RNA–Protein interactions for RNA: ENST00000483414.1

LIMK1-205, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 3,374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-205ENST00000483414 DEFB131BA0A096LNP1 70 aa6.59□□□□□ -1.35
LIMK1-205ENST00000483414 COX7A2LO14548 114 aa6.59□□□□□ -1.35
LIMK1-205ENST00000483414 TIMM17BO60830 172 aa6.59□□□□□ -1.35
LIMK1-205ENST00000483414 CSDC2Q9Y534 153 aaKnown RBP6.59□□□□□ -1.35
LIMK1-205ENST00000483414 HECTD4Q9Y4D8 3996 aa6.59□□□□□ -1.35
LIMK1-205ENST00000483414 DNAH11Q96DT5 4516 aa6.59□□□□□ -1.35
LIMK1-205ENST00000483414 C9orf129Q5T035 196 aaKnown RBP6.58□□□□□ -1.36
LIMK1-205ENST00000483414 PKD1P98161 4303 aa6.58□□□□□ -1.36
LIMK1-205ENST00000483414 IGLV5-39A0A0G2JS06 123 aa6.58□□□□□ -1.36
LIMK1-205ENST00000483414 FAM19A5Q7Z5A7 132 aaPredicted RBP6.58□□□□□ -1.36
LIMK1-205ENST00000483414 TRBV6-8A0A0A6YYG3 113 aa6.58□□□□□ -1.36
LIMK1-205ENST00000483414 DSCR8Q96T75 97 aa6.58□□□□□ -1.36
LIMK1-205ENST00000483414 FAM218AQ96MZ4 157 aa6.57□□□□□ -1.36
LIMK1-205ENST00000483414 WWC2-AS2Q96NR7 200 aa6.57□□□□□ -1.36
LIMK1-205ENST00000483414 IGLV5-45A0A087WSX0 123 aa6.57□□□□□ -1.36
LIMK1-205ENST00000483414 TRAV13-2A0A0B4J235 113 aa6.57□□□□□ -1.36
LIMK1-205ENST00000483414 SLPIP03973 132 aa6.57□□□□□ -1.36
LIMK1-205ENST00000483414 F5H768 121 aa6.56□□□□□ -1.36
LIMK1-205ENST00000483414 MUC7Q8TAX7 377 aa6.56□□□□□ -1.36
LIMK1-205ENST00000483414 SS18Q15532 418 aa6.55□□□□□ -1.36
LIMK1-205ENST00000483414 MALP21145 153 aa6.55□□□□□ -1.36
LIMK1-205ENST00000483414 PRR3P79522 188 aaKnown RBP6.55□□□□□ -1.36
LIMK1-205ENST00000483414 CASC10Q5T4H9 136 aa6.55□□□□□ -1.36
LIMK1-205ENST00000483414 Q6Q795 121 aa6.55□□□□□ -1.36
LIMK1-205ENST00000483414 NUPR2A6NF83 97 aa6.55□□□□□ -1.36
LIMK1-205ENST00000483414 LECT2O14960 151 aa6.55□□□□□ -1.36
LIMK1-205ENST00000483414 ANGP03950 147 aaKnown RBP6.55□□□□□ -1.36
LIMK1-205ENST00000483414 LINC00337Q8N6G1 96 aa6.55□□□□□ -1.36
LIMK1-205ENST00000483414 CCL18P55774 89 aa6.54□□□□□ -1.36
LIMK1-205ENST00000483414 C3orf22Q8N5N4 141 aa6.54□□□□□ -1.36
LIMK1-205ENST00000483414 SMIM11BQ8TCY0 68 aa6.54□□□□□ -1.36
LIMK1-205ENST00000483414 C14orf132Q9NPU4 83 aa6.54□□□□□ -1.36
LIMK1-205ENST00000483414 LYPD5Q6UWN5 251 aa6.54□□□□□ -1.36
LIMK1-205ENST00000483414 C4orf26Q17RF5 130 aa6.53□□□□□ -1.36
LIMK1-205ENST00000483414 ESRGQ1W209 222 aa6.53□□□□□ -1.36
LIMK1-205ENST00000483414 LINC00269Q8N2A0 174 aa6.53□□□□□ -1.36
LIMK1-205ENST00000483414 LINC00526Q96FQ7 95 aa6.53□□□□□ -1.36
LIMK1-205ENST00000483414 LINC00959A0A1B0GUT2 108 aa6.53□□□□□ -1.36
LIMK1-205ENST00000483414 UPK3BQ9BT76 320 aa6.53□□□□□ -1.36
LIMK1-205ENST00000483414 A0A087WYN8 130 aa6.52□□□□□ -1.37
LIMK1-205ENST00000483414 HRCT1Q6UXD1 115 aa6.52□□□□□ -1.37
LIMK1-205ENST00000483414 OXTP01178 125 aa6.52□□□□□ -1.37
LIMK1-205ENST00000483414 LINC00588Q9Y4M8 146 aa6.52□□□□□ -1.37
LIMK1-205ENST00000483414 Q8N3U1 123 aa6.51□□□□□ -1.37
LIMK1-205ENST00000483414 DNAH5Q8TE73 4624 aa6.51□□□□□ -1.37
LIMK1-205ENST00000483414 IGHV3OR16-9A0A0B4J2B5 98 aa6.51□□□□□ -1.37
LIMK1-205ENST00000483414 TRBV7-7A0A0K0K1E9 115 aa6.51□□□□□ -1.37
LIMK1-205ENST00000483414 A0A1B0GX51 115 aa6.51□□□□□ -1.37
LIMK1-205ENST00000483414 C3orf84H3BNL1 204 aa6.51□□□□□ -1.37
LIMK1-205ENST00000483414 C9orf116Q5BN46 136 aaPredicted RBP6.51□□□□□ -1.37
LIMK1-205ENST00000483414 TRACP01848 142 aa6.51□□□□□ -1.37
LIMK1-205ENST00000483414 IGKV2-28A0A075B6P5 120 aa6.5□□□□□ -1.37
LIMK1-205ENST00000483414 NCR3O14931 201 aa6.5□□□□□ -1.37
LIMK1-205ENST00000483414 IGKV2D-28P01615 120 aa6.5□□□□□ -1.37
LIMK1-205ENST00000483414 HIST1H4AP62805 103 aaKnown RBP6.5□□□□□ -1.37
LIMK1-205ENST00000483414 INAFM2P0DMQ5 153 aa6.5□□□□□ -1.37
LIMK1-205ENST00000483414 C4orf48Q5BLP8 95 aa6.5□□□□□ -1.37
LIMK1-205ENST00000483414 TMEM126AQ9H061 195 aa6.5□□□□□ -1.37
LIMK1-205ENST00000483414 C22orf24Q9Y442 160 aa6.49□□□□□ -1.37
LIMK1-205ENST00000483414 A0A087WZ39 114 aa6.49□□□□□ -1.37
LIMK1-205ENST00000483414 S100A7L2Q5SY68 101 aa6.49□□□□□ -1.37
LIMK1-205ENST00000483414 IBA57-AS1B1ANH7 110 aa6.49□□□□□ -1.37
LIMK1-205ENST00000483414 LELP1Q5T871 98 aa6.49□□□□□ -1.37
LIMK1-205ENST00000483414 UQCRQO14949 82 aa6.48□□□□□ -1.37
LIMK1-205ENST00000483414 RPL28P46779 137 aaKnown RBP6.48□□□□□ -1.37
LIMK1-205ENST00000483414 ACYP1P07311 99 aa6.48□□□□□ -1.37
LIMK1-205ENST00000483414 H0YGX0 51 aa6.47□□□□□ -1.37
LIMK1-205ENST00000483414 WFDC10BQ8IUB3 73 aa6.47□□□□□ -1.37
LIMK1-205ENST00000483414 PKHD1P08F94 4074 aa6.47□□□□□ -1.37
LIMK1-205ENST00000483414 J3KT08 172 aa6.47□□□□□ -1.37
LIMK1-205ENST00000483414 DNAH10OSP0CZ25 163 aa6.47□□□□□ -1.37
LIMK1-205ENST00000483414 LINC00643Q86TS7 51 aa6.47□□□□□ -1.37
LIMK1-205ENST00000483414 CHCHD10Q8WYQ3 142 aaPredicted RBP6.47□□□□□ -1.37
LIMK1-205ENST00000483414 KRTAP1-5Q9BYS1 174 aa6.47□□□□□ -1.37
LIMK1-205ENST00000483414 LINC00846Q9NV44 126 aa6.47□□□□□ -1.37
LIMK1-205ENST00000483414 COX7CP15954 63 aa6.46□□□□□ -1.37
LIMK1-205ENST00000483414 C2orf48Q96LS8 159 aa6.46□□□□□ -1.37
LIMK1-205ENST00000483414 KLK12Q9UKR0 248 aa6.46□□□□□ -1.37
LIMK1-205ENST00000483414 REG3AQ06141 175 aa6.46□□□□□ -1.38
LIMK1-205ENST00000483414 TRAV23DV6A0A075B6W5 121 aa6.45□□□□□ -1.38
LIMK1-205ENST00000483414 A0A1B0GUV1 79 aa6.45□□□□□ -1.38
LIMK1-205ENST00000483414 FAM240AA0A1B0GVK7 77 aa6.45□□□□□ -1.38
LIMK1-205ENST00000483414 C5orf47Q569G3 176 aa6.45□□□□□ -1.38
LIMK1-205ENST00000483414 FAM19A3Q7Z5A8 133 aa6.45□□□□□ -1.38
LIMK1-205ENST00000483414 ORMDL1Q9P0S3 153 aa6.45□□□□□ -1.38
LIMK1-205ENST00000483414 DNAH8Q96JB1 4490 aa6.45□□□□□ -1.38
LIMK1-205ENST00000483414 LINC01556Q5JQF7 62 aa6.44□□□□□ -1.38
LIMK1-205ENST00000483414 C6orf223Q8N319 242 aa6.44□□□□□ -1.38
LIMK1-205ENST00000483414 LINC00476Q8WZB0 136 aa6.44□□□□□ -1.38
LIMK1-205ENST00000483414 PRR34Q9NV39 138 aa6.44□□□□□ -1.38
LIMK1-205ENST00000483414 LAMTOR3Q9UHA4 124 aa6.43□□□□□ -1.38
LIMK1-205ENST00000483414 KRTAP26-1Q6PEX3 210 aa6.43□□□□□ -1.38
LIMK1-205ENST00000483414 UNQ6190/PRO20217Q6UXQ8 127 aa6.43□□□□□ -1.38
LIMK1-205ENST00000483414 Q6ZR54 194 aa6.43□□□□□ -1.38
LIMK1-205ENST00000483414 C6orf99Q4VX62 202 aa6.43□□□□□ -1.38
LIMK1-205ENST00000483414 CXCL5P42830 114 aa6.42□□□□□ -1.38
LIMK1-205ENST00000483414 FAM19A1Q7Z5A9 133 aa6.42□□□□□ -1.38
LIMK1-205ENST00000483414 LINC01561Q8N1V8 128 aa6.42□□□□□ -1.38
LIMK1-205ENST00000483414 RPL18AQ02543 176 aaKnown RBP6.42□□□□□ -1.38
LIMK1-205ENST00000483414 SPAG11BQ08648 103 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms