RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 GIG44P09565 113 aaPredicted RBP12.21□□□□□ -0.45
POLR2J3-209ENST00000504157 C2CD3Q4AC94 2353 aa12.21□□□□□ -0.46
POLR2J3-209ENST00000504157 MUC7Q8TAX7 377 aa12.21□□□□□ -0.46
POLR2J3-209ENST00000504157 PRYO14603 147 aa12.2□□□□□ -0.46
POLR2J3-209ENST00000504157 PRR15Q8IV56 129 aa12.2□□□□□ -0.46
POLR2J3-209ENST00000504157 CSPG4Q6UVK1 2322 aa12.2□□□□□ -0.46
POLR2J3-209ENST00000504157 Q6ZTC4 211 aa12.19□□□□□ -0.46
POLR2J3-209ENST00000504157 A0A1B0GUV1 79 aa12.19□□□□□ -0.46
POLR2J3-209ENST00000504157 FUSP35637 526 aaKnown RBP eCLIP12.19□□□□□ -0.46
POLR2J3-209ENST00000504157 DEFB113Q30KQ7 82 aa12.19□□□□□ -0.46
POLR2J3-209ENST00000504157 KHDC1LQ5JSQ8 128 aa12.19□□□□□ -0.46
POLR2J3-209ENST00000504157 CMC4P56277 68 aaPredicted RBP12.18□□□□□ -0.46
POLR2J3-209ENST00000504157 SPATA3Q8NHX4 192 aa12.18□□□□□ -0.46
POLR2J3-209ENST00000504157 SCXQ7RTU7 201 aa12.18□□□□□ -0.46
POLR2J3-209ENST00000504157 IGHV4-28A0A0C4DH34 117 aa12.16□□□□□ -0.46
POLR2J3-209ENST00000504157 PDZD2O15018 2839 aa12.16□□□□□ -0.46
POLR2J3-209ENST00000504157 PMAIP1Q13794 54 aa12.15□□□□□ -0.46
POLR2J3-209ENST00000504157 KIAA0087Q14695 138 aa12.15□□□□□ -0.46
POLR2J3-209ENST00000504157 Q6ZRU5 148 aa12.15□□□□□ -0.46
POLR2J3-209ENST00000504157 OCR1Q9BZK8 76 aa12.15□□□□□ -0.46
POLR2J3-209ENST00000504157 Q8NDZ9 215 aa12.14□□□□□ -0.47
POLR2J3-209ENST00000504157 CCDC168Q8NDH2 2452 aa12.14□□□□□ -0.47
POLR2J3-209ENST00000504157 IGHV4-31P0DP07 118 aa12.14□□□□□ -0.47
POLR2J3-209ENST00000504157 Q6ZQY7 126 aa12.14□□□□□ -0.47
POLR2J3-209ENST00000504157 CSNK1G2-AS1Q8NCQ2 148 aa12.13□□□□□ -0.47
POLR2J3-209ENST00000504157 FLNBO75369 2602 aaKnown RBP12.12□□□□□ -0.47
POLR2J3-209ENST00000504157 BAHCC1Q9P281 2608 aa12.12□□□□□ -0.47
POLR2J3-209ENST00000504157 NOTCH2Q04721 2471 aa12.12□□□□□ -0.47
POLR2J3-209ENST00000504157 CD164L2Q6UWJ8 174 aa12.09□□□□□ -0.47
POLR2J3-209ENST00000504157 KRTAP1-3Q8IUG1 177 aa12.09□□□□□ -0.47
POLR2J3-209ENST00000504157 MAPK1IP1LQ8NDC0 245 aa12.09□□□□□ -0.47
POLR2J3-209ENST00000504157 IGKV4-1P06312 121 aa12.08□□□□□ -0.48
POLR2J3-209ENST00000504157 Q1T7F1 81 aa12.08□□□□□ -0.48
POLR2J3-209ENST00000504157 hDV103S1A0JD37 113 aa12.07□□□□□ -0.48
POLR2J3-209ENST00000504157 IGLV6-57P01721 117 aa12.07□□□□□ -0.48
POLR2J3-209ENST00000504157 CCL24O00175 119 aa12.07□□□□□ -0.48
POLR2J3-209ENST00000504157 LINC00612Q8N6U2 182 aa12.07□□□□□ -0.48
POLR2J3-209ENST00000504157 ZNF469Q96JG9 3925 aaPredicted RBP12.06□□□□□ -0.48
POLR2J3-209ENST00000504157 C19orf73Q9NVV2 129 aa12.06□□□□□ -0.48
POLR2J3-209ENST00000504157 C9orf116Q5BN46 136 aaPredicted RBP12.05□□□□□ -0.48
POLR2J3-209ENST00000504157 HIGD2AQ9BW72 106 aa12.05□□□□□ -0.48
POLR2J3-209ENST00000504157 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.05□□□□□ -0.48
POLR2J3-209ENST00000504157 GYPEP15421 78 aa12.04□□□□□ -0.48
POLR2J3-209ENST00000504157 ZANQ9Y493 2812 aa12.04□□□□□ -0.48
POLR2J3-209ENST00000504157 AKAP9Q99996 3911 aa12.04□□□□□ -0.48
POLR2J3-209ENST00000504157 ITPR3Q14573 2671 aa12.03□□□□□ -0.48
POLR2J3-209ENST00000504157 COX7BP24311 80 aa12.03□□□□□ -0.48
POLR2J3-209ENST00000504157 Q8N9L7 120 aa12.03□□□□□ -0.48
POLR2J3-209ENST00000504157 Q6ZRP5 223 aa12.02□□□□□ -0.48
POLR2J3-209ENST00000504157 MYO9AB2RTY4 2548 aa12.02□□□□□ -0.49
POLR2J3-209ENST00000504157 CLPSL2Q6UWE3 100 aa12.02□□□□□ -0.49
POLR2J3-209ENST00000504157 CHCHD10Q8WYQ3 142 aaPredicted RBP12.01□□□□□ -0.49
POLR2J3-209ENST00000504157 LINC00269Q8N2A0 174 aa12.01□□□□□ -0.49
POLR2J3-209ENST00000504157 LINC01006Q8NI28 216 aa12.01□□□□□ -0.49
POLR2J3-209ENST00000504157 WFDC10AQ9H1F0 79 aa12.01□□□□□ -0.49
POLR2J3-209ENST00000504157 CR1P17927 2039 aa12□□□□□ -0.49
POLR2J3-209ENST00000504157 SETXQ7Z333 2677 aaKnown RBP11.99□□□□□ -0.49
POLR2J3-209ENST00000504157 NOTCH3Q9UM47 2321 aa11.99□□□□□ -0.49
POLR2J3-209ENST00000504157 FLNAP21333 2647 aaKnown RBP11.98□□□□□ -0.49
POLR2J3-209ENST00000504157 A0A0J9YWU9 116 aa11.98□□□□□ -0.49
POLR2J3-209ENST00000504157 IGLV1-51P01701 117 aa11.98□□□□□ -0.49
POLR2J3-209ENST00000504157 IGHV4-30-4P0DP06 118 aa11.98□□□□□ -0.49
POLR2J3-209ENST00000504157 MXRA5Q9NR99 2828 aa11.98□□□□□ -0.49
POLR2J3-209ENST00000504157 LCE6AA0A183 80 aa11.98□□□□□ -0.49
POLR2J3-209ENST00000504157 DIRC1Q969H9 104 aa11.98□□□□□ -0.49
POLR2J3-209ENST00000504157 PRO0255Q9UI72 69 aa11.98□□□□□ -0.49
POLR2J3-209ENST00000504157 TEX15Q9BXT5 2789 aa11.97□□□□□ -0.49
POLR2J3-209ENST00000504157 OTOGQ6ZRI0 2925 aa11.97□□□□□ -0.49
POLR2J3-209ENST00000504157 DEFB130BP0DP73 79 aa11.96□□□□□ -0.49
POLR2J3-209ENST00000504157 DEFB130AP0DP74 79 aa11.96□□□□□ -0.49
POLR2J3-209ENST00000504157 C1orf64Q8NEQ6 169 aa11.96□□□□□ -0.49
POLR2J3-209ENST00000504157 DAD1P61803 113 aa11.96□□□□□ -0.49
POLR2J3-209ENST00000504157 ACANP16112 2415 aa11.95□□□□□ -0.5
POLR2J3-209ENST00000504157 CD164Q04900 197 aa11.95□□□□□ -0.5
POLR2J3-209ENST00000504157 REG3AQ06141 175 aa11.95□□□□□ -0.5
POLR2J3-209ENST00000504157 WNK1Q9H4A3 2382 aa11.94□□□□□ -0.5
POLR2J3-209ENST00000504157 CELA1Q9UNI1 258 aa11.93□□□□□ -0.5
POLR2J3-209ENST00000504157 TLN2Q9Y4G6 2542 aa11.93□□□□□ -0.5
POLR2J3-209ENST00000504157 GVQW2A0A096LPI5 108 aaPredicted RBP11.92□□□□□ -0.5
POLR2J3-209ENST00000504157 ELOF1P60002 83 aaKnown RBP11.92□□□□□ -0.5
POLR2J3-209ENST00000504157 LRCOL1A6NCL2 159 aa11.92□□□□□ -0.5
POLR2J3-209ENST00000504157 C10orf25Q5T742 122 aa11.92□□□□□ -0.5
POLR2J3-209ENST00000504157 CYSRT1A8MQ03 144 aa11.91□□□□□ -0.5
POLR2J3-209ENST00000504157 SPAG11BQ08648 103 aa11.91□□□□□ -0.5
POLR2J3-209ENST00000504157 UNQ6190/PRO20217Q6UXQ8 127 aa11.91□□□□□ -0.5
POLR2J3-209ENST00000504157 ZNF73O43830 326 aaPredicted RBP11.91□□□□□ -0.5
POLR2J3-209ENST00000504157 IGLV10-54A0A075B6I4 117 aa11.9□□□□□ -0.5
POLR2J3-209ENST00000504157 TRAV22A0A0B4J277 110 aa11.9□□□□□ -0.5
POLR2J3-209ENST00000504157 ANGP03950 147 aaKnown RBP11.9□□□□□ -0.5
POLR2J3-209ENST00000504157 ESM1Q9NQ30 184 aa11.9□□□□□ -0.5
POLR2J3-209ENST00000504157 ZCCHC13Q8WW36 166 aaKnown RBP11.9□□□□□ -0.51
POLR2J3-209ENST00000504157 DNAJC9-AS1A6NH13 148 aa11.88□□□□□ -0.51
POLR2J3-209ENST00000504157 PSPHP1O15172 72 aa11.88□□□□□ -0.51
POLR2J3-209ENST00000504157 FAM30AQ9NZY2 134 aa11.88□□□□□ -0.51
POLR2J3-209ENST00000504157 SMR3AQ99954 134 aa11.87□□□□□ -0.51
POLR2J3-209ENST00000504157 A0A096LPF7 62 aa11.87□□□□□ -0.51
POLR2J3-209ENST00000504157 HIGD2BQ4VC39 106 aa11.87□□□□□ -0.51
POLR2J3-209ENST00000504157 SMIM29Q86T20 159 aa11.87□□□□□ -0.51
POLR2J3-209ENST00000504157 KRTAP1-1Q07627 177 aa11.86□□□□□ -0.51
POLR2J3-209ENST00000504157 CYP4F30PQ9H0H9 118 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms