RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 ALKQ9UM73 1620 aa0.37□□□□□ -2.35
NF1-213ENST00000489712 ATP7BP35670 1465 aa0.36□□□□□ -2.35
NF1-213ENST00000489712 MAGI2Q86UL8 1455 aa0.36□□□□□ -2.35
NF1-213ENST00000489712 CCL22O00626 93 aa0.36□□□□□ -2.35
NF1-213ENST00000489712 DEFB105AQ8NG35 78 aa0.36□□□□□ -2.35
NF1-213ENST00000489712 GAFA1Q96PS6 74 aa0.36□□□□□ -2.35
NF1-213ENST00000489712 SPTBN2O15020 2390 aa0.36□□□□□ -2.35
NF1-213ENST00000489712 USF3Q68DE3 2245 aa0.36□□□□□ -2.35
NF1-213ENST00000489712 FMN2Q9NZ56 1722 aa0.35□□□□□ -2.35
NF1-213ENST00000489712 F8P00451 2351 aa0.35□□□□□ -2.35
NF1-213ENST00000489712 DOPEY2Q9Y3R5 2298 aa0.35□□□□□ -2.35
NF1-213ENST00000489712 FRAS1Q86XX4 4008 aa0.35□□□□□ -2.35
NF1-213ENST00000489712 ZNF292O60281 2723 aa0.35□□□□□ -2.35
NF1-213ENST00000489712 COX7BP24311 80 aa0.35□□□□□ -2.35
NF1-213ENST00000489712 WFDC9Q8NEX5 89 aa0.35□□□□□ -2.35
NF1-213ENST00000489712 APLNQ9ULZ1 77 aa0.35□□□□□ -2.35
NF1-213ENST00000489712 CLIP1P30622 1438 aa0.35□□□□□ -2.35
NF1-213ENST00000489712 C2CD3Q4AC94 2353 aa0.35□□□□□ -2.35
NF1-213ENST00000489712 URB2Q14146 1524 aaKnown RBP0.34□□□□□ -2.35
NF1-213ENST00000489712 LRRC7Q96NW7 1537 aa0.34□□□□□ -2.35
NF1-213ENST00000489712 MRPL34Q9BQ48 92 aaKnown RBP0.34□□□□□ -2.36
NF1-213ENST00000489712 NKTRP30414 1462 aaKnown RBP0.34□□□□□ -2.36
NF1-213ENST00000489712 ARHGAP35Q9NRY4 1499 aa0.34□□□□□ -2.36
NF1-213ENST00000489712 SLIT1O75093 1534 aa0.33□□□□□ -2.36
NF1-213ENST00000489712 DCAF1Q9Y4B6 1507 aa0.33□□□□□ -2.36
NF1-213ENST00000489712 QSER1Q2KHR3 1735 aa0.33□□□□□ -2.36
NF1-213ENST00000489712 URB1O60287 2271 aaKnown RBP0.33□□□□□ -2.36
NF1-213ENST00000489712 TRAV21A0A0B4J279 112 aa0.33□□□□□ -2.36
NF1-213ENST00000489712 KRTAP21-1Q3LI58 79 aa0.33□□□□□ -2.36
NF1-213ENST00000489712 ATP5EP2Q5VTU8 51 aa0.33□□□□□ -2.36
NF1-213ENST00000489712 HEPN1Q6WQI6 88 aa0.33□□□□□ -2.36
NF1-213ENST00000489712 ERVK-7P63135 1459 aa0.33□□□□□ -2.36
NF1-213ENST00000489712 USP24Q9UPU5 2620 aa0.33□□□□□ -2.36
NF1-213ENST00000489712 PTPRZ1P23471 2315 aaPredicted RBP0.32□□□□□ -2.36
NF1-213ENST00000489712 PTPRQQ9UMZ3 2332 aa0.32□□□□□ -2.36
NF1-213ENST00000489712 RGPD2P0DJD1 1756 aa0.32□□□□□ -2.36
NF1-213ENST00000489712 BCORQ6W2J9 1755 aa0.32□□□□□ -2.36
NF1-213ENST00000489712 PIEZO1Q92508 2521 aa0.32□□□□□ -2.36
NF1-213ENST00000489712 TMEM131LA2VDJ0 1609 aa0.32□□□□□ -2.36
NF1-213ENST00000489712 PIEZO2Q9H5I5 2752 aa0.32□□□□□ -2.36
NF1-213ENST00000489712 A0A087WXM4 84 aa0.32□□□□□ -2.36
NF1-213ENST00000489712 LOC730098B7Z3J9 87 aa0.32□□□□□ -2.36
NF1-213ENST00000489712 H3BUT2 72 aa0.32□□□□□ -2.36
NF1-213ENST00000489712 ABCC1P33527 1531 aa0.32□□□□□ -2.36
NF1-213ENST00000489712 NAV2Q8IVL1 2488 aa0.31□□□□□ -2.36
NF1-213ENST00000489712 OTOGQ6ZRI0 2925 aa0.31□□□□□ -2.36
NF1-213ENST00000489712 PKDREJQ9NTG1 2253 aa0.31□□□□□ -2.36
NF1-213ENST00000489712 ANKRD17O75179 2603 aaKnown RBP0.31□□□□□ -2.36
NF1-213ENST00000489712 PHGR1C9JFL3 82 aa0.31□□□□□ -2.36
NF1-213ENST00000489712 IFI27P40305 119 aaPredicted RBP0.31□□□□□ -2.36
NF1-213ENST00000489712 CDKN2A-AS1Q9UH64 79 aa0.31□□□□□ -2.36
NF1-213ENST00000489712 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.31□□□□□ -2.36
NF1-213ENST00000489712 LTN1O94822 1766 aa0.31□□□□□ -2.36
NF1-213ENST00000489712 IGF2RP11717 2491 aa0.3□□□□□ -2.36
NF1-213ENST00000489712 KDM5DQ9BY66 1539 aa0.3□□□□□ -2.36
NF1-213ENST00000489712 UMAD1C9J7I0 102 aa0.3□□□□□ -2.36
NF1-213ENST00000489712 KLK9Q2XQG4 91 aa0.3□□□□□ -2.36
NF1-213ENST00000489712 BVES-AS1Q5T3Y7 98 aa0.3□□□□□ -2.36
NF1-213ENST00000489712 GPR98Q8WXG9 6306 aa0.3□□□□□ -2.36
NF1-213ENST00000489712 RGPD1P0DJD0 1748 aa0.3□□□□□ -2.36
NF1-213ENST00000489712 RGPD8O14715 1765 aaPredicted RBP0.29□□□□□ -2.36
NF1-213ENST00000489712 RGPD5Q99666 1765 aa0.29□□□□□ -2.36
NF1-213ENST00000489712 ZFYVE26Q68DK2 2539 aa0.29□□□□□ -2.36
NF1-213ENST00000489712 DIP2BQ9P265 1576 aa0.29□□□□□ -2.36
NF1-213ENST00000489712 H1FX-AS1Q4G0G2 97 aa0.29□□□□□ -2.36
NF1-213ENST00000489712 COX6B2Q6YFQ2 88 aa0.29□□□□□ -2.36
NF1-213ENST00000489712 TIAM2Q8IVF5 1701 aa0.29□□□□□ -2.36
NF1-213ENST00000489712 RRBP1Q9P2E9 1410 aaKnown RBP0.29□□□□□ -2.36
NF1-213ENST00000489712 NCOA2Q15596 1464 aa0.29□□□□□ -2.36
NF1-213ENST00000489712 PIK3C2BO00750 1634 aa0.28□□□□□ -2.36
NF1-213ENST00000489712 UNC79Q9P2D8 2635 aa0.28□□□□□ -2.36
NF1-213ENST00000489712 PREX1Q8TCU6 1659 aa0.28□□□□□ -2.36
NF1-213ENST00000489712 SMIM13P0DJ93 91 aa0.28□□□□□ -2.36
NF1-213ENST00000489712 HMGA1P17096 107 aaKnown RBP0.28□□□□□ -2.36
NF1-213ENST00000489712 DEFB121Q5J5C9 76 aa0.28□□□□□ -2.36
NF1-213ENST00000489712 AKAP6Q13023 2319 aa0.28□□□□□ -2.36
NF1-213ENST00000489712 ANKARQ7Z5J8 1434 aa0.28□□□□□ -2.37
NF1-213ENST00000489712 CFAP74Q9C0B2 1584 aa0.28□□□□□ -2.37
NF1-213ENST00000489712 POLR1AO95602 1720 aaPredicted RBP0.27□□□□□ -2.37
NF1-213ENST00000489712 C18orf32Q8TCD1 76 aa0.27□□□□□ -2.37
NF1-213ENST00000489712 MAGI3Q5TCQ9 1506 aa0.27□□□□□ -2.37
NF1-213ENST00000489712 SPTBN1Q01082 2364 aaKnown RBP0.26□□□□□ -2.37
NF1-213ENST00000489712 CCDC88BA6NC98 1476 aa0.26□□□□□ -2.37
NF1-213ENST00000489712 PTPN23Q9H3S7 1636 aa0.26□□□□□ -2.37
NF1-213ENST00000489712 TENM4Q6N022 2769 aa0.26□□□□□ -2.37
NF1-213ENST00000489712 ARFGEF2Q9Y6D5 1785 aa0.25□□□□□ -2.37
NF1-213ENST00000489712 IFI6P09912 130 aa0.25□□□□□ -2.37
NF1-213ENST00000489712 NREPQ16612 68 aa0.25□□□□□ -2.37
NF1-213ENST00000489712 WFDC13Q8IUB5 93 aa0.25□□□□□ -2.37
NF1-213ENST00000489712 NCOR2Q9Y618 2525 aa0.25□□□□□ -2.37
NF1-213ENST00000489712 VWFP04275 2813 aa0.24□□□□□ -2.37
NF1-213ENST00000489712 USP32Q8NFA0 1604 aa0.24□□□□□ -2.37
NF1-213ENST00000489712 MAST4O15021 2626 aa0.24□□□□□ -2.37
NF1-213ENST00000489712 NWD1Q149M9 1564 aa0.24□□□□□ -2.37
NF1-213ENST00000489712 CEP170BQ9Y4F5 1589 aaPredicted RBP0.24□□□□□ -2.37
NF1-213ENST00000489712 ANK2Q01484 3957 aa0.24□□□□□ -2.37
NF1-213ENST00000489712 DOT1LQ8TEK3 1739 aa0.24□□□□□ -2.37
NF1-213ENST00000489712 TNRC6CQ9HCJ0 1690 aaKnown RBP0.24□□□□□ -2.37
NF1-213ENST00000489712 WNK2Q9Y3S1 2297 aa0.24□□□□□ -2.37
NF1-213ENST00000489712 M0R2T5 61 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms