RNA–Protein interactions for RNA: ENST00000496076.1

CLTC-208, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-208ENST00000496076 UBE2D4Q9Y2X8 147 aa0.09□□□□□ -2.4
CLTC-208ENST00000496076 TTC37Q6PGP7 1564 aa0.09□□□□□ -2.4
CLTC-208ENST00000496076 TENM4Q6N022 2769 aa0.09□□□□□ -2.4
CLTC-208ENST00000496076 COL7A1Q02388 2944 aa0.09□□□□□ -2.4
CLTC-208ENST00000496076 PTPN13Q12923 2485 aa0.08□□□□□ -2.4
CLTC-208ENST00000496076 LRRC37AA6NMS7 1700 aa0.08□□□□□ -2.4
CLTC-208ENST00000496076 CRYBG1Q9Y4K1 1723 aa0.08□□□□□ -2.4
CLTC-208ENST00000496076 SPTY2D1-AS1A0A0U1RR47 76 aa0.08□□□□□ -2.4
CLTC-208ENST00000496076 CACNA1AO00555 2505 aa0.08□□□□□ -2.4
CLTC-208ENST00000496076 CEP162Q5TB80 1403 aa0.07□□□□□ -2.4
CLTC-208ENST00000496076 MYO3AQ8NEV4 1616 aa0.07□□□□□ -2.4
CLTC-208ENST00000496076 K7EP34 96 aa0.07□□□□□ -2.4
CLTC-208ENST00000496076 PYY3Q5JQD4 70 aa0.07□□□□□ -2.4
CLTC-208ENST00000496076 MYH4Q9Y623 1939 aa0.07□□□□□ -2.4
CLTC-208ENST00000496076 H1FX-AS1Q4G0G2 97 aa0.06□□□□□ -2.4
CLTC-208ENST00000496076 NMSQ5H8A3 153 aa0.06□□□□□ -2.4
CLTC-208ENST00000496076 S100A16Q96FQ6 103 aaKnown RBP0.06□□□□□ -2.4
CLTC-208ENST00000496076 MRPL34Q9BQ48 92 aaKnown RBP0.06□□□□□ -2.4
CLTC-208ENST00000496076 IQSEC2Q5JU85 1478 aa0.05□□□□□ -2.4
CLTC-208ENST00000496076 RGPD4Q7Z3J3 1758 aa0.05□□□□□ -2.4
CLTC-208ENST00000496076 NEXMIFQ5QGS0 1516 aa0.05□□□□□ -2.4
CLTC-208ENST00000496076 IQCF6A8MYZ5 107 aa0.05□□□□□ -2.4
CLTC-208ENST00000496076 CYB5AP00167 134 aa0.05□□□□□ -2.4
CLTC-208ENST00000496076 HMCN2Q8NDA2 5059 aa0.04□□□□□ -2.4
CLTC-208ENST00000496076 PLGLAQ15195 96 aa0.04□□□□□ -2.4
CLTC-208ENST00000496076 UBR1Q8IWV7 1749 aa0.04□□□□□ -2.4
CLTC-208ENST00000496076 MYCBP2O75592 4640 aa0.04□□□□□ -2.4
CLTC-208ENST00000496076 CSPG4Q6UVK1 2322 aa0.03□□□□□ -2.4
CLTC-208ENST00000496076 SMARCA2P51531 1590 aa0.03□□□□□ -2.4
CLTC-208ENST00000496076 A0A1B0GUT8 65 aa0.03□□□□□ -2.4
CLTC-208ENST00000496076 PVALEFA0A1B0GWK0 134 aa0.03□□□□□ -2.4
CLTC-208ENST00000496076 SPRR2DP22532 72 aa0.03□□□□□ -2.4
CLTC-208ENST00000496076 HEPN1Q6WQI6 88 aa0.03□□□□□ -2.4
CLTC-208ENST00000496076 HUWE1Q7Z6Z7 4374 aaKnown RBP0.03□□□□□ -2.4
CLTC-208ENST00000496076 RGPD3A6NKT7 1758 aaPredicted RBP0.03□□□□□ -2.4
CLTC-208ENST00000496076 PKD1L1Q8TDX9 2849 aa0.02□□□□□ -2.41
CLTC-208ENST00000496076 PKD1L3Q7Z443 1732 aa0.02□□□□□ -2.41
CLTC-208ENST00000496076 KIAA1551Q9HCM1 1747 aa0.02□□□□□ -2.41
CLTC-208ENST00000496076 KIF20BQ96Q89 1820 aa0.02□□□□□ -2.41
CLTC-208ENST00000496076 GNG2P59768 71 aa0.02□□□□□ -2.41
CLTC-208ENST00000496076 C9orf62Q8N4C0 152 aa0.02□□□□□ -2.41
CLTC-208ENST00000496076 PLIN4Q96Q06 1357 aa0.02□□□□□ -2.41
CLTC-208ENST00000496076 COL14A1Q05707 1796 aaKnown RBP0.01□□□□□ -2.41
CLTC-208ENST00000496076 ABCC3O15438 1527 aa0.01□□□□□ -2.41
CLTC-208ENST00000496076 LRRC7Q96NW7 1537 aa0.01□□□□□ -2.41
CLTC-208ENST00000496076 TNXBP22105 4242 aa0.01□□□□□ -2.41
CLTC-208ENST00000496076 MYMXA0A1B0GTQ4 84 aa0□□□□□ -2.41
CLTC-208ENST00000496076 COX7BP24311 80 aa0□□□□□ -2.41
CLTC-208ENST00000496076 LELP1Q5T871 98 aa0□□□□□ -2.41
CLTC-208ENST00000496076 GAFA1Q96PS6 74 aa0□□□□□ -2.41
CLTC-208ENST00000496076 NSD1Q96L73 2696 aaPredicted RBP-0□□□□□ -2.41
CLTC-208ENST00000496076 ALKQ9UM73 1620 aa-0.01□□□□□ -2.41
CLTC-208ENST00000496076 MAGI2Q86UL8 1455 aa-0.01□□□□□ -2.41
CLTC-208ENST00000496076 FLNCQ14315 2725 aa-0.01□□□□□ -2.41
CLTC-208ENST00000496076 CCL22O00626 93 aa-0.01□□□□□ -2.41
CLTC-208ENST00000496076 SNRPFP62306 86 aaKnown RBP-0.01□□□□□ -2.41
CLTC-208ENST00000496076 RGPD2P0DJD1 1756 aa-0.01□□□□□ -2.41
CLTC-208ENST00000496076 ATRQ13535 2644 aa-0.01□□□□□ -2.41
CLTC-208ENST00000496076 ATP7BP35670 1465 aa-0.02□□□□□ -2.41
CLTC-208ENST00000496076 CLIP1P30622 1438 aa-0.02□□□□□ -2.41
CLTC-208ENST00000496076 SSPOA2VEC9 5147 aa-0.02□□□□□ -2.41
CLTC-208ENST00000496076 LPAP08519 4548 aa-0.03□□□□□ -2.41
CLTC-208ENST00000496076 MACF1Q9UPN3 7388 aaKnown RBP-0.03□□□□□ -2.41
CLTC-208ENST00000496076 M0R2T5 61 aa-0.03□□□□□ -2.41
CLTC-208ENST00000496076 LINC00643Q86TS7 51 aa-0.03□□□□□ -2.41
CLTC-208ENST00000496076 HSPG2P98160 4391 aa-0.03□□□□□ -2.41
CLTC-208ENST00000496076 FAT2Q9NYQ8 4349 aa-0.03□□□□□ -2.41
CLTC-208ENST00000496076 SPTA1P02549 2419 aa-0.04□□□□□ -2.42
CLTC-208ENST00000496076 CEBPZOSA8MTT3 80 aa-0.04□□□□□ -2.42
CLTC-208ENST00000496076 TDRG1Q3Y452 100 aa-0.04□□□□□ -2.42
CLTC-208ENST00000496076 WFDC9Q8NEX5 89 aa-0.04□□□□□ -2.42
CLTC-208ENST00000496076 CDKN2A-AS1Q9UH64 79 aa-0.04□□□□□ -2.42
CLTC-208ENST00000496076 RGPD1P0DJD0 1748 aa-0.04□□□□□ -2.42
CLTC-208ENST00000496076 UBR3Q6ZT12 1888 aa-0.05□□□□□ -2.42
CLTC-208ENST00000496076 TRAV21A0A0B4J279 112 aa-0.05□□□□□ -2.42
CLTC-208ENST00000496076 RABAC1Q9UI14 185 aa-0.05□□□□□ -2.42
CLTC-208ENST00000496076 BCORQ6W2J9 1755 aa-0.05□□□□□ -2.42
CLTC-208ENST00000496076 KIF14Q15058 1648 aa-0.05□□□□□ -2.42
CLTC-208ENST00000496076 QSER1Q2KHR3 1735 aa-0.06□□□□□ -2.42
CLTC-208ENST00000496076 RPL38P63173 70 aaKnown RBP-0.06□□□□□ -2.42
CLTC-208ENST00000496076 WFDC13Q8IUB5 93 aa-0.07□□□□□ -2.42
CLTC-208ENST00000496076 TMEM131LA2VDJ0 1609 aa-0.07□□□□□ -2.42
CLTC-208ENST00000496076 UACAQ9BZF9 1416 aa-0.07□□□□□ -2.42
CLTC-208ENST00000496076 KMT2AQ03164 3969 aa-0.07□□□□□ -2.42
CLTC-208ENST00000496076 LRRC9Q6ZRR7 1453 aa-0.08□□□□□ -2.42
CLTC-208ENST00000496076 EP300Q09472 2414 aaPredicted RBP-0.08□□□□□ -2.42
CLTC-208ENST00000496076 ACYP1P07311 99 aa-0.08□□□□□ -2.42
CLTC-208ENST00000496076 ALMS1Q8TCU4 4167 aa-0.09□□□□□ -2.42
CLTC-208ENST00000496076 DEFB135Q30KP9 77 aa-0.09□□□□□ -2.42
CLTC-208ENST00000496076 MAP1BP46821 2468 aaKnown RBP-0.09□□□□□ -2.42
CLTC-208ENST00000496076 SUPT6HQ7KZ85 1726 aaKnown RBP-0.1□□□□□ -2.42
CLTC-208ENST00000496076 PREX1Q8TCU6 1659 aa-0.1□□□□□ -2.43
CLTC-208ENST00000496076 CHD8Q9HCK8 2581 aa-0.1□□□□□ -2.43
CLTC-208ENST00000496076 KANTRA0A1W2PQU2 76 aa-0.1□□□□□ -2.43
CLTC-208ENST00000496076 PPLO60437 1756 aa-0.1□□□□□ -2.43
CLTC-208ENST00000496076 MAP3K4Q9Y6R4 1608 aa-0.1□□□□□ -2.43
CLTC-208ENST00000496076 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.12□□□□□ -2.43
CLTC-208ENST00000496076 BSNQ9UPA5 3926 aa-0.12□□□□□ -2.43
CLTC-208ENST00000496076 WNK1Q9H4A3 2382 aa-0.12□□□□□ -2.43
CLTC-208ENST00000496076 NDUFA3O95167 84 aa-0.12□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms