RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 JMJD7-PLA2G4BH0Y9G9 81 aa8.67□□□□□ -1.02
CCDC78-213ENST00000482878 INAFM1C9JVW0 142 aa8.67□□□□□ -1.02
CCDC78-213ENST00000482878 CLPSL2Q6UWE3 100 aa8.67□□□□□ -1.02
CCDC78-213ENST00000482878 FP248Q71RG6 208 aaPredicted RBP8.67□□□□□ -1.02
CCDC78-213ENST00000482878 OBSCN-AS1Q96MR7 158 aa8.67□□□□□ -1.02
CCDC78-213ENST00000482878 TRBV7-6A0A0J9YX20 115 aa8.66□□□□□ -1.02
CCDC78-213ENST00000482878 IGLV4-60A0A075B6I1 120 aa8.65□□□□□ -1.02
CCDC78-213ENST00000482878 LINC00482Q8N8I6 264 aa8.65□□□□□ -1.02
CCDC78-213ENST00000482878 LYPD5Q6UWN5 251 aa8.65□□□□□ -1.03
CCDC78-213ENST00000482878 TENM1Q9UKZ4 2725 aa8.64□□□□□ -1.03
CCDC78-213ENST00000482878 KRTAP1-3Q8IUG1 177 aa8.64□□□□□ -1.03
CCDC78-213ENST00000482878 TRAV10A0A0B4J240 114 aa8.64□□□□□ -1.03
CCDC78-213ENST00000482878 TRBV6-4A0A1B0GX49 114 aa8.63□□□□□ -1.03
CCDC78-213ENST00000482878 SS18Q15532 418 aa8.63□□□□□ -1.03
CCDC78-213ENST00000482878 C16orf74Q96GX8 76 aa8.63□□□□□ -1.03
CCDC78-213ENST00000482878 LAMTOR3Q9UHA4 124 aa8.63□□□□□ -1.03
CCDC78-213ENST00000482878 IGHV3OR16-9A0A0B4J2B5 98 aa8.62□□□□□ -1.03
CCDC78-213ENST00000482878 SCXQ7RTU7 201 aa8.62□□□□□ -1.03
CCDC78-213ENST00000482878 TMEM256-PLSCR3K7ERE1 68 aa8.61□□□□□ -1.03
CCDC78-213ENST00000482878 NSD1Q96L73 2696 aaPredicted RBP8.61□□□□□ -1.03
CCDC78-213ENST00000482878 TRBV6-8A0A0A6YYG3 113 aa8.61□□□□□ -1.03
CCDC78-213ENST00000482878 CSNK1G2-AS1Q8NCQ2 148 aa8.61□□□□□ -1.03
CCDC78-213ENST00000482878 C16orf95Q9H693 158 aa8.61□□□□□ -1.03
CCDC78-213ENST00000482878 C19orf73Q9NVV2 129 aa8.61□□□□□ -1.03
CCDC78-213ENST00000482878 LY6G6DO95868 133 aa8.6□□□□□ -1.03
CCDC78-213ENST00000482878 C6orf226Q5I0X4 101 aa8.6□□□□□ -1.03
CCDC78-213ENST00000482878 PRR3P79522 188 aaKnown RBP8.6□□□□□ -1.03
CCDC78-213ENST00000482878 KLKP1Q107X0 134 aa8.59□□□□□ -1.03
CCDC78-213ENST00000482878 A0A087WZ39 114 aa8.59□□□□□ -1.04
CCDC78-213ENST00000482878 DEFB135Q30KP9 77 aa8.59□□□□□ -1.04
CCDC78-213ENST00000482878 TRBV10-3A0A0K0K1G6 114 aa8.58□□□□□ -1.04
CCDC78-213ENST00000482878 Q8N814 137 aa8.58□□□□□ -1.04
CCDC78-213ENST00000482878 IBA57-AS1B1ANH7 110 aa8.58□□□□□ -1.04
CCDC78-213ENST00000482878 EPM2AB3EWF7 344 aa8.57□□□□□ -1.04
CCDC78-213ENST00000482878 LINC01547P58512 204 aaPredicted RBP8.57□□□□□ -1.04
CCDC78-213ENST00000482878 IGLV1-51P01701 117 aa8.57□□□□□ -1.04
CCDC78-213ENST00000482878 KMT2BQ9UMN6 2715 aaPredicted RBP8.57□□□□□ -1.04
CCDC78-213ENST00000482878 MIFP14174 115 aa8.56□□□□□ -1.04
CCDC78-213ENST00000482878 Q8N3U1 123 aa8.56□□□□□ -1.04
CCDC78-213ENST00000482878 TM2D3Q9BRN9 247 aa8.56□□□□□ -1.04
CCDC78-213ENST00000482878 LINC00959A0A1B0GUT2 108 aa8.56□□□□□ -1.04
CCDC78-213ENST00000482878 CMC4P56277 68 aaPredicted RBP8.56□□□□□ -1.04
CCDC78-213ENST00000482878 FBN1P35555 2871 aaKnown RBP8.56□□□□□ -1.04
CCDC78-213ENST00000482878 PDZD2O15018 2839 aa8.55□□□□□ -1.04
CCDC78-213ENST00000482878 IGLV10-54A0A075B6I4 117 aa8.55□□□□□ -1.04
CCDC78-213ENST00000482878 Q6ZVQ6 151 aa8.55□□□□□ -1.04
CCDC78-213ENST00000482878 M0R2N4 97 aa8.54□□□□□ -1.04
CCDC78-213ENST00000482878 NDUFC1O43677 76 aa8.53□□□□□ -1.04
CCDC78-213ENST00000482878 C6orf99Q4VX62 202 aa8.53□□□□□ -1.04
CCDC78-213ENST00000482878 DAD1P61803 113 aa8.52□□□□□ -1.05
CCDC78-213ENST00000482878 FAM229BQ4G0N7 80 aa8.52□□□□□ -1.05
CCDC78-213ENST00000482878 GYPEP15421 78 aa8.52□□□□□ -1.05
CCDC78-213ENST00000482878 NREPQ16612 68 aa8.51□□□□□ -1.05
CCDC78-213ENST00000482878 SPATA3Q8NHX4 192 aa8.51□□□□□ -1.05
CCDC78-213ENST00000482878 ATP5EP56381 51 aaPredicted RBP8.51□□□□□ -1.05
CCDC78-213ENST00000482878 BCE1O60756 84 aa8.5□□□□□ -1.05
CCDC78-213ENST00000482878 Q6ZQT0 140 aa8.5□□□□□ -1.05
CCDC78-213ENST00000482878 TMEM254Q8TBM7 123 aa8.5□□□□□ -1.05
CCDC78-213ENST00000482878 LRCOL1A6NCL2 159 aa8.5□□□□□ -1.05
CCDC78-213ENST00000482878 FUSP35637 526 aaKnown RBP eCLIP8.48□□□□□ -1.05
CCDC78-213ENST00000482878 KRTAP1-1Q07627 177 aa8.48□□□□□ -1.05
CCDC78-213ENST00000482878 Q8IZM0 81 aa8.48□□□□□ -1.05
CCDC78-213ENST00000482878 A0A1B0GUV1 79 aa8.48□□□□□ -1.05
CCDC78-213ENST00000482878 NANOS2P60321 138 aaKnown RBP8.48□□□□□ -1.05
CCDC78-213ENST00000482878 LINC00612Q8N6U2 182 aa8.48□□□□□ -1.05
CCDC78-213ENST00000482878 ANK3Q12955 4377 aaKnown RBP8.47□□□□□ -1.05
CCDC78-213ENST00000482878 ZNF561-AS1K7EIQ3 104 aa8.47□□□□□ -1.05
CCDC78-213ENST00000482878 BPY2O14599 106 aa8.46□□□□□ -1.05
CCDC78-213ENST00000482878 PRB2P02812 416 aaPredicted RBP8.46□□□□□ -1.05
CCDC78-213ENST00000482878 LINC00167Q96N53 147 aa8.46□□□□□ -1.05
CCDC78-213ENST00000482878 ESRGQ1W209 222 aa8.46□□□□□ -1.05
CCDC78-213ENST00000482878 Q8N9L7 120 aa8.46□□□□□ -1.06
CCDC78-213ENST00000482878 TRRAPQ9Y4A5 3859 aa8.46□□□□□ -1.06
CCDC78-213ENST00000482878 OXLD1Q5BKU9 147 aa8.45□□□□□ -1.06
CCDC78-213ENST00000482878 Q6ZQY7 126 aa8.45□□□□□ -1.06
CCDC78-213ENST00000482878 X6R8D5 127 aa8.45□□□□□ -1.06
CCDC78-213ENST00000482878 TRBV7-4A0A0J9YYF1 115 aa8.45□□□□□ -1.06
CCDC78-213ENST00000482878 ANGP03950 147 aaKnown RBP8.45□□□□□ -1.06
CCDC78-213ENST00000482878 PMAIP1Q13794 54 aa8.45□□□□□ -1.06
CCDC78-213ENST00000482878 KIAA0087Q14695 138 aa8.45□□□□□ -1.06
CCDC78-213ENST00000482878 LINC00269Q8N2A0 174 aa8.45□□□□□ -1.06
CCDC78-213ENST00000482878 PRO0255Q9UI72 69 aa8.44□□□□□ -1.06
CCDC78-213ENST00000482878 PRYO14603 147 aa8.44□□□□□ -1.06
CCDC78-213ENST00000482878 KRTAP10-3P60369 221 aa8.44□□□□□ -1.06
CCDC78-213ENST00000482878 C9orf116Q5BN46 136 aaPredicted RBP8.44□□□□□ -1.06
CCDC78-213ENST00000482878 BAHCC1Q9P281 2608 aa8.43□□□□□ -1.06
CCDC78-213ENST00000482878 CXCL6P80162 114 aa8.43□□□□□ -1.06
CCDC78-213ENST00000482878 LINC00575Q6W349 94 aa8.43□□□□□ -1.06
CCDC78-213ENST00000482878 Q8NDZ9 215 aa8.42□□□□□ -1.06
CCDC78-213ENST00000482878 CD164L2Q6UWJ8 174 aa8.42□□□□□ -1.06
CCDC78-213ENST00000482878 CHCHD10Q8WYQ3 142 aaPredicted RBP8.41□□□□□ -1.06
CCDC78-213ENST00000482878 LOC110117498A0A087WWA1 95 aa8.41□□□□□ -1.06
CCDC78-213ENST00000482878 PKD1L1Q8TDX9 2849 aa8.41□□□□□ -1.06
CCDC78-213ENST00000482878 MUC7Q8TAX7 377 aa8.4□□□□□ -1.06
CCDC78-213ENST00000482878 HIGD2AQ9BW72 106 aa8.4□□□□□ -1.06
CCDC78-213ENST00000482878 RETNQ9HD89 108 aa8.4□□□□□ -1.06
CCDC78-213ENST00000482878 C6orf223Q8N319 242 aa8.4□□□□□ -1.06
CCDC78-213ENST00000482878 COX17Q14061 63 aa8.39□□□□□ -1.07
CCDC78-213ENST00000482878 PSPHP1O15172 72 aa8.39□□□□□ -1.07
CCDC78-213ENST00000482878 REG3AQ06141 175 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms