RNA–Protein interactions for RNA: ENST00000482745.5

HLA-DQA1-206, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 2,135 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-206ENST00000482745 C6orf223Q8N319 242 aa6.9□□□□□ -1.3
HLA-DQA1-206ENST00000482745 FAM104AQ969W3 186 aa6.9□□□□□ -1.3
HLA-DQA1-206ENST00000482745 UPK3BQ9BT76 320 aa6.89□□□□□ -1.31
HLA-DQA1-206ENST00000482745 KRTAP1-5Q9BYS1 174 aa6.89□□□□□ -1.31
HLA-DQA1-206ENST00000482745 BAALC-AS2P0C853 105 aa6.88□□□□□ -1.31
HLA-DQA1-206ENST00000482745 RPL18AQ02543 176 aaKnown RBP6.88□□□□□ -1.31
HLA-DQA1-206ENST00000482745 LINC00308Q8TCZ7 52 aa6.88□□□□□ -1.31
HLA-DQA1-206ENST00000482745 TIRAPP58753 221 aa6.88□□□□□ -1.31
HLA-DQA1-206ENST00000482745 IGLV5-45A0A087WSX0 123 aa6.87□□□□□ -1.31
HLA-DQA1-206ENST00000482745 hADV29S1A0JD25 119 aa6.87□□□□□ -1.31
HLA-DQA1-206ENST00000482745 GYPEP15421 78 aa6.87□□□□□ -1.31
HLA-DQA1-206ENST00000482745 TNP2Q05952 138 aa6.87□□□□□ -1.31
HLA-DQA1-206ENST00000482745 K7EQD1 137 aa6.86□□□□□ -1.31
HLA-DQA1-206ENST00000482745 SERP2Q8N6R1 65 aa6.86□□□□□ -1.31
HLA-DQA1-206ENST00000482745 UBE2D4Q9Y2X8 147 aa6.86□□□□□ -1.31
HLA-DQA1-206ENST00000482745 LYPD5Q6UWN5 251 aa6.85□□□□□ -1.31
HLA-DQA1-206ENST00000482745 DPH3Q96FX2 82 aa6.85□□□□□ -1.31
HLA-DQA1-206ENST00000482745 C22orf24Q9Y442 160 aa6.85□□□□□ -1.31
HLA-DQA1-206ENST00000482745 IGHV3-73A0A0B4J1V6 119 aa6.85□□□□□ -1.31
HLA-DQA1-206ENST00000482745 LOC100131303A0A0U1RQF7 123 aa6.85□□□□□ -1.31
HLA-DQA1-206ENST00000482745 DNAL4O96015 105 aa6.85□□□□□ -1.31
HLA-DQA1-206ENST00000482745 Q6JHZ5 121 aa6.85□□□□□ -1.31
HLA-DQA1-206ENST00000482745 KIAA1109Q2LD37 5005 aa6.84□□□□□ -1.31
HLA-DQA1-206ENST00000482745 MALP21145 153 aa6.84□□□□□ -1.31
HLA-DQA1-206ENST00000482745 RNASE13Q5GAN3 156 aaKnown RBP6.84□□□□□ -1.31
HLA-DQA1-206ENST00000482745 DNAH11Q96DT5 4516 aa6.84□□□□□ -1.31
HLA-DQA1-206ENST00000482745 IGLV5-39A0A0G2JS06 123 aa6.83□□□□□ -1.32
HLA-DQA1-206ENST00000482745 CHCHD7Q9BUK0 85 aa6.83□□□□□ -1.32
HLA-DQA1-206ENST00000482745 CDKN2A-AS1Q9UH64 79 aa6.83□□□□□ -1.32
HLA-DQA1-206ENST00000482745 RS1O15537 224 aa6.83□□□□□ -1.32
HLA-DQA1-206ENST00000482745 DYNC1H1Q14204 4646 aaKnown RBP6.82□□□□□ -1.32
HLA-DQA1-206ENST00000482745 HERC2O95714 4834 aa6.82□□□□□ -1.32
HLA-DQA1-206ENST00000482745 WFDC10BQ8IUB3 73 aa6.82□□□□□ -1.32
HLA-DQA1-206ENST00000482745 TRAV13-2A0A0B4J235 113 aa6.81□□□□□ -1.32
HLA-DQA1-206ENST00000482745 TRAV13-1A0A0B4J241 112 aa6.81□□□□□ -1.32
HLA-DQA1-206ENST00000482745 C16orf90A8MZG2 172 aa6.81□□□□□ -1.32
HLA-DQA1-206ENST00000482745 RPL28P46779 137 aaKnown RBP6.81□□□□□ -1.32
HLA-DQA1-206ENST00000482745 PIK3CD-AS1Q5SR53 167 aa6.81□□□□□ -1.32
HLA-DQA1-206ENST00000482745 SOSTDC1Q6X4U4 206 aa6.81□□□□□ -1.32
HLA-DQA1-206ENST00000482745 FAM218AQ96MZ4 157 aa6.81□□□□□ -1.32
HLA-DQA1-206ENST00000482745 CYSTM1Q9H1C7 97 aa6.81□□□□□ -1.32
HLA-DQA1-206ENST00000482745 TRBV6-4A0A1B0GX49 114 aa6.8□□□□□ -1.32
HLA-DQA1-206ENST00000482745 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.8□□□□□ -1.32
HLA-DQA1-206ENST00000482745 IGKV2-29A2NJV5 120 aaPredicted RBP6.8□□□□□ -1.32
HLA-DQA1-206ENST00000482745 NDUFC2-KCTD14E9PQ53 114 aa6.8□□□□□ -1.32
HLA-DQA1-206ENST00000482745 FAM19A3Q7Z5A8 133 aa6.8□□□□□ -1.32
HLA-DQA1-206ENST00000482745 OBSCN-AS1Q96MR7 158 aa6.8□□□□□ -1.32
HLA-DQA1-206ENST00000482745 USP17L23D6RBM5 183 aa6.79□□□□□ -1.32
HLA-DQA1-206ENST00000482745 CRPP02741 224 aa6.79□□□□□ -1.32
HLA-DQA1-206ENST00000482745 Q6ZRN7 208 aaPredicted RBP6.79□□□□□ -1.32
HLA-DQA1-206ENST00000482745 ZNF625Q96I27 306 aaPredicted RBP6.79□□□□□ -1.32
HLA-DQA1-206ENST00000482745 SMIM1B2RUZ4 78 aa6.78□□□□□ -1.32
HLA-DQA1-206ENST00000482745 DNAH10OSP0CZ25 163 aa6.78□□□□□ -1.32
HLA-DQA1-206ENST00000482745 DGAT2L7PQ6IED9 249 aa6.78□□□□□ -1.32
HLA-DQA1-206ENST00000482745 Q6ZSN1 163 aa6.78□□□□□ -1.32
HLA-DQA1-206ENST00000482745 DSCR8Q96T75 97 aa6.78□□□□□ -1.32
HLA-DQA1-206ENST00000482745 Q9HAA7 133 aa6.78□□□□□ -1.32
HLA-DQA1-206ENST00000482745 IGKV3D-7A0A0C4DH55 119 aa6.77□□□□□ -1.33
HLA-DQA1-206ENST00000482745 NDUFC2O95298 119 aa6.77□□□□□ -1.33
HLA-DQA1-206ENST00000482745 OXTP01178 125 aa6.77□□□□□ -1.33
HLA-DQA1-206ENST00000482745 Q5XG85 94 aa6.77□□□□□ -1.33
HLA-DQA1-206ENST00000482745 LINC01561Q8N1V8 128 aa6.77□□□□□ -1.33
HLA-DQA1-206ENST00000482745 IGHV3-38A0A0C4DH36 116 aa6.77□□□□□ -1.33
HLA-DQA1-206ENST00000482745 H0YGX0 51 aa6.77□□□□□ -1.33
HLA-DQA1-206ENST00000482745 S100A7L2Q5SY68 101 aa6.77□□□□□ -1.33
HLA-DQA1-206ENST00000482745 LINC00242Q5T6M2 205 aa6.77□□□□□ -1.33
HLA-DQA1-206ENST00000482745 ATP5EP2Q5VTU8 51 aa6.77□□□□□ -1.33
HLA-DQA1-206ENST00000482745 C14orf132Q9NPU4 83 aa6.77□□□□□ -1.33
HLA-DQA1-206ENST00000482745 A0A0U1RRA0 63 aa6.76□□□□□ -1.33
HLA-DQA1-206ENST00000482745 KRTAP10-2P60368 255 aa6.76□□□□□ -1.33
HLA-DQA1-206ENST00000482745 COX6A2Q02221 97 aa6.76□□□□□ -1.33
HLA-DQA1-206ENST00000482745 LINC00846Q9NV44 126 aa6.76□□□□□ -1.33
HLA-DQA1-206ENST00000482745 C4orf26Q17RF5 130 aa6.76□□□□□ -1.33
HLA-DQA1-206ENST00000482745 LELP1Q5T871 98 aa6.76□□□□□ -1.33
HLA-DQA1-206ENST00000482745 Q9UF83 564 aa6.76□□□□□ -1.33
HLA-DQA1-206ENST00000482745 LRP1BQ9NZR2 4599 aa6.75□□□□□ -1.33
HLA-DQA1-206ENST00000482745 A0A087WVE0 104 aa6.74□□□□□ -1.33
HLA-DQA1-206ENST00000482745 LINC01556Q5JQF7 62 aa6.74□□□□□ -1.33
HLA-DQA1-206ENST00000482745 FUSP35637 526 aaKnown RBP eCLIP6.74□□□□□ -1.33
HLA-DQA1-206ENST00000482745 HRCT1Q6UXD1 115 aa6.74□□□□□ -1.33
HLA-DQA1-206ENST00000482745 A0A087WYN8 130 aa6.73□□□□□ -1.33
HLA-DQA1-206ENST00000482745 LINC00337Q8N6G1 96 aa6.73□□□□□ -1.33
HLA-DQA1-206ENST00000482745 RYR1P21817 5038 aa6.73□□□□□ -1.33
HLA-DQA1-206ENST00000482745 PSCAO43653 123 aa6.73□□□□□ -1.33
HLA-DQA1-206ENST00000482745 DNAH5Q8TE73 4624 aa6.72□□□□□ -1.33
HLA-DQA1-206ENST00000482745 A0A087WTM6 91 aa6.72□□□□□ -1.33
HLA-DQA1-206ENST00000482745 IBA57-AS1B1ANH7 110 aa6.72□□□□□ -1.33
HLA-DQA1-206ENST00000482745 C9orf129Q5T035 196 aaKnown RBP6.72□□□□□ -1.33
HLA-DQA1-206ENST00000482745 Q8N3U1 123 aa6.72□□□□□ -1.33
HLA-DQA1-206ENST00000482745 SMIM11BQ8TCY0 68 aa6.72□□□□□ -1.33
HLA-DQA1-206ENST00000482745 SND1-IT1Q9HBX3 110 aa6.72□□□□□ -1.33
HLA-DQA1-206ENST00000482745 HSPG2P98160 4391 aa6.72□□□□□ -1.33
HLA-DQA1-206ENST00000482745 PCLOQ9Y6V0 5065 aa6.72□□□□□ -1.33
HLA-DQA1-206ENST00000482745 IGKV2-28A0A075B6P5 120 aa6.71□□□□□ -1.33
HLA-DQA1-206ENST00000482745 CDK2AP2O75956 126 aa6.71□□□□□ -1.33
HLA-DQA1-206ENST00000482745 IGKV2D-28P01615 120 aa6.71□□□□□ -1.33
HLA-DQA1-206ENST00000482745 CCKP06307 115 aa6.71□□□□□ -1.33
HLA-DQA1-206ENST00000482745 GHRHP01286 108 aa6.71□□□□□ -1.34
HLA-DQA1-206ENST00000482745 RPL36AP83881 106 aaKnown RBP6.71□□□□□ -1.34
HLA-DQA1-206ENST00000482745 RPL36ALQ969Q0 106 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms