2488 aa7.07□□□□□ -1.28
PDLIM5-210ENST00000508216 H0Y9P7 68 aa7.07□□□□□ -1.28
PDLIM5-210ENST00000508216 FAM215AQ9Y5M1 114 aa7.07□□□□□ -1.28
PDLIM5-210ENST00000508216 IGHV4-28A0A0C4DH34 117 aa7.06□□□□□ -1.28
PDLIM5-210ENST00000508216 PROK1P58294 105 aa7.06□□□□□ -1.28
PDLIM5-210ENST00000508216 KPRPQ5T749 579 aaPredicted RBP7.06□□□□□ -1.28
PDLIM5-210ENST00000508216 C1orf134Q5TEV5 83 aa7.06□□□□□ -1.28
PDLIM5-210ENST00000508216 OTOGLQ3ZCN5 2332 aa7.05□□□□□ -1.28
PDLIM5-210ENST00000508216 Q6ZSN1 163 aa7.05□□□□□ -1.28
PDLIM5-210ENST00000508216 TOMM7Q9P0U1 55 aa7.05□□□□□ -1.28
PDLIM5-210ENST00000508216 SORL1Q92673 2214 aa7.05□□□□□ -1.28
PDLIM5-210ENST00000508216 LINC01565O15544 149 aa7.05□□□□□ -1.28
PDLIM5-210ENST00000508216 DEFB1P60022 68 aa7.05□□□□□ -1.28
PDLIM5-210ENST00000508216 CHCHD10Q8WYQ3 142 aaPredicted RBP7.05□□□□□ -1.28
PDLIM5-210ENST00000508216 ZZEF1O43149 2961 aa7.04□□□□□ -1.28
PDLIM5-210ENST00000508216 FRYQ5TBA9 3013 aa7.04□□□□□ -1.28
PDLIM5-210ENST00000508216 TRGV4A0A0C4DH28 118 aa7.04□□□□□ -1.28
PDLIM5-210ENST00000508216 IGLV5-48A0A075B6I7 105 aa7.03□□□□□ -1.28
PDLIM5-210ENST00000508216 A8MTW9 85 aa7.03□□□□□ -1.28
PDLIM5-210ENST00000508216 LINC00959A0A1B0GUT2 108 aa7.03□□□□□ -1.28
PDLIM5-210ENST00000508216 KNL1Q8NG31 2342 aa7.02□□□□□ -1.29
PDLIM5-210ENST00000508216 IGHV3-11P01762 117 aa7.02□□□□□ -1.29
PDLIM5-210ENST00000508216 COX7A1P24310 79 aa7.02□□□□□ -1.29
PDLIM5-210ENST00000508216 DSCR10P59022 87 aa7.02□□□□□ -1.29
PDLIM5-210ENST00000508216 KLK12Q9UKR0 248 aa7.02□□□□□ -1.29
PDLIM5-210ENST00000508216 CSAG1Q6PB30 78 aa7.01□□□□□ -1.29
PDLIM5-210ENST00000508216 SPATA8Q6RVD6 105 aa7.01□□□□□ -1.29
PDLIM5-210ENST00000508216 KRTAP4-12Q9BQ66 201 aa7.01□□□□□ -1.29
PDLIM5-210ENST00000508216 MINOS1-NBL1R4GNA1 71 aa7.01□□□□□ -1.29
PDLIM5-210ENST00000508216 CR1P17927 2039 aa7.01□□□□□ -1.29
PDLIM5-210ENST00000508216 IGKV2D-24A0A075B6R9 120 aa7□□□□□ -1.29
PDLIM5-210ENST00000508216 C11orf71Q6IPW1 123 aa7□□□□□ -1.29
PDLIM5-210ENST00000508216 SPAG11AQ6PDA7 123 aa7□□□□□ -1.29
PDLIM5-210ENST00000508216 Q6ZR54 194 aa7□□□□□ -1.29
PDLIM5-210ENST00000508216 KRTAP19-1Q8IUB9 90 aa7□□□□□ -1.29
PDLIM5-210ENST00000508216 KRTAP9-2Q9BYQ4 174 aa7□□□□□ -1.29
PDLIM5-210ENST00000508216 LY6G6EA0A0G2JKS1 128 aa7□□□□□ -1.29
PDLIM5-210ENST00000508216 CNEP1R1Q8N9A8 125 aa7□□□□□ -1.29
PDLIM5-210ENST00000508216 H3BUA1 57 aa6.98□□□□□ -1.29
PDLIM5-210ENST00000508216 DEFB112Q30KQ8 113 aa6.98□□□□□ -1.29
PDLIM5-210ENST00000508216 SPRR4Q96PI1 79 aa6.98□□□□□ -1.29
PDLIM5-210ENST00000508216 RHPN1-AS1Q9BWJ2 59 aa6.98□□□□□ -1.29
PDLIM5-210ENST00000508216 ABCA4P78363 2273 aa6.98□□□□□ -1.29
PDLIM5-210ENST00000508216 WNK2Q9Y3S1 2297 aa6.98□□□□□ -1.29
PDLIM5-210ENST00000508216 NBEAQ8NFP9 2946 aa6.98□□□□□ -1.29
PDLIM5-210ENST00000508216 KRTAP19-4Q3LI73 84 aa6.97□□□□□ -1.29
PDLIM5-210ENST00000508216 HELZ2Q9BYK8 2649 aaKnown RBP6.97□□□□□ -1.29
PDLIM5-210ENST00000508216 U3KQA8 63 aa6.97□□□□□ -1.29
PDLIM5-210ENST00000508216 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.96□□□□□ -1.3
PDLIM5-210ENST00000508216 PRB2P02812 416 aaPredicted RBP6.95□□□□□ -1.3
PDLIM5-210ENST00000508216 USMG5Q96IX5 58 aa6.95□□□□□ -1.3
PDLIM5-210ENST00000508216 MGAQ8IWI9 3026 aa6.95□□□□□ -1.3
PDLIM5-210ENST00000508216 SMG1Q96Q15 3661 aaKnown RBP6.95□□□□□ -1.3
PDLIM5-210ENST00000508216 KRTAP9-6A0A140TA67 174 aa6.95□□□□□ -1.3
PDLIM5-210ENST00000508216 KRTAP29-1A8MX34 341 aaPredicted RBP6.95□□□□□ -1.3
PDLIM5-210ENST00000508216 GYPEP15421 78 aa6.95□□□□□ -1.3
PDLIM5-210ENST00000508216 MED13LQ71F56 2210 aa6.94□□□□□ -1.3
PDLIM5-210ENST00000508216 CEP295Q9C0D2 2601 aa6.94□□□□□ -1.3
PDLIM5-210ENST00000508216 K7EQZ3 153 aa6.94□□□□□ -1.3
PDLIM5-210ENST00000508216 SPINK13Q1W4C9 94 aa6.94□□□□□ -1.3
PDLIM5-210ENST00000508216 LOC400499M0QZD8 3231 aa6.94□□□□□ -1.3
PDLIM5-210ENST00000508216 ATP1A1-AS1Q5TC04 95 aa6.93□□□□□ -1.3
PDLIM5-210ENST00000508216 DOPEY2Q9Y3R5 2298 aa6.93□□□□□ -1.3
PDLIM5-210ENST00000508216 Q8NBF4 154 aa6.92□□□□□ -1.3
PDLIM5-210ENST00000508216 IGF2RP11717 2491 aa6.92□□□□□ -1.3
PDLIM5-210ENST00000508216 IGLV1-50A0A075B6I6 118 aa6.92□□□□□ -1.3
PDLIM5-210ENST00000508216 IGLV5-37A0A075B6J1 123 aa6.92□□□□□ -1.3
PDLIM5-210ENST00000508216 Q8NDZ9 215 aa6.92□□□□□ -1.3
PDLIM5-210ENST00000508216 ITPR1Q14643 2758 aa6.91□□□□□ -1.3
PDLIM5-210ENST00000508216 USP9XQ93008 2570 aaPredicted RBP6.9□□□□□ -1.3
PDLIM5-210ENST00000508216 DSPP15924 2871 aaKnown RBP6.9□□□□□ -1.3
PDLIM5-210ENST00000508216 DEFB131BA0A096LNP1 70 aa6.9□□□□□ -1.3
PDLIM5-210ENST00000508216 SLURP1P55000 103 aa6.9□□□□□ -1.3
PDLIM5-210ENST00000508216 REG3GQ6UW15 175 aa6.9□□□□□ -1.3
PDLIM5-210ENST00000508216 WDFY3Q8IZQ1 3526 aa6.9□□□□□ -1.31
PDLIM5-210ENST00000508216 G3V318 75 aa6.89□□□□□ -1.31
PDLIM5-210ENST00000508216 IGSF10Q6WRI0 2623 aa6.89□□□□□ -1.31
PDLIM5-210ENST00000508216 TENM4Q6N022 2769 aa6.88□□□□□ -1.31
PDLIM5-210ENST00000508216 MIR22HGQ0VDD5 57 aa6.88□□□□□ -1.31
PDLIM5-210ENST00000508216 A0A0J9YWU9 116 aa6.87□□□□□ -1.31
PDLIM5-210ENST00000508216 ICE1Q9Y2F5 2266 aa6.86□□□□□ -1.31
PDLIM5-210ENST00000508216 A0A087WSZ3 146 aa6.85□□□□□ -1.31
PDLIM5-210ENST00000508216 GVQW2A0A096LPI5 108 aaPredicted RBP6.85□□□□□ -1.31
PDLIM5-210ENST00000508216 DMXL2Q8TDJ6 3036 aa6.85□□□□□ -1.31
PDLIM5-210ENST00000508216 DNAJC9-AS1A6NH13 148 aa6.85□□□□□ -1.31
PDLIM5-210ENST00000508216 REG3AQ06141 175 aa6.85□□□□□ -1.31
PDLIM5-210ENST00000508216 KRTAP25-1Q3LHN0 102 aa6.85□□□□□ -1.31
PDLIM5-210ENST00000508216 C5orf56Q8N8D9 126 aa6.85□□□□□ -1.31
PDLIM5-210ENST00000508216 PRR34Q9NV39 138 aa6.85□□□□□ -1.31
PDLIM5-210ENST00000508216 SPTBN1Q01082 2364 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms