RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 IGLC2P0DOY2 106 aa1.81□□□□□ -2.12
PRPF38A-203ENST00000487160 EIF5AP63241 154 aaKnown RBP1.81□□□□□ -2.12
PRPF38A-203ENST00000487160 SMCO1Q147U7 214 aa1.81□□□□□ -2.12
PRPF38A-203ENST00000487160 RHOHQ15669 191 aa1.81□□□□□ -2.12
PRPF38A-203ENST00000487160 KHDC3LQ587J8 217 aa1.81□□□□□ -2.12
PRPF38A-203ENST00000487160 RNASE10Q5GAN6 216 aaKnown RBP1.81□□□□□ -2.12
PRPF38A-203ENST00000487160 DPPA3Q6W0C5 159 aa1.81□□□□□ -2.12
PRPF38A-203ENST00000487160 LINC00305Q7Z4B0 112 aa1.81□□□□□ -2.12
PRPF38A-203ENST00000487160 SNX29P2Q8IUI4 249 aa1.81□□□□□ -2.12
PRPF38A-203ENST00000487160 Q8TAT8 98 aa1.81□□□□□ -2.12
PRPF38A-203ENST00000487160 PRADC1Q9BSG0 188 aa1.81□□□□□ -2.12
PRPF38A-203ENST00000487160 AGPAT4-IT1Q9H0P7 198 aa1.81□□□□□ -2.12
PRPF38A-203ENST00000487160 NAA60Q9H7X0 242 aa1.81□□□□□ -2.12
PRPF38A-203ENST00000487160 PLAC8Q9NZF1 115 aa1.81□□□□□ -2.12
PRPF38A-203ENST00000487160 CACFD1Q9UGQ2 172 aa1.81□□□□□ -2.12
PRPF38A-203ENST00000487160 IGKV2-40A0A087WW87 121 aaPredicted RBP1.8□□□□□ -2.12
PRPF38A-203ENST00000487160 TRBV6-4A0A1B0GX49 114 aa1.8□□□□□ -2.12
PRPF38A-203ENST00000487160 M0R2P5 195 aa1.8□□□□□ -2.12
PRPF38A-203ENST00000487160 IGKV2D-40P01614 121 aaPredicted RBP1.8□□□□□ -2.12
PRPF38A-203ENST00000487160 CD3DP04234 171 aa1.8□□□□□ -2.12
PRPF38A-203ENST00000487160 NMBP08949 121 aa1.8□□□□□ -2.12
PRPF38A-203ENST00000487160 METTL15P1P0C7V9 234 aa1.8□□□□□ -2.12
PRPF38A-203ENST00000487160 LINC00694P0DN24 101 aa1.8□□□□□ -2.12
PRPF38A-203ENST00000487160 CFAP126Q5VTH2 177 aa1.8□□□□□ -2.12
PRPF38A-203ENST00000487160 A0A087WWC5 75 aa1.79□□□□□ -2.12
PRPF38A-203ENST00000487160 A0A087WX48 190 aa1.79□□□□□ -2.12
PRPF38A-203ENST00000487160 CRPP02741 224 aa1.79□□□□□ -2.12
PRPF38A-203ENST00000487160 TRGC2P03986 189 aa1.79□□□□□ -2.12
PRPF38A-203ENST00000487160 MGST1P10620 155 aaKnown RBP1.79□□□□□ -2.12
PRPF38A-203ENST00000487160 RRAS2P62070 204 aaPredicted RBP1.79□□□□□ -2.12
PRPF38A-203ENST00000487160 CNBPP62633 177 aaKnown RBP1.79□□□□□ -2.12
PRPF38A-203ENST00000487160 Q0VG73 95 aa1.79□□□□□ -2.12
PRPF38A-203ENST00000487160 SURF2Q15527 256 aaPredicted RBP1.79□□□□□ -2.12
PRPF38A-203ENST00000487160 TMEM128Q5BJH2 165 aa1.79□□□□□ -2.12
PRPF38A-203ENST00000487160 SPANXN5Q5MJ07 72 aa1.79□□□□□ -2.12
PRPF38A-203ENST00000487160 C10orf113Q5VZT2 155 aa1.79□□□□□ -2.12
PRPF38A-203ENST00000487160 ENHOQ6UWT2 76 aa1.79□□□□□ -2.12
PRPF38A-203ENST00000487160 SOSTDC1Q6X4U4 206 aa1.79□□□□□ -2.12
PRPF38A-203ENST00000487160 C7orf65Q6ZTY9 151 aa1.79□□□□□ -2.12
PRPF38A-203ENST00000487160 CST9LQ9H4G1 147 aa1.79□□□□□ -2.12
PRPF38A-203ENST00000487160 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.78□□□□□ -2.12
PRPF38A-203ENST00000487160 SMIM31A0A1B0GVY4 71 aa1.78□□□□□ -2.12
PRPF38A-203ENST00000487160 ANGP03950 147 aaKnown RBP1.78□□□□□ -2.12
PRPF38A-203ENST00000487160 CXCL1P09341 107 aa1.78□□□□□ -2.12
PRPF38A-203ENST00000487160 PYYP10082 97 aa1.78□□□□□ -2.12
PRPF38A-203ENST00000487160 COX6A2Q02221 97 aa1.78□□□□□ -2.12
PRPF38A-203ENST00000487160 ELOBQ15370 118 aa1.78□□□□□ -2.12
PRPF38A-203ENST00000487160 NDUFA5Q16718 116 aa1.78□□□□□ -2.12
PRPF38A-203ENST00000487160 Q1T7F1 81 aa1.78□□□□□ -2.12
PRPF38A-203ENST00000487160 Q6AWC8 147 aa1.78□□□□□ -2.12
PRPF38A-203ENST00000487160 CLPSL2Q6UWE3 100 aa1.78□□□□□ -2.12
PRPF38A-203ENST00000487160 CIB3Q96Q77 187 aaPredicted RBP1.78□□□□□ -2.12
PRPF38A-203ENST00000487160 OTORQ9NRC9 128 aa1.78□□□□□ -2.12
PRPF38A-203ENST00000487160 COMMD3Q9UBI1 195 aa1.78□□□□□ -2.12
PRPF38A-203ENST00000487160 A0A096LNI7 61 aa1.77□□□□□ -2.13
PRPF38A-203ENST00000487160 TMEM262E9PQX1 116 aa1.77□□□□□ -2.13
PRPF38A-203ENST00000487160 UBE2BP63146 152 aa1.77□□□□□ -2.13
PRPF38A-203ENST00000487160 KRTAP26-1Q6PEX3 210 aa1.77□□□□□ -2.13
PRPF38A-203ENST00000487160 IZUMO2Q6UXV1 221 aa1.77□□□□□ -2.13
PRPF38A-203ENST00000487160 TMEM229BQ8NBD8 167 aa1.77□□□□□ -2.13
PRPF38A-203ENST00000487160 OR2T35Q8NGX2 323 aa1.77□□□□□ -2.13
PRPF38A-203ENST00000487160 MGST2Q99735 147 aa1.77□□□□□ -2.13
PRPF38A-203ENST00000487160 NPVFQ9HCQ7 196 aa1.77□□□□□ -2.13
PRPF38A-203ENST00000487160 FAM24AA6NFZ4 105 aa1.76□□□□□ -2.13
PRPF38A-203ENST00000487160 FAM25AB3EWG3 89 aa1.76□□□□□ -2.13
PRPF38A-203ENST00000487160 FAM25CB3EWG5 89 aa1.76□□□□□ -2.13
PRPF38A-203ENST00000487160 FAM25GB3EWG6 89 aa1.76□□□□□ -2.13
PRPF38A-203ENST00000487160 F6UZH7 168 aa1.76□□□□□ -2.13
PRPF38A-203ENST00000487160 SSSCA1O60232 199 aa1.76□□□□□ -2.13
PRPF38A-203ENST00000487160 SLC25A6P12236 298 aa1.76□□□□□ -2.13
PRPF38A-203ENST00000487160 LSM3P62310 102 aaKnown RBP1.76□□□□□ -2.13
PRPF38A-203ENST00000487160 PDE6HQ13956 83 aa1.76□□□□□ -2.13
PRPF38A-203ENST00000487160 MIC13Q5XKP0 118 aa1.76□□□□□ -2.13
PRPF38A-203ENST00000487160 PHF5AQ7RTV0 110 aaKnown RBP1.76□□□□□ -2.13
PRPF38A-203ENST00000487160 PRR15Q8IV56 129 aa1.76□□□□□ -2.13
PRPF38A-203ENST00000487160 PFDN5Q99471 154 aa1.76□□□□□ -2.13
PRPF38A-203ENST00000487160 PSENENQ9NZ42 101 aa1.76□□□□□ -2.13
PRPF38A-203ENST00000487160 TMEM14CQ9P0S9 112 aa1.76□□□□□ -2.13
PRPF38A-203ENST00000487160 TRBV6-8A0A0A6YYG3 113 aa1.75□□□□□ -2.13
PRPF38A-203ENST00000487160 TRAV1-1A0A0B4J248 108 aa1.75□□□□□ -2.13
PRPF38A-203ENST00000487160 TRAV21A0A0B4J279 112 aa1.75□□□□□ -2.13
PRPF38A-203ENST00000487160 RBAKDNA6NC62 111 aa1.75□□□□□ -2.13
PRPF38A-203ENST00000487160 AKR1C3P42330 323 aa1.75□□□□□ -2.13
PRPF38A-203ENST00000487160 NEDD8Q15843 81 aa1.75□□□□□ -2.13
PRPF38A-203ENST00000487160 HRCT1Q6UXD1 115 aa1.75□□□□□ -2.13
PRPF38A-203ENST00000487160 TMEM14EPQ6UXP3 125 aa1.75□□□□□ -2.13
PRPF38A-203ENST00000487160 LINC00269Q8N2A0 174 aa1.75□□□□□ -2.13
PRPF38A-203ENST00000487160 NPCDR1Q9BY65 106 aa1.75□□□□□ -2.13
PRPF38A-203ENST00000487160 LENEPQ9Y5L5 61 aa1.75□□□□□ -2.13
PRPF38A-203ENST00000487160 PIGBOS1A0A0B4J2F0 54 aa1.74□□□□□ -2.13
PRPF38A-203ENST00000487160 UBE2L5PA0A1B0GUS4 154 aa1.74□□□□□ -2.13
PRPF38A-203ENST00000487160 A8MWV9 139 aa1.74□□□□□ -2.13
PRPF38A-203ENST00000487160 TSTD3H0UI37 97 aa1.74□□□□□ -2.13
PRPF38A-203ENST00000487160 MT-ND6P03923 174 aa1.74□□□□□ -2.13
PRPF38A-203ENST00000487160 AKAIN1P0CW23 69 aa1.74□□□□□ -2.13
PRPF38A-203ENST00000487160 RNASE3P12724 160 aaKnown RBP1.74□□□□□ -2.13
PRPF38A-203ENST00000487160 RAB5CP51148 216 aa1.74□□□□□ -2.13
PRPF38A-203ENST00000487160 UBE2D1P51668 147 aa1.74□□□□□ -2.13
PRPF38A-203ENST00000487160 TMBIM6P55061 237 aa1.74□□□□□ -2.13
PRPF38A-203ENST00000487160 UBE2D3P61077 147 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms