RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 GNG2P59768 71 aa1.48□□□□□ -2.17
SMC4-224ENST00000494612 PRCDQ00LT1 54 aa1.48□□□□□ -2.17
SMC4-224ENST00000494612 SMCO1Q147U7 214 aa1.48□□□□□ -2.17
SMC4-224ENST00000494612 SPINK13Q1W4C9 94 aa1.48□□□□□ -2.17
SMC4-224ENST00000494612 SPINK9Q5DT21 86 aa1.48□□□□□ -2.17
SMC4-224ENST00000494612 Q8N814 137 aa1.48□□□□□ -2.17
SMC4-224ENST00000494612 OR5H6Q8NGV6 325 aa1.48□□□□□ -2.17
SMC4-224ENST00000494612 BORCS5Q969J3 196 aa1.48□□□□□ -2.17
SMC4-224ENST00000494612 PDCD10Q9BUL8 212 aa1.48□□□□□ -2.17
SMC4-224ENST00000494612 ATG5Q9H1Y0 275 aa1.48□□□□□ -2.17
SMC4-224ENST00000494612 DPH3P1Q9H4G8 78 aa1.48□□□□□ -2.17
SMC4-224ENST00000494612 RPRMQ9NS64 109 aa1.48□□□□□ -2.17
SMC4-224ENST00000494612 SPANXCQ9NY87 97 aa1.48□□□□□ -2.17
SMC4-224ENST00000494612 GSKIPQ9P0R6 139 aa1.48□□□□□ -2.17
SMC4-224ENST00000494612 FAT4Q6V0I7 4981 aa1.48□□□□□ -2.17
SMC4-224ENST00000494612 A0A096LPF7 62 aa1.47□□□□□ -2.17
SMC4-224ENST00000494612 TRAV13-1A0A0B4J241 112 aa1.47□□□□□ -2.17
SMC4-224ENST00000494612 TRAV12-1A0A0B4J245 112 aa1.47□□□□□ -2.17
SMC4-224ENST00000494612 K7EP13 123 aa1.47□□□□□ -2.17
SMC4-224ENST00000494612 PDCD5O14737 125 aa1.47□□□□□ -2.17
SMC4-224ENST00000494612 LYRM1O43325 122 aa1.47□□□□□ -2.17
SMC4-224ENST00000494612 RPL37AP61513 92 aaKnown RBP1.47□□□□□ -2.17
SMC4-224ENST00000494612 RPS25P62851 125 aaKnown RBP1.47□□□□□ -2.17
SMC4-224ENST00000494612 GNGT1P63211 74 aa1.47□□□□□ -2.17
SMC4-224ENST00000494612 ZNF818PQ6ZRF7 136 aa1.47□□□□□ -2.17
SMC4-224ENST00000494612 OR8I2Q8N0Y5 310 aa1.47□□□□□ -2.17
SMC4-224ENST00000494612 TMEM263Q8WUH6 116 aaKnown RBP1.47□□□□□ -2.17
SMC4-224ENST00000494612 MRPL36Q9P0J6 103 aaKnown RBP1.47□□□□□ -2.17
SMC4-224ENST00000494612 MUC2Q02817 5179 aa1.46□□□□□ -2.18
SMC4-224ENST00000494612 A0A087WX48 190 aa1.46□□□□□ -2.18
SMC4-224ENST00000494612 IFITM5A6NNB3 132 aa1.46□□□□□ -2.18
SMC4-224ENST00000494612 IGLC1P0CG04 106 aa1.46□□□□□ -2.18
SMC4-224ENST00000494612 MT1HL1P0DM35 61 aa1.46□□□□□ -2.18
SMC4-224ENST00000494612 SLC25A4P12235 298 aa1.46□□□□□ -2.18
SMC4-224ENST00000494612 ETV6P41212 452 aa1.46□□□□□ -2.18
SMC4-224ENST00000494612 KRTAP10-4P60372 401 aaPredicted RBP1.46□□□□□ -2.18
SMC4-224ENST00000494612 ROMO1P60602 79 aa1.46□□□□□ -2.18
SMC4-224ENST00000494612 HIST1H1AQ02539 215 aaPredicted RBP1.46□□□□□ -2.18
SMC4-224ENST00000494612 LYPD5Q6UWN5 251 aa1.46□□□□□ -2.18
SMC4-224ENST00000494612 WFDC10BQ8IUB3 73 aa1.46□□□□□ -2.18
SMC4-224ENST00000494612 BRK1Q8WUW1 75 aa1.46□□□□□ -2.18
SMC4-224ENST00000494612 RAB37Q96AX2 223 aa1.46□□□□□ -2.18
SMC4-224ENST00000494612 PRELID3AQ96N28 172 aa1.46□□□□□ -2.18
SMC4-224ENST00000494612 NAA38Q9BRA0 125 aaKnown RBP1.46□□□□□ -2.18
SMC4-224ENST00000494612 IGKV2D-26A0A0A0MRZ7 120 aa1.45□□□□□ -2.18
SMC4-224ENST00000494612 TRGV1A0A0A0MS02 117 aa1.45□□□□□ -2.18
SMC4-224ENST00000494612 BORCS7-ASMTA0A0B4J1R7 106 aa1.45□□□□□ -2.18
SMC4-224ENST00000494612 LOC107984640A0A0U1RRK4 108 aa1.45□□□□□ -2.18
SMC4-224ENST00000494612 CCDC160A6NGH7 325 aa1.45□□□□□ -2.18
SMC4-224ENST00000494612 A8MTW9 85 aa1.45□□□□□ -2.18
SMC4-224ENST00000494612 SNRPGP15A8MWD9 76 aa1.45□□□□□ -2.18
SMC4-224ENST00000494612 CKS1BP61024 79 aa1.45□□□□□ -2.18
SMC4-224ENST00000494612 MRPS36P82909 103 aaKnown RBP1.45□□□□□ -2.18
SMC4-224ENST00000494612 PDE6HQ13956 83 aa1.45□□□□□ -2.18
SMC4-224ENST00000494612 CIRBPQ14011 172 aaKnown RBP1.45□□□□□ -2.18
SMC4-224ENST00000494612 TDRG1Q3Y452 100 aa1.45□□□□□ -2.18
SMC4-224ENST00000494612 TEX261Q6UWH6 196 aa1.45□□□□□ -2.18
SMC4-224ENST00000494612 C8orf59Q8N0T1 100 aaPredicted RBP1.45□□□□□ -2.18
SMC4-224ENST00000494612 HYLS1Q96M11 299 aa1.45□□□□□ -2.18
SMC4-224ENST00000494612 AP1S3Q96PC3 154 aa1.45□□□□□ -2.18
SMC4-224ENST00000494612 NIT2Q9NQR4 276 aa1.45□□□□□ -2.18
SMC4-224ENST00000494612 PRO0255Q9UI72 69 aa1.45□□□□□ -2.18
SMC4-224ENST00000494612 TPRKBQ9Y3C4 175 aa1.45□□□□□ -2.18
SMC4-224ENST00000494612 U3KQ87 197 aa1.45□□□□□ -2.18
SMC4-224ENST00000494612 TRBV6-8A0A0A6YYG3 113 aa1.44□□□□□ -2.18
SMC4-224ENST00000494612 TRAV1-2A0A0B4J238 106 aa1.44□□□□□ -2.18
SMC4-224ENST00000494612 TRAV12-3A0A0B4J271 114 aa1.44□□□□□ -2.18
SMC4-224ENST00000494612 TRBV27A0A0K0K1C4 114 aa1.44□□□□□ -2.18
SMC4-224ENST00000494612 A0A1B0GX51 115 aa1.44□□□□□ -2.18
SMC4-224ENST00000494612 hDV103S1A0JD37 113 aa1.44□□□□□ -2.18
SMC4-224ENST00000494612 CRYM-AS1A6NIL9 109 aa1.44□□□□□ -2.18
SMC4-224ENST00000494612 CEBPZOSA8MTT3 80 aa1.44□□□□□ -2.18
SMC4-224ENST00000494612 C9JAW5 83 aa1.44□□□□□ -2.18
SMC4-224ENST00000494612 DPM2O94777 84 aa1.44□□□□□ -2.18
SMC4-224ENST00000494612 IGHV3-30P01768 117 aa1.44□□□□□ -2.18
SMC4-224ENST00000494612 IGHV3-33P01772 117 aa1.44□□□□□ -2.18
SMC4-224ENST00000494612 IGHV3-30-5P0DP03 117 aa1.44□□□□□ -2.18
SMC4-224ENST00000494612 S100A12P80511 92 aa1.44□□□□□ -2.18
SMC4-224ENST00000494612 WFDC2Q14508 124 aa1.44□□□□□ -2.18
SMC4-224ENST00000494612 LELP1Q5T871 98 aa1.44□□□□□ -2.18
SMC4-224ENST00000494612 C2orf82Q6UX34 121 aa1.44□□□□□ -2.18
SMC4-224ENST00000494612 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.44□□□□□ -2.18
SMC4-224ENST00000494612 TMEM91Q6ZNR0 172 aa1.44□□□□□ -2.18
SMC4-224ENST00000494612 TP53RKQ96S44 253 aa1.44□□□□□ -2.18
SMC4-224ENST00000494612 GGACTQ9BVM4 153 aa1.44□□□□□ -2.18
SMC4-224ENST00000494612 FXYD6Q9H0Q3 95 aa1.44□□□□□ -2.18
SMC4-224ENST00000494612 HIGD1AQ9Y241 93 aa1.44□□□□□ -2.18
SMC4-224ENST00000494612 LPAP08519 4548 aa1.43□□□□□ -2.18
SMC4-224ENST00000494612 PITX3O75364 302 aa1.43□□□□□ -2.18
SMC4-224ENST00000494612 HYPMO75409 117 aa1.43□□□□□ -2.18
SMC4-224ENST00000494612 ERC2-IT1O76042 136 aa1.43□□□□□ -2.18
SMC4-224ENST00000494612 CFDP00746 253 aaPredicted RBP1.43□□□□□ -2.18
SMC4-224ENST00000494612 MT-ND4LP03901 98 aa1.43□□□□□ -2.18
SMC4-224ENST00000494612 TPT1P13693 172 aaKnown RBP1.43□□□□□ -2.18
SMC4-224ENST00000494612 FOXA3P55318 350 aaPredicted RBP1.43□□□□□ -2.18
SMC4-224ENST00000494612 LINC01556Q5JQF7 62 aa1.43□□□□□ -2.18
SMC4-224ENST00000494612 C1orf137Q5JT78 98 aa1.43□□□□□ -2.18
SMC4-224ENST00000494612 TCTE3Q8IZS6 198 aa1.43□□□□□ -2.18
SMC4-224ENST00000494612 ATP6V0E2Q8NHE4 81 aa1.43□□□□□ -2.18
SMC4-224ENST00000494612 SCN3BQ9NY72 215 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms