RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 CHTOPQ9Y3Y2 248 aaKnown RBP7.44□□□□□ -1.22
SRRM1-216ENST00000489130 IGKV2-28A0A075B6P5 120 aa7.43□□□□□ -1.22
SRRM1-216ENST00000489130 IGKV2D-28P01615 120 aa7.43□□□□□ -1.22
SRRM1-216ENST00000489130 IFI27L1Q96BM0 104 aa7.43□□□□□ -1.22
SRRM1-216ENST00000489130 TMEM223A0PJW6 202 aa7.42□□□□□ -1.22
SRRM1-216ENST00000489130 UBE2AP49459 152 aa7.42□□□□□ -1.22
SRRM1-216ENST00000489130 RPL24P83731 157 aaKnown RBP7.42□□□□□ -1.22
SRRM1-216ENST00000489130 CRYGAP11844 174 aa7.41□□□□□ -1.22
SRRM1-216ENST00000489130 Q8NDZ9 215 aa7.41□□□□□ -1.22
SRRM1-216ENST00000489130 CBLN2Q8IUK8 224 aa7.4□□□□□ -1.22
SRRM1-216ENST00000489130 TMEM126AQ9H061 195 aa7.4□□□□□ -1.22
SRRM1-216ENST00000489130 TMEM238C9JI98 176 aa7.39□□□□□ -1.23
SRRM1-216ENST00000489130 HSBP1O75506 76 aa7.39□□□□□ -1.23
SRRM1-216ENST00000489130 PRLHP81277 87 aa7.39□□□□□ -1.23
SRRM1-216ENST00000489130 TYMSOSQ8TAI1 123 aa7.39□□□□□ -1.23
SRRM1-216ENST00000489130 RNF213Q63HN8 5207 aa7.39□□□□□ -1.23
SRRM1-216ENST00000489130 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.38□□□□□ -1.23
SRRM1-216ENST00000489130 M0R378 163 aa7.38□□□□□ -1.23
SRRM1-216ENST00000489130 LINC00158P58513 81 aa7.38□□□□□ -1.23
SRRM1-216ENST00000489130 FAM229BQ4G0N7 80 aa7.38□□□□□ -1.23
SRRM1-216ENST00000489130 FAM19A2Q8N3H0 131 aa7.38□□□□□ -1.23
SRRM1-216ENST00000489130 ANAPC11Q9NYG5 84 aa7.38□□□□□ -1.23
SRRM1-216ENST00000489130 TRGC2P03986 189 aa7.37□□□□□ -1.23
SRRM1-216ENST00000489130 PRR4Q16378 134 aa7.37□□□□□ -1.23
SRRM1-216ENST00000489130 KRTAP13-2Q52LG2 175 aa7.37□□□□□ -1.23
SRRM1-216ENST00000489130 FAM19A1Q7Z5A9 133 aa7.37□□□□□ -1.23
SRRM1-216ENST00000489130 A0A0U1RRA0 63 aa7.35□□□□□ -1.23
SRRM1-216ENST00000489130 TSPAN13O95857 204 aa7.35□□□□□ -1.23
SRRM1-216ENST00000489130 SMIM13P0DJ93 91 aa7.35□□□□□ -1.23
SRRM1-216ENST00000489130 LINC00310P59036 64 aa7.35□□□□□ -1.23
SRRM1-216ENST00000489130 HERV-K104P63124 156 aa7.35□□□□□ -1.23
SRRM1-216ENST00000489130 KRTAP9-2Q9BYQ4 174 aa7.34□□□□□ -1.23
SRRM1-216ENST00000489130 SERF1AO75920 110 aa7.33□□□□□ -1.24
SRRM1-216ENST00000489130 LEPROTL1O95214 131 aa7.33□□□□□ -1.24
SRRM1-216ENST00000489130 MEIG1Q5JSS6 88 aa7.33□□□□□ -1.24
SRRM1-216ENST00000489130 MIR7-3HGQ8N6C7 128 aa7.33□□□□□ -1.24
SRRM1-216ENST00000489130 PLEKHB2Q96CS7 222 aa7.33□□□□□ -1.24
SRRM1-216ENST00000489130 NDUFA12Q9UI09 145 aa7.33□□□□□ -1.24
SRRM1-216ENST00000489130 LINC00587B1AMM8 73 aa7.32□□□□□ -1.24
SRRM1-216ENST00000489130 H0Y8G0 127 aa7.32□□□□□ -1.24
SRRM1-216ENST00000489130 ATP6V1G1O75348 118 aa7.32□□□□□ -1.24
SRRM1-216ENST00000489130 BOD1L2Q8IYS8 172 aa7.32□□□□□ -1.24
SRRM1-216ENST00000489130 IGKV2D-26A0A0A0MRZ7 120 aa7.31□□□□□ -1.24
SRRM1-216ENST00000489130 KRTAP9-6A0A140TA67 174 aa7.31□□□□□ -1.24
SRRM1-216ENST00000489130 MYMXA0A1B0GTQ4 84 aa7.31□□□□□ -1.24
SRRM1-216ENST00000489130 PLNP26678 52 aa7.31□□□□□ -1.24
SRRM1-216ENST00000489130 LINC00304Q8N9R0 145 aa7.31□□□□□ -1.24
SRRM1-216ENST00000489130 HSPB8Q9UJY1 196 aa7.31□□□□□ -1.24
SRRM1-216ENST00000489130 PRYO14603 147 aa7.3□□□□□ -1.24
SRRM1-216ENST00000489130 SPRR1AP35321 89 aa7.3□□□□□ -1.24
SRRM1-216ENST00000489130 TSPEAR-AS2P59090 65 aa7.3□□□□□ -1.24
SRRM1-216ENST00000489130 HIGD2AQ9BW72 106 aa7.3□□□□□ -1.24
SRRM1-216ENST00000489130 MAP1LC3CQ9BXW4 147 aa7.3□□□□□ -1.24
SRRM1-216ENST00000489130 COLCA2A8K830 154 aa7.29□□□□□ -1.24
SRRM1-216ENST00000489130 NCR3O14931 201 aa7.29□□□□□ -1.24
SRRM1-216ENST00000489130 LEPROTO15243 131 aa7.29□□□□□ -1.24
SRRM1-216ENST00000489130 CTAG1AP78358 180 aa7.29□□□□□ -1.24
SRRM1-216ENST00000489130 SLC7A5P1Q8MH63 180 aa7.29□□□□□ -1.24
SRRM1-216ENST00000489130 LINC00337Q8N6G1 96 aa7.29□□□□□ -1.24
SRRM1-216ENST00000489130 KCNQ1DNQ9H478 68 aa7.29□□□□□ -1.24
SRRM1-216ENST00000489130 LOC107984156A0A0G2JMH3 177 aa7.28□□□□□ -1.24
SRRM1-216ENST00000489130 DPM2O94777 84 aa7.28□□□□□ -1.24
SRRM1-216ENST00000489130 ARL17AQ8IVW1 177 aa7.28□□□□□ -1.24
SRRM1-216ENST00000489130 SPRR4Q96PI1 79 aa7.28□□□□□ -1.24
SRRM1-216ENST00000489130 KRTAP4-16G5E9R7 235 aaPredicted RBP7.27□□□□□ -1.25
SRRM1-216ENST00000489130 J3QQQ9 107 aa7.27□□□□□ -1.25
SRRM1-216ENST00000489130 FABP4P15090 132 aa7.27□□□□□ -1.25
SRRM1-216ENST00000489130 C3orf22Q8N5N4 141 aa7.27□□□□□ -1.25
SRRM1-216ENST00000489130 TRBV10-3A0A0K0K1G6 114 aa7.26□□□□□ -1.25
SRRM1-216ENST00000489130 IGKCP01834 107 aa7.26□□□□□ -1.25
SRRM1-216ENST00000489130 NMUP48645 174 aa7.26□□□□□ -1.25
SRRM1-216ENST00000489130 HERVK_113P61574 105 aa7.26□□□□□ -1.25
SRRM1-216ENST00000489130 DAND5Q8N907 189 aa7.26□□□□□ -1.25
SRRM1-216ENST00000489130 PMCHL2Q9BQD1 86 aa7.26□□□□□ -1.25
SRRM1-216ENST00000489130 ZNF706Q9Y5V0 76 aaPredicted RBP7.26□□□□□ -1.25
SRRM1-216ENST00000489130 RETNLBQ9BQ08 111 aa7.25□□□□□ -1.25
SRRM1-216ENST00000489130 TRBV10-2A0A0K0K1G8 114 aa7.24□□□□□ -1.25
SRRM1-216ENST00000489130 MUC2Q02817 5179 aa7.23□□□□□ -1.25
SRRM1-216ENST00000489130 ETDCA0A1B0GVM5 59 aa7.23□□□□□ -1.25
SRRM1-216ENST00000489130 LGALS3P17931 250 aaKnown RBP7.23□□□□□ -1.25
SRRM1-216ENST00000489130 S100A12P80511 92 aa7.23□□□□□ -1.25
SRRM1-216ENST00000489130 SMCR5Q8TEV8 140 aa7.23□□□□□ -1.25
SRRM1-216ENST00000489130 DDTP30046 118 aa7.22□□□□□ -1.25
SRRM1-216ENST00000489130 SPAG11AQ6PDA7 123 aa7.22□□□□□ -1.25
SRRM1-216ENST00000489130 MIEN1Q9BRT3 115 aa7.22□□□□□ -1.25
SRRM1-216ENST00000489130 SPANXB1Q9NS25 103 aaPredicted RBP7.22□□□□□ -1.25
SRRM1-216ENST00000489130 B5MCH6 92 aa7.21□□□□□ -1.26
SRRM1-216ENST00000489130 E9PLD3 99 aa7.21□□□□□ -1.26
SRRM1-216ENST00000489130 NDUFC2O95298 119 aa7.21□□□□□ -1.26
SRRM1-216ENST00000489130 TPRXLQ17RH7 258 aa7.21□□□□□ -1.26
SRRM1-216ENST00000489130 LINC00483Q53H64 154 aa7.21□□□□□ -1.26
SRRM1-216ENST00000489130 IGLV6-57P01721 117 aa7.2□□□□□ -1.26
SRRM1-216ENST00000489130 IGLV7-46A0A075B6I9 117 aa7.19□□□□□ -1.26
SRRM1-216ENST00000489130 A0A0J9YXY3 114 aa7.19□□□□□ -1.26
SRRM1-216ENST00000489130 SYS1-DBNDD2H3BUS1 97 aa7.19□□□□□ -1.26
SRRM1-216ENST00000489130 HIST1H2BKO60814 126 aa7.19□□□□□ -1.26
SRRM1-216ENST00000489130 HIST1H2BJP06899 126 aa7.19□□□□□ -1.26
SRRM1-216ENST00000489130 HIST1H2BOP23527 126 aa7.19□□□□□ -1.26
SRRM1-216ENST00000489130 HIST1H2BBP33778 126 aa7.19□□□□□ -1.26
SRRM1-216ENST00000489130 HIST1H2BDP58876 126 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms