RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 ALKQ9UM73 1620 aa1.01□□□□□ -2.25
CLCC1-209ENST00000482889 NKTRP30414 1462 aaKnown RBP1.01□□□□□ -2.25
CLCC1-209ENST00000482889 COX8AP10176 69 aa1.01□□□□□ -2.25
CLCC1-209ENST00000482889 S100ZQ8WXG8 99 aa1.01□□□□□ -2.25
CLCC1-209ENST00000482889 FAM103A1Q9BTL3 118 aaKnown RBP1.01□□□□□ -2.25
CLCC1-209ENST00000482889 RGPD2P0DJD1 1756 aa1.01□□□□□ -2.25
CLCC1-209ENST00000482889 RGPD1P0DJD0 1748 aa1.01□□□□□ -2.25
CLCC1-209ENST00000482889 PREX1Q8TCU6 1659 aa1□□□□□ -2.25
CLCC1-209ENST00000482889 USP32Q8NFA0 1604 aa1□□□□□ -2.25
CLCC1-209ENST00000482889 ZNF469Q96JG9 3925 aaPredicted RBP1□□□□□ -2.25
CLCC1-209ENST00000482889 ASXL1Q8IXJ9 1541 aa1□□□□□ -2.25
CLCC1-209ENST00000482889 GOLGB1Q14789 3259 aaKnown RBP1□□□□□ -2.25
CLCC1-209ENST00000482889 I3L2K1 104 aa1□□□□□ -2.25
CLCC1-209ENST00000482889 NDUFB1O75438 58 aa1□□□□□ -2.25
CLCC1-209ENST00000482889 HMGA1P17096 107 aaKnown RBP1□□□□□ -2.25
CLCC1-209ENST00000482889 COX7BP24311 80 aa1□□□□□ -2.25
CLCC1-209ENST00000482889 PRO0255Q9UI72 69 aa1□□□□□ -2.25
CLCC1-209ENST00000482889 PLXNB2O15031 1838 aa1□□□□□ -2.25
CLCC1-209ENST00000482889 RGPD8O14715 1765 aaPredicted RBP1□□□□□ -2.25
CLCC1-209ENST00000482889 RGPD5Q99666 1765 aa1□□□□□ -2.25
CLCC1-209ENST00000482889 CACNA1CQ13936 2221 aa1□□□□□ -2.25
CLCC1-209ENST00000482889 KIAA0556O60303 1618 aa1□□□□□ -2.25
CLCC1-209ENST00000482889 ASH1LQ9NR48 2969 aaKnown RBP0.99□□□□□ -2.25
CLCC1-209ENST00000482889 UNC80Q8N2C7 3258 aa0.99□□□□□ -2.25
CLCC1-209ENST00000482889 ANKRD17O75179 2603 aaKnown RBP0.99□□□□□ -2.25
CLCC1-209ENST00000482889 COX6A2Q02221 97 aa0.99□□□□□ -2.25
CLCC1-209ENST00000482889 ZFHX4Q86UP3 3567 aa0.99□□□□□ -2.25
CLCC1-209ENST00000482889 COL6A3P12111 3177 aa0.99□□□□□ -2.25
CLCC1-209ENST00000482889 TULP4Q9NRJ4 1543 aa0.99□□□□□ -2.25
CLCC1-209ENST00000482889 SPTBN5Q9NRC6 3674 aaKnown RBP0.99□□□□□ -2.25
CLCC1-209ENST00000482889 TRANK1O15050 2925 aa0.99□□□□□ -2.25
CLCC1-209ENST00000482889 ZNF462Q96JM2 2506 aa0.98□□□□□ -2.25
CLCC1-209ENST00000482889 ARFGEF2Q9Y6D5 1785 aa0.98□□□□□ -2.25
CLCC1-209ENST00000482889 EYSQ5T1H1 3165 aa0.98□□□□□ -2.25
CLCC1-209ENST00000482889 CHD6Q8TD26 2715 aa0.98□□□□□ -2.25
CLCC1-209ENST00000482889 MAST4O15021 2626 aa0.98□□□□□ -2.25
CLCC1-209ENST00000482889 A0A087WWC5 75 aa0.98□□□□□ -2.25
CLCC1-209ENST00000482889 ATXN8Q156A1 80 aa0.98□□□□□ -2.25
CLCC1-209ENST00000482889 EFCAB5A4FU69 1503 aa0.98□□□□□ -2.25
CLCC1-209ENST00000482889 CD163L1Q9NR16 1453 aa0.98□□□□□ -2.25
CLCC1-209ENST00000482889 PKD1L3Q7Z443 1732 aa0.98□□□□□ -2.25
CLCC1-209ENST00000482889 DIP2AQ14689 1571 aa0.97□□□□□ -2.25
CLCC1-209ENST00000482889 SPTY2D1-AS1A0A0U1RR47 76 aa0.97□□□□□ -2.25
CLCC1-209ENST00000482889 SFTA3P0C7M3 94 aa0.97□□□□□ -2.25
CLCC1-209ENST00000482889 C3orf79P0CE67 100 aa0.97□□□□□ -2.25
CLCC1-209ENST00000482889 PIGYQ3MUY2 71 aa0.97□□□□□ -2.25
CLCC1-209ENST00000482889 ANKRD36A6QL64 1941 aa0.97□□□□□ -2.25
CLCC1-209ENST00000482889 CDC42BPGQ6DT37 1551 aa0.96□□□□□ -2.26
CLCC1-209ENST00000482889 INO80Q9ULG1 1556 aaPredicted RBP0.96□□□□□ -2.26
CLCC1-209ENST00000482889 A0A0G2JMZ2 1700 aa0.96□□□□□ -2.26
CLCC1-209ENST00000482889 SZT2Q5T011 3432 aa0.96□□□□□ -2.26
CLCC1-209ENST00000482889 ANKRD11Q6UB99 2663 aaPredicted RBP0.96□□□□□ -2.26
CLCC1-209ENST00000482889 HFM1A2PYH4 1435 aa0.96□□□□□ -2.26
CLCC1-209ENST00000482889 FMN2Q9NZ56 1722 aa0.95□□□□□ -2.26
CLCC1-209ENST00000482889 VCANP13611 3396 aa0.95□□□□□ -2.26
CLCC1-209ENST00000482889 NAV3Q8IVL0 2385 aa0.95□□□□□ -2.26
CLCC1-209ENST00000482889 K7EQZ3 153 aa0.95□□□□□ -2.26
CLCC1-209ENST00000482889 ARL14EPLP0DKL9 152 aa0.95□□□□□ -2.26
CLCC1-209ENST00000482889 CNFNQ9BYD5 112 aa0.95□□□□□ -2.26
CLCC1-209ENST00000482889 ZNF292O60281 2723 aa0.95□□□□□ -2.26
CLCC1-209ENST00000482889 PAPPAQ13219 1627 aa0.95□□□□□ -2.26
CLCC1-209ENST00000482889 LMTK2Q8IWU2 1503 aa0.94□□□□□ -2.26
CLCC1-209ENST00000482889 MUC3AQ02505 3323 aa0.94□□□□□ -2.26
CLCC1-209ENST00000482889 PDE4DIPQ5VU43 2346 aa0.94□□□□□ -2.26
CLCC1-209ENST00000482889 LAMA2P24043 3122 aaKnown RBP0.94□□□□□ -2.26
CLCC1-209ENST00000482889 ABCA9Q8IUA7 1624 aa0.94□□□□□ -2.26
CLCC1-209ENST00000482889 RNF17Q9BXT8 1623 aaKnown RBP0.94□□□□□ -2.26
CLCC1-209ENST00000482889 I3L3M4 83 aa0.94□□□□□ -2.26
CLCC1-209ENST00000482889 ENHOQ6UWT2 76 aa0.94□□□□□ -2.26
CLCC1-209ENST00000482889 Q8IZM0 81 aa0.94□□□□□ -2.26
CLCC1-209ENST00000482889 NWD1Q149M9 1564 aa0.94□□□□□ -2.26
CLCC1-209ENST00000482889 ITSN1Q15811 1721 aa0.94□□□□□ -2.26
CLCC1-209ENST00000482889 GOLGA4Q13439 2230 aaKnown RBP0.93□□□□□ -2.26
CLCC1-209ENST00000482889 BIVM-ERCC5R4GMW8 1640 aa0.93□□□□□ -2.26
CLCC1-209ENST00000482889 GLI2P10070 1586 aa0.93□□□□□ -2.26
CLCC1-209ENST00000482889 LCE6AA0A183 80 aa0.93□□□□□ -2.26
CLCC1-209ENST00000482889 CPSF4LA6NMK7 179 aaKnown RBP0.93□□□□□ -2.26
CLCC1-209ENST00000482889 NDUFA4O00483 81 aa0.93□□□□□ -2.26
CLCC1-209ENST00000482889 DEFB123Q8N688 67 aa0.93□□□□□ -2.26
CLCC1-209ENST00000482889 PRUNE2Q8WUY3 3088 aa0.93□□□□□ -2.26
CLCC1-209ENST00000482889 WIZO95785 1651 aa0.93□□□□□ -2.26
CLCC1-209ENST00000482889 KIAA0586Q9BVV6 1533 aa0.93□□□□□ -2.26
CLCC1-209ENST00000482889 ADCY10Q96PN6 1610 aa0.93□□□□□ -2.26
CLCC1-209ENST00000482889 GCN1Q92616 2671 aaKnown RBP0.92□□□□□ -2.26
CLCC1-209ENST00000482889 MKI67P46013 3256 aaKnown RBP0.92□□□□□ -2.26
CLCC1-209ENST00000482889 FAM208BQ5VWN6 2430 aa0.92□□□□□ -2.26
CLCC1-209ENST00000482889 RPL38P63173 70 aaKnown RBP0.92□□□□□ -2.26
CLCC1-209ENST00000482889 PRB3Q04118 309 aaPredicted RBP0.92□□□□□ -2.26
CLCC1-209ENST00000482889 USMG5Q96IX5 58 aa0.92□□□□□ -2.26
CLCC1-209ENST00000482889 BPTFQ12830 3046 aa0.92□□□□□ -2.26
CLCC1-209ENST00000482889 CFAP47Q6ZTR5 3102 aa0.92□□□□□ -2.26
CLCC1-209ENST00000482889 DOT1LQ8TEK3 1739 aa0.92□□□□□ -2.26
CLCC1-209ENST00000482889 CHD8Q9HCK8 2581 aa0.92□□□□□ -2.26
CLCC1-209ENST00000482889 CPS1P31327 1500 aa0.91□□□□□ -2.26
CLCC1-209ENST00000482889 LINC01549A6NIU2 74 aa0.91□□□□□ -2.26
CLCC1-209ENST00000482889 POLR1AO95602 1720 aaPredicted RBP0.91□□□□□ -2.26
CLCC1-209ENST00000482889 TIAM2Q8IVF5 1701 aa0.91□□□□□ -2.26
CLCC1-209ENST00000482889 RALGAPBQ86X10 1494 aa0.91□□□□□ -2.26
CLCC1-209ENST00000482889 MEGF8Q7Z7M0 2845 aa0.91□□□□□ -2.26
CLCC1-209ENST00000482889 CENPFP49454 3210 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms