RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 RPS28P62857 69 aaKnown RBP8.93□□□□□ -0.98
SHOX2-205ENST00000490689 FAM30AQ9NZY2 134 aa8.92□□□□□ -0.98
SHOX2-205ENST00000490689 PSCAO43653 123 aa8.92□□□□□ -0.98
SHOX2-205ENST00000490689 C9orf66Q5T8R8 295 aa8.92□□□□□ -0.98
SHOX2-205ENST00000490689 TRAV10A0A0B4J240 114 aa8.91□□□□□ -0.98
SHOX2-205ENST00000490689 LYRM9A8MSI8 78 aa8.91□□□□□ -0.98
SHOX2-205ENST00000490689 ATRQ13535 2644 aa8.91□□□□□ -0.98
SHOX2-205ENST00000490689 MUC7Q8TAX7 377 aa8.9□□□□□ -0.98
SHOX2-205ENST00000490689 HECTD1Q9ULT8 2610 aa8.9□□□□□ -0.98
SHOX2-205ENST00000490689 C10orf25Q5T742 122 aa8.9□□□□□ -0.98
SHOX2-205ENST00000490689 RPL37AP8A6NKH3 93 aa8.9□□□□□ -0.99
SHOX2-205ENST00000490689 NDUFC1O43677 76 aa8.89□□□□□ -0.99
SHOX2-205ENST00000490689 IGLV1-51P01701 117 aa8.89□□□□□ -0.99
SHOX2-205ENST00000490689 A0A096LNI7 61 aa8.89□□□□□ -0.99
SHOX2-205ENST00000490689 CFAP46Q8IYW2 2715 aa8.89□□□□□ -0.99
SHOX2-205ENST00000490689 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.88□□□□□ -0.99
SHOX2-205ENST00000490689 CSMD1Q96PZ7 3565 aa8.88□□□□□ -0.99
SHOX2-205ENST00000490689 RELNP78509 3460 aa8.88□□□□□ -0.99
SHOX2-205ENST00000490689 NANOS2P60321 138 aaKnown RBP8.88□□□□□ -0.99
SHOX2-205ENST00000490689 TMEM254Q8TBM7 123 aa8.88□□□□□ -0.99
SHOX2-205ENST00000490689 SMG1Q96Q15 3661 aaKnown RBP8.88□□□□□ -0.99
SHOX2-205ENST00000490689 TEX15Q9BXT5 2789 aa8.88□□□□□ -0.99
SHOX2-205ENST00000490689 MP68P56378 58 aa8.87□□□□□ -0.99
SHOX2-205ENST00000490689 TRBV7-6A0A0J9YX20 115 aa8.87□□□□□ -0.99
SHOX2-205ENST00000490689 A0A1B0GUV1 79 aa8.87□□□□□ -0.99
SHOX2-205ENST00000490689 ZANQ9Y493 2812 aa8.86□□□□□ -0.99
SHOX2-205ENST00000490689 SPATA3Q8NHX4 192 aa8.86□□□□□ -0.99
SHOX2-205ENST00000490689 WFDC13Q8IUB5 93 aa8.86□□□□□ -0.99
SHOX2-205ENST00000490689 UNC79Q9P2D8 2635 aa8.86□□□□□ -0.99
SHOX2-205ENST00000490689 HIGD2AQ9BW72 106 aa8.86□□□□□ -0.99
SHOX2-205ENST00000490689 IGKV2-24A0A0C4DH68 120 aa8.85□□□□□ -0.99
SHOX2-205ENST00000490689 M0R378 163 aa8.85□□□□□ -0.99
SHOX2-205ENST00000490689 WFDC10BQ8IUB3 73 aa8.85□□□□□ -0.99
SHOX2-205ENST00000490689 C2orf48Q96LS8 159 aa8.85□□□□□ -0.99
SHOX2-205ENST00000490689 TM2D3Q9BRN9 247 aa8.85□□□□□ -0.99
SHOX2-205ENST00000490689 LELP1Q5T871 98 aa8.85□□□□□ -0.99
SHOX2-205ENST00000490689 CYSTM1Q9H1C7 97 aa8.85□□□□□ -0.99
SHOX2-205ENST00000490689 FLNBO75369 2602 aaKnown RBP8.84□□□□□ -0.99
SHOX2-205ENST00000490689 SPTSSBQ8NFR3 76 aa8.84□□□□□ -0.99
SHOX2-205ENST00000490689 SYCNQ0VAF6 134 aa8.84□□□□□ -0.99
SHOX2-205ENST00000490689 Q6ZQT0 140 aa8.84□□□□□ -0.99
SHOX2-205ENST00000490689 C1orf195Q5TG92 126 aa8.83□□□□□ -1
SHOX2-205ENST00000490689 NDUFS5O43920 106 aa8.82□□□□□ -1
SHOX2-205ENST00000490689 UBE2DNLQ8IWF7 75 aa8.82□□□□□ -1
SHOX2-205ENST00000490689 PRYO14603 147 aa8.82□□□□□ -1
SHOX2-205ENST00000490689 LINC01600Q96MT4 127 aa8.82□□□□□ -1
SHOX2-205ENST00000490689 V9GYY9 64 aa8.82□□□□□ -1
SHOX2-205ENST00000490689 KPRPQ5T749 579 aaPredicted RBP8.81□□□□□ -1
SHOX2-205ENST00000490689 A0A0J9YWU9 116 aa8.81□□□□□ -1
SHOX2-205ENST00000490689 SMR3AQ99954 134 aa8.81□□□□□ -1
SHOX2-205ENST00000490689 ATP5EP56381 51 aaPredicted RBP8.8□□□□□ -1
SHOX2-205ENST00000490689 PSPHP1O15172 72 aa8.8□□□□□ -1
SHOX2-205ENST00000490689 CDK2AP2O75956 126 aa8.8□□□□□ -1
SHOX2-205ENST00000490689 DEFB116Q30KQ4 102 aa8.8□□□□□ -1
SHOX2-205ENST00000490689 PRO0628Q9UI54 55 aa8.8□□□□□ -1
SHOX2-205ENST00000490689 LINC00474Q9P2X8 69 aa8.79□□□□□ -1
SHOX2-205ENST00000490689 H0Y9J4 135 aa8.78□□□□□ -1
SHOX2-205ENST00000490689 M0R2N4 97 aa8.78□□□□□ -1
SHOX2-205ENST00000490689 CXCL6P80162 114 aa8.77□□□□□ -1
SHOX2-205ENST00000490689 Q6ZRU5 148 aa8.77□□□□□ -1.01
SHOX2-205ENST00000490689 MGAM2Q2M2H8 2515 aa8.77□□□□□ -1.01
SHOX2-205ENST00000490689 C1orf137Q5JT78 98 aa8.76□□□□□ -1.01
SHOX2-205ENST00000490689 LINC00336Q6ZUF6 198 aa8.76□□□□□ -1.01
SHOX2-205ENST00000490689 HRNRQ86YZ3 2850 aaPredicted RBP8.76□□□□□ -1.01
SHOX2-205ENST00000490689 C6orf48Q9UBA6 75 aa8.76□□□□□ -1.01
SHOX2-205ENST00000490689 EGFEM1PQ0D2K5 195 aa8.75□□□□□ -1.01
SHOX2-205ENST00000490689 RETNQ9HD89 108 aa8.75□□□□□ -1.01
SHOX2-205ENST00000490689 DEFB131BA0A096LNP1 70 aa8.75□□□□□ -1.01
SHOX2-205ENST00000490689 GIG44P09565 113 aaPredicted RBP8.75□□□□□ -1.01
SHOX2-205ENST00000490689 LY6G6DO95868 133 aa8.74□□□□□ -1.01
SHOX2-205ENST00000490689 DCHS2Q6V1P9 2916 aa8.74□□□□□ -1.01
SHOX2-205ENST00000490689 CR1P17927 2039 aa8.73□□□□□ -1.01
SHOX2-205ENST00000490689 ESRGQ1W209 222 aa8.73□□□□□ -1.01
SHOX2-205ENST00000490689 SMIM29Q86T20 159 aa8.73□□□□□ -1.01
SHOX2-205ENST00000490689 INAFM1C9JVW0 142 aa8.72□□□□□ -1.01
SHOX2-205ENST00000490689 H7BZZ5 65 aa8.72□□□□□ -1.01
SHOX2-205ENST00000490689 PLAC8L1A1L4L8 177 aa8.72□□□□□ -1.01
SHOX2-205ENST00000490689 IGHV4-30-4P0DP06 118 aa8.72□□□□□ -1.01
SHOX2-205ENST00000490689 C11orf45Q8TAV5 145 aa8.72□□□□□ -1.01
SHOX2-205ENST00000490689 LINC00208Q96KT6 92 aa8.72□□□□□ -1.01
SHOX2-205ENST00000490689 LOC110117498A0A087WWA1 95 aa8.72□□□□□ -1.01
SHOX2-205ENST00000490689 UBR5O95071 2799 aaPredicted RBP8.71□□□□□ -1.01
SHOX2-205ENST00000490689 NF1P21359 2839 aa8.71□□□□□ -1.01
SHOX2-205ENST00000490689 KIAA0087Q14695 138 aa8.71□□□□□ -1.01
SHOX2-205ENST00000490689 C22orf24Q9Y442 160 aa8.71□□□□□ -1.01
SHOX2-205ENST00000490689 SVEP1Q4LDE5 3571 aa8.71□□□□□ -1.02
SHOX2-205ENST00000490689 UBE2AP49459 152 aa8.71□□□□□ -1.02
SHOX2-205ENST00000490689 X6R8D5 127 aa8.71□□□□□ -1.02
SHOX2-205ENST00000490689 FBN2P35556 2912 aa8.71□□□□□ -1.02
SHOX2-205ENST00000490689 UTP20O75691 2785 aaKnown RBP8.71□□□□□ -1.02
SHOX2-205ENST00000490689 LYPD5Q6UWN5 251 aa8.7□□□□□ -1.02
SHOX2-205ENST00000490689 DHRS4-AS1Q9P1J3 65 aa8.7□□□□□ -1.02
SHOX2-205ENST00000490689 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.7□□□□□ -1.02
SHOX2-205ENST00000490689 OXLD1Q5BKU9 147 aa8.7□□□□□ -1.02
SHOX2-205ENST00000490689 Q6ZTC4 211 aa8.69□□□□□ -1.02
SHOX2-205ENST00000490689 NDUFB1O75438 58 aa8.69□□□□□ -1.02
SHOX2-205ENST00000490689 IL17DQ8TAD2 202 aa8.69□□□□□ -1.02
SHOX2-205ENST00000490689 J3QKU1 62 aa8.69□□□□□ -1.02
SHOX2-205ENST00000490689 CHKB-CPT1BH3BT56 60 aa8.69□□□□□ -1.02
SHOX2-205ENST00000490689 CUBNO60494 3623 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms