RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 LRCOL1A6NCL2 159 aa7.96□□□□□ -1.13
SEC61A1-205ENST00000483956 FUSP35637 526 aaKnown RBP eCLIP7.96□□□□□ -1.132e-7■□□□□ 9.2
SEC61A1-205ENST00000483956 CXCL6P80162 114 aa7.96□□□□□ -1.13
SEC61A1-205ENST00000483956 LOC100131303A0A0U1RQF7 123 aa7.96□□□□□ -1.14
SEC61A1-205ENST00000483956 CMC4P56277 68 aaPredicted RBP7.96□□□□□ -1.14
SEC61A1-205ENST00000483956 Q6ZTC4 211 aa7.96□□□□□ -1.14
SEC61A1-205ENST00000483956 TRGV2A0A075B6R0 118 aa7.95□□□□□ -1.14
SEC61A1-205ENST00000483956 TRBV6-8A0A0A6YYG3 113 aa7.95□□□□□ -1.14
SEC61A1-205ENST00000483956 LAMTOR3Q9UHA4 124 aa7.95□□□□□ -1.14
SEC61A1-205ENST00000483956 IGLV4-60A0A075B6I1 120 aa7.95□□□□□ -1.14
SEC61A1-205ENST00000483956 PRYO14603 147 aa7.95□□□□□ -1.14
SEC61A1-205ENST00000483956 LOC110117498A0A087WWA1 95 aa7.95□□□□□ -1.14
SEC61A1-205ENST00000483956 BPY2O14599 106 aa7.95□□□□□ -1.14
SEC61A1-205ENST00000483956 J3QKU1 62 aa7.94□□□□□ -1.14
SEC61A1-205ENST00000483956 CCL24O00175 119 aa7.94□□□□□ -1.14
SEC61A1-205ENST00000483956 TEX15Q9BXT5 2789 aa7.94□□□□□ -1.14
SEC61A1-205ENST00000483956 DAD1P61803 113 aa7.93□□□□□ -1.14
SEC61A1-205ENST00000483956 CD164Q04900 197 aa7.93□□□□□ -1.14
SEC61A1-205ENST00000483956 TRGV4A0A0C4DH28 118 aa7.93□□□□□ -1.14
SEC61A1-205ENST00000483956 SPATA3Q8NHX4 192 aa7.92□□□□□ -1.14
SEC61A1-205ENST00000483956 APCP25054 2843 aa7.92□□□□□ -1.14
SEC61A1-205ENST00000483956 C6orf223Q8N319 242 aa7.92□□□□□ -1.14
SEC61A1-205ENST00000483956 CSNK1G2-AS1Q8NCQ2 148 aa7.92□□□□□ -1.14
SEC61A1-205ENST00000483956 ZNF561-AS1K7EIQ3 104 aa7.92□□□□□ -1.14
SEC61A1-205ENST00000483956 C6orf99Q4VX62 202 aa7.91□□□□□ -1.14
SEC61A1-205ENST00000483956 Q6ZRP5 223 aa7.91□□□□□ -1.14
SEC61A1-205ENST00000483956 UBR5O95071 2799 aaPredicted RBP7.91□□□□□ -1.14
SEC61A1-205ENST00000483956 NOTCH3Q9UM47 2321 aa7.91□□□□□ -1.14
SEC61A1-205ENST00000483956 SETXQ7Z333 2677 aaKnown RBP7.91□□□□□ -1.14
SEC61A1-205ENST00000483956 LINC00959A0A1B0GUT2 108 aa7.91□□□□□ -1.14
SEC61A1-205ENST00000483956 Q8N9L7 120 aa7.91□□□□□ -1.14
SEC61A1-205ENST00000483956 ZNF469Q96JG9 3925 aaPredicted RBP7.91□□□□□ -1.14
SEC61A1-205ENST00000483956 ERC2-IT1O76042 136 aa7.9□□□□□ -1.14
SEC61A1-205ENST00000483956 HIGD2AQ9BW72 106 aa7.9□□□□□ -1.14
SEC61A1-205ENST00000483956 PSPHP1O15172 72 aa7.9□□□□□ -1.14
SEC61A1-205ENST00000483956 DEFB113Q30KQ7 82 aa7.9□□□□□ -1.14
SEC61A1-205ENST00000483956 C19orf73Q9NVV2 129 aa7.9□□□□□ -1.14
SEC61A1-205ENST00000483956 Q8IZM0 81 aa7.89□□□□□ -1.15
SEC61A1-205ENST00000483956 C11orf44Q8N8P7 122 aa7.89□□□□□ -1.15
SEC61A1-205ENST00000483956 WNK1Q9H4A3 2382 aa7.89□□□□□ -1.15
SEC61A1-205ENST00000483956 DNAJC9-AS1A6NH13 148 aa7.89□□□□□ -1.15
SEC61A1-205ENST00000483956 LINC00575Q6W349 94 aa7.89□□□□□ -1.15
SEC61A1-205ENST00000483956 ITPR3Q14573 2671 aa7.88□□□□□ -1.15
SEC61A1-205ENST00000483956 hDV103S1A0JD37 113 aa7.88□□□□□ -1.15
SEC61A1-205ENST00000483956 FLNAP21333 2647 aaKnown RBP7.88□□□□□ -1.15
SEC61A1-205ENST00000483956 CD164L2Q6UWJ8 174 aa7.88□□□□□ -1.15
SEC61A1-205ENST00000483956 WFDC10AQ9H1F0 79 aa7.88□□□□□ -1.15
SEC61A1-205ENST00000483956 NF1P21359 2839 aa7.87□□□□□ -1.15
SEC61A1-205ENST00000483956 KRTAP21-3Q3LHN1 58 aa7.87□□□□□ -1.15
SEC61A1-205ENST00000483956 OCR1Q9BZK8 76 aa7.87□□□□□ -1.15
SEC61A1-205ENST00000483956 A0A1B0GUV1 79 aa7.87□□□□□ -1.15
SEC61A1-205ENST00000483956 IGLV1-51P01701 117 aa7.87□□□□□ -1.15
SEC61A1-205ENST00000483956 MUC7Q8TAX7 377 aa7.87□□□□□ -1.15
SEC61A1-205ENST00000483956 JMJD1CQ15652 2540 aa7.87□□□□□ -1.15
SEC61A1-205ENST00000483956 A8MU10 97 aa7.86□□□□□ -1.15
SEC61A1-205ENST00000483956 KRTAP10-9P60411 292 aa7.86□□□□□ -1.15
SEC61A1-205ENST00000483956 Q1T7F1 81 aa7.86□□□□□ -1.15
SEC61A1-205ENST00000483956 C9orf66Q5T8R8 295 aa7.86□□□□□ -1.15
SEC61A1-205ENST00000483956 LINC00612Q8N6U2 182 aa7.85□□□□□ -1.15
SEC61A1-205ENST00000483956 CYSRT1A8MQ03 144 aa7.85□□□□□ -1.15
SEC61A1-205ENST00000483956 KRTAP1-3Q8IUG1 177 aa7.85□□□□□ -1.15
SEC61A1-205ENST00000483956 LINC01006Q8NI28 216 aa7.84□□□□□ -1.15
SEC61A1-205ENST00000483956 COX17Q14061 63 aa7.84□□□□□ -1.15
SEC61A1-205ENST00000483956 Q6ZQY7 126 aa7.84□□□□□ -1.15
SEC61A1-205ENST00000483956 Q8NDZ9 215 aa7.84□□□□□ -1.15
SEC61A1-205ENST00000483956 NIPBLQ6KC79 2804 aaeCLIP7.84□□□□□ -1.155e-6■■■■■ 32.2
SEC61A1-205ENST00000483956 TEP1Q99973 2627 aaKnown RBP7.84□□□□□ -1.15
SEC61A1-205ENST00000483956 C1orf64Q8NEQ6 169 aa7.84□□□□□ -1.16
SEC61A1-205ENST00000483956 ESM1Q9NQ30 184 aa7.84□□□□□ -1.16
SEC61A1-205ENST00000483956 UNC79Q9P2D8 2635 aa7.83□□□□□ -1.16
SEC61A1-205ENST00000483956 PDE6GP18545 87 aa7.83□□□□□ -1.16
SEC61A1-205ENST00000483956 TRAV22A0A0B4J277 110 aa7.83□□□□□ -1.16
SEC61A1-205ENST00000483956 MRPL55Q7Z7F7 128 aaKnown RBP7.83□□□□□ -1.16
SEC61A1-205ENST00000483956 IGKV4-1P06312 121 aa7.82□□□□□ -1.16
SEC61A1-205ENST00000483956 GYPEP15421 78 aa7.82□□□□□ -1.16
SEC61A1-205ENST00000483956 KIAA0087Q14695 138 aa7.81□□□□□ -1.16
SEC61A1-205ENST00000483956 IGHV4-28A0A0C4DH34 117 aa7.81□□□□□ -1.16
SEC61A1-205ENST00000483956 DEFB130BP0DP73 79 aa7.8□□□□□ -1.16
SEC61A1-205ENST00000483956 DEFB130AP0DP74 79 aa7.8□□□□□ -1.16
SEC61A1-205ENST00000483956 RBM12B-AS1Q9P1G2 102 aa7.79□□□□□ -1.16
SEC61A1-205ENST00000483956 C9orf116Q5BN46 136 aaPredicted RBP7.79□□□□□ -1.16
SEC61A1-205ENST00000483956 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.79□□□□□ -1.16
SEC61A1-205ENST00000483956 A8MUN3 132 aa7.78□□□□□ -1.16
SEC61A1-205ENST00000483956 PRO0255Q9UI72 69 aa7.78□□□□□ -1.16
SEC61A1-205ENST00000483956 CELA1Q9UNI1 258 aa7.78□□□□□ -1.16
SEC61A1-205ENST00000483956 CLPSL2Q6UWE3 100 aa7.78□□□□□ -1.16
SEC61A1-205ENST00000483956 FAM30AQ9NZY2 134 aa7.78□□□□□ -1.16
SEC61A1-205ENST00000483956 PRB2P02812 416 aaPredicted RBP7.77□□□□□ -1.17
SEC61A1-205ENST00000483956 SYCNQ0VAF6 134 aa7.77□□□□□ -1.17
SEC61A1-205ENST00000483956 PRR4Q16378 134 aa7.76□□□□□ -1.17
SEC61A1-205ENST00000483956 C10orf25Q5T742 122 aa7.76□□□□□ -1.17
SEC61A1-205ENST00000483956 CHCHD10Q8WYQ3 142 aaPredicted RBP7.76□□□□□ -1.17
SEC61A1-205ENST00000483956 LINC00269Q8N2A0 174 aa7.76□□□□□ -1.17
SEC61A1-205ENST00000483956 X6R8D5 127 aa7.75□□□□□ -1.17
SEC61A1-205ENST00000483956 KTN1-AS1Q86SY8 53 aa7.75□□□□□ -1.17
SEC61A1-205ENST00000483956 LINC00588Q9Y4M8 146 aa7.74□□□□□ -1.17
SEC61A1-205ENST00000483956 SMIM29Q86T20 159 aa7.73□□□□□ -1.17
SEC61A1-205ENST00000483956 REG3AQ06141 175 aa7.73□□□□□ -1.17
SEC61A1-205ENST00000483956 LYRM9A8MSI8 78 aa7.73□□□□□ -1.17
SEC61A1-205ENST00000483956 A0A096LPF7 62 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms