RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 WFDC2Q14508 124 aa8.15□□□□□ -1.1
TSPAN1-208ENST00000482928 Q6ZRN7 208 aaPredicted RBP8.15□□□□□ -1.1
TSPAN1-208ENST00000482928 DYNC1H1Q14204 4646 aaKnown RBP8.14□□□□□ -1.11
TSPAN1-208ENST00000482928 A0A0B4J2C4 111 aa8.14□□□□□ -1.11
TSPAN1-208ENST00000482928 LOC107984640A0A0U1RRK4 108 aa8.14□□□□□ -1.11
TSPAN1-208ENST00000482928 Q1RN00 199 aa8.14□□□□□ -1.11
TSPAN1-208ENST00000482928 GAGE2EQ4V326 116 aa8.14□□□□□ -1.11
TSPAN1-208ENST00000482928 SOSTDC1Q6X4U4 206 aa8.14□□□□□ -1.11
TSPAN1-208ENST00000482928 KRTAP9-2Q9BYQ4 174 aa8.14□□□□□ -1.11
TSPAN1-208ENST00000482928 GAGE2DQ9UEU5 116 aa8.14□□□□□ -1.11
TSPAN1-208ENST00000482928 LRCOL1A6NCL2 159 aa8.13□□□□□ -1.11
TSPAN1-208ENST00000482928 CFC1BP0CG36 223 aa8.13□□□□□ -1.11
TSPAN1-208ENST00000482928 CFC1P0CG37 223 aa8.13□□□□□ -1.11
TSPAN1-208ENST00000482928 CNBPP62633 177 aaKnown RBP8.13□□□□□ -1.11
TSPAN1-208ENST00000482928 PRO1854Q9UHT4 67 aa8.13□□□□□ -1.11
TSPAN1-208ENST00000482928 A0A087WTM6 91 aa8.12□□□□□ -1.11
TSPAN1-208ENST00000482928 A0A1B0GWB2 263 aa8.12□□□□□ -1.11
TSPAN1-208ENST00000482928 Q8N814 137 aa8.12□□□□□ -1.11
TSPAN1-208ENST00000482928 TRAV13-2A0A0B4J235 113 aa8.11□□□□□ -1.11
TSPAN1-208ENST00000482928 H7C2G1 150 aa8.11□□□□□ -1.11
TSPAN1-208ENST00000482928 SLPIP03973 132 aa8.11□□□□□ -1.11
TSPAN1-208ENST00000482928 TLX1NBP0CAT3 122 aa8.11□□□□□ -1.11
TSPAN1-208ENST00000482928 GAGE2BQ13066 116 aa8.11□□□□□ -1.11
TSPAN1-208ENST00000482928 OR13C6PQ8NH95 151 aa8.11□□□□□ -1.11
TSPAN1-208ENST00000482928 XAGE1AQ9HD64 81 aa8.11□□□□□ -1.11
TSPAN1-208ENST00000482928 PGPEP1Q9NXJ5 209 aa8.11□□□□□ -1.11
TSPAN1-208ENST00000482928 DNAH11Q96DT5 4516 aa8.1□□□□□ -1.11
TSPAN1-208ENST00000482928 LOC107984156A0A0G2JMH3 177 aa8.1□□□□□ -1.11
TSPAN1-208ENST00000482928 A0A1B0GVY2 172 aa8.1□□□□□ -1.11
TSPAN1-208ENST00000482928 TAX1BP3O14907 124 aa8.1□□□□□ -1.11
TSPAN1-208ENST00000482928 EIF4EBP3O60516 100 aaPredicted RBP8.1□□□□□ -1.11
TSPAN1-208ENST00000482928 NDUFC2O95298 119 aa8.1□□□□□ -1.11
TSPAN1-208ENST00000482928 RPL13AP40429 203 aaKnown RBP8.1□□□□□ -1.11
TSPAN1-208ENST00000482928 PSMB2P49721 201 aa8.1□□□□□ -1.11
TSPAN1-208ENST00000482928 ARL17AQ8IVW1 177 aa8.1□□□□□ -1.11
TSPAN1-208ENST00000482928 C9orf118A6NHY6 69 aa8.09□□□□□ -1.11
TSPAN1-208ENST00000482928 Q6ZRP5 223 aa8.09□□□□□ -1.11
TSPAN1-208ENST00000482928 H3BUT2 72 aa8.08□□□□□ -1.12
TSPAN1-208ENST00000482928 NCR3O14931 201 aa8.08□□□□□ -1.12
TSPAN1-208ENST00000482928 S100A7L2Q5SY68 101 aa8.08□□□□□ -1.12
TSPAN1-208ENST00000482928 LYRM7Q5U5X0 104 aa8.08□□□□□ -1.12
TSPAN1-208ENST00000482928 NKAPP1Q8N9T2 125 aa8.08□□□□□ -1.12
TSPAN1-208ENST00000482928 Q8N1X5 172 aa8.07□□□□□ -1.12
TSPAN1-208ENST00000482928 TSPAN13O95857 204 aa8.06□□□□□ -1.12
TSPAN1-208ENST00000482928 SCGB1C2P0DMR2 95 aa8.06□□□□□ -1.12
TSPAN1-208ENST00000482928 FABP2P12104 132 aa8.06□□□□□ -1.12
TSPAN1-208ENST00000482928 LINC00336Q6ZUF6 198 aa8.06□□□□□ -1.12
TSPAN1-208ENST00000482928 C9orf163Q8N9P6 203 aa8.06□□□□□ -1.12
TSPAN1-208ENST00000482928 NAA38Q9BRA0 125 aaKnown RBP8.06□□□□□ -1.12
TSPAN1-208ENST00000482928 IGLV5-52A0A0A0MRZ9 124 aa8.05□□□□□ -1.12
TSPAN1-208ENST00000482928 IGKV2-24A0A0C4DH68 120 aa8.05□□□□□ -1.12
TSPAN1-208ENST00000482928 RTL8CO15255 209 aa8.05□□□□□ -1.12
TSPAN1-208ENST00000482928 COX6CP09669 75 aa8.05□□□□□ -1.12
TSPAN1-208ENST00000482928 VAMP3Q15836 100 aa8.05□□□□□ -1.12
TSPAN1-208ENST00000482928 IGKV2-28A0A075B6P5 120 aa8.04□□□□□ -1.12
TSPAN1-208ENST00000482928 TRBV10-2A0A0K0K1G8 114 aa8.04□□□□□ -1.12
TSPAN1-208ENST00000482928 A0A1B0GV90 55 aa8.04□□□□□ -1.12
TSPAN1-208ENST00000482928 C16orf90A8MZG2 172 aa8.04□□□□□ -1.12
TSPAN1-208ENST00000482928 IGKV2D-28P01615 120 aa8.04□□□□□ -1.12
TSPAN1-208ENST00000482928 PRR3P79522 188 aaKnown RBP8.04□□□□□ -1.12
TSPAN1-208ENST00000482928 TNP2Q05952 138 aa8.04□□□□□ -1.12
TSPAN1-208ENST00000482928 DPH3Q96FX2 82 aa8.04□□□□□ -1.12
TSPAN1-208ENST00000482928 TMEM126AQ9H061 195 aa8.04□□□□□ -1.12
TSPAN1-208ENST00000482928 LINC00474Q9P2X8 69 aa8.04□□□□□ -1.12
TSPAN1-208ENST00000482928 CBY1Q9Y3M2 126 aa8.04□□□□□ -1.12
TSPAN1-208ENST00000482928 A0A1W2PPM0 123 aa8.03□□□□□ -1.12
TSPAN1-208ENST00000482928 M0R378 163 aa8.03□□□□□ -1.12
TSPAN1-208ENST00000482928 C9orf129Q5T035 196 aaKnown RBP8.03□□□□□ -1.12
TSPAN1-208ENST00000482928 LINC00337Q8N6G1 96 aa8.03□□□□□ -1.12
TSPAN1-208ENST00000482928 A0A096LNI7 61 aa8.02□□□□□ -1.13
TSPAN1-208ENST00000482928 VPREB1P12018 145 aa8.02□□□□□ -1.13
TSPAN1-208ENST00000482928 PLA2G2DQ9UNK4 145 aa8.02□□□□□ -1.13
TSPAN1-208ENST00000482928 FAT2Q9NYQ8 4349 aa8.02□□□□□ -1.13
TSPAN1-208ENST00000482928 GTF2H5Q6ZYL4 71 aa8.01□□□□□ -1.13
TSPAN1-208ENST00000482928 FAM19A5Q7Z5A7 132 aaPredicted RBP8.01□□□□□ -1.13
TSPAN1-208ENST00000482928 LINC01620Q4KN68 170 aa8□□□□□ -1.13
TSPAN1-208ENST00000482928 SPCS1Q9Y6A9 102 aa8□□□□□ -1.13
TSPAN1-208ENST00000482928 VPS13DQ5THJ4 4388 aa7.99□□□□□ -1.13
TSPAN1-208ENST00000482928 CDK2AP2O75956 126 aa7.99□□□□□ -1.13
TSPAN1-208ENST00000482928 Q8NDZ9 215 aa7.99□□□□□ -1.13
TSPAN1-208ENST00000482928 DNAH2Q9P225 4427 aa7.99□□□□□ -1.13
TSPAN1-208ENST00000482928 GAGE10A6NGK3 116 aa7.98□□□□□ -1.13
TSPAN1-208ENST00000482928 TRIAP1O43715 76 aa7.98□□□□□ -1.13
TSPAN1-208ENST00000482928 INAFM2P0DMQ5 153 aa7.98□□□□□ -1.13
TSPAN1-208ENST00000482928 SERTAD4-AS1Q5TG53 156 aa7.98□□□□□ -1.13
TSPAN1-208ENST00000482928 SDIM1Q6ZPB5 146 aa7.98□□□□□ -1.13
TSPAN1-208ENST00000482928 SMIM11BQ8TCY0 68 aa7.98□□□□□ -1.13
TSPAN1-208ENST00000482928 HMCN2Q8NDA2 5059 aa7.98□□□□□ -1.13
TSPAN1-208ENST00000482928 RNF213Q63HN8 5207 aa7.97□□□□□ -1.13
TSPAN1-208ENST00000482928 IGLV5-37A0A075B6J1 123 aa7.97□□□□□ -1.13
TSPAN1-208ENST00000482928 TRBV20-1A0A075B6N2 111 aa7.97□□□□□ -1.13
TSPAN1-208ENST00000482928 TRAV23DV6A0A075B6W5 121 aa7.97□□□□□ -1.13
TSPAN1-208ENST00000482928 TRBV10-3A0A0K0K1G6 114 aa7.97□□□□□ -1.13
TSPAN1-208ENST00000482928 FAM168BA1KXE4 195 aa7.97□□□□□ -1.13
TSPAN1-208ENST00000482928 RPL28P46779 137 aaKnown RBP7.97□□□□□ -1.13
TSPAN1-208ENST00000482928 K7EP34 96 aa7.96□□□□□ -1.14
TSPAN1-208ENST00000482928 M0QXV9 152 aa7.96□□□□□ -1.14
TSPAN1-208ENST00000482928 SNCGO76070 127 aa7.96□□□□□ -1.14
TSPAN1-208ENST00000482928 IGLV6-57P01721 117 aa7.96□□□□□ -1.14
TSPAN1-208ENST00000482928 CHTF8P0CG12 524 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms