RNA–Protein interactions for RNA: ENST00000481038.5

GPCPD1-205, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 2

Gene GPCPD1, Length 6,649 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-205ENST00000481038 CHCHD10Q8WYQ3 142 aaPredicted RBP3.17□□□□□ -1.9
GPCPD1-205ENST00000481038 LINC01600Q96MT4 127 aa3.17□□□□□ -1.9
GPCPD1-205ENST00000481038 TLN1Q9Y490 2541 aaKnown RBP3.17□□□□□ -1.9
GPCPD1-205ENST00000481038 DEFB1P60022 68 aa3.17□□□□□ -1.9
GPCPD1-205ENST00000481038 LINC00242Q5T6M2 205 aa3.17□□□□□ -1.9
GPCPD1-205ENST00000481038 CSAG1Q6PB30 78 aa3.17□□□□□ -1.9
GPCPD1-205ENST00000481038 COX6A2Q02221 97 aa3.17□□□□□ -1.9
GPCPD1-205ENST00000481038 C11orf72Q8NBR9 251 aa3.17□□□□□ -1.9
GPCPD1-205ENST00000481038 MOBPQ13875 183 aa3.16□□□□□ -1.9
GPCPD1-205ENST00000481038 Q8IZM0 81 aa3.16□□□□□ -1.9
GPCPD1-205ENST00000481038 CRIPTQ9P021 101 aa3.16□□□□□ -1.9
GPCPD1-205ENST00000481038 SHANK1Q9Y566 2161 aa3.16□□□□□ -1.9
GPCPD1-205ENST00000481038 A0A096LNI7 61 aa3.16□□□□□ -1.9
GPCPD1-205ENST00000481038 PRLHP81277 87 aa3.16□□□□□ -1.9
GPCPD1-205ENST00000481038 DEFB136Q30KP8 78 aa3.16□□□□□ -1.9
GPCPD1-205ENST00000481038 LINC00476Q8WZB0 136 aa3.16□□□□□ -1.9
GPCPD1-205ENST00000481038 NAV2Q8IVL1 2488 aa3.16□□□□□ -1.9
GPCPD1-205ENST00000481038 NAV3Q8IVL0 2385 aa3.16□□□□□ -1.9
GPCPD1-205ENST00000481038 KPRPQ5T749 579 aaPredicted RBP3.16□□□□□ -1.9
GPCPD1-205ENST00000481038 KLK9Q2XQG4 91 aa3.15□□□□□ -1.9
GPCPD1-205ENST00000481038 Q5VV11 94 aa3.15□□□□□ -1.9
GPCPD1-205ENST00000481038 PRO0255Q9UI72 69 aa3.15□□□□□ -1.9
GPCPD1-205ENST00000481038 MKI67P46013 3256 aaKnown RBP3.15□□□□□ -1.9
GPCPD1-205ENST00000481038 COL27A1Q8IZC6 1860 aaPredicted RBP3.15□□□□□ -1.9
GPCPD1-205ENST00000481038 ARFGEF3Q5TH69 2177 aa3.15□□□□□ -1.91
GPCPD1-205ENST00000481038 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.15□□□□□ -1.91
GPCPD1-205ENST00000481038 TRBV7-4A0A0J9YYF1 115 aa3.15□□□□□ -1.91
GPCPD1-205ENST00000481038 SPANXA2-OT1Q8N9U9 137 aa3.15□□□□□ -1.91
GPCPD1-205ENST00000481038 IGKV2-28A0A075B6P5 120 aa3.14□□□□□ -1.91
GPCPD1-205ENST00000481038 IGKV2D-28P01615 120 aa3.14□□□□□ -1.91
GPCPD1-205ENST00000481038 PROK1P58294 105 aa3.14□□□□□ -1.91
GPCPD1-205ENST00000481038 C14orf177Q52M58 125 aa3.14□□□□□ -1.91
GPCPD1-205ENST00000481038 AGRNO00468 2067 aa3.14□□□□□ -1.91
GPCPD1-205ENST00000481038 MUC3AQ02505 3323 aa3.14□□□□□ -1.91
GPCPD1-205ENST00000481038 NDUFAF8A1L188 74 aa3.14□□□□□ -1.91
GPCPD1-205ENST00000481038 CDC42SE2Q9NRR3 84 aa3.14□□□□□ -1.91
GPCPD1-205ENST00000481038 RPL37AP8A6NKH3 93 aa3.14□□□□□ -1.91
GPCPD1-205ENST00000481038 IGLV1-51P01701 117 aa3.14□□□□□ -1.91
GPCPD1-205ENST00000481038 C1orf229Q6ZS94 237 aaPredicted RBP3.14□□□□□ -1.91
GPCPD1-205ENST00000481038 ATRXP46100 2492 aa3.13□□□□□ -1.91
GPCPD1-205ENST00000481038 A0A087WSZ3 146 aa3.13□□□□□ -1.91
GPCPD1-205ENST00000481038 LINC00959A0A1B0GUT2 108 aa3.13□□□□□ -1.91
GPCPD1-205ENST00000481038 PRR9Q5T870 116 aa3.13□□□□□ -1.91
GPCPD1-205ENST00000481038 LAMA2P24043 3122 aaKnown RBP3.13□□□□□ -1.91
GPCPD1-205ENST00000481038 CYSRT1A8MQ03 144 aa3.13□□□□□ -1.91
GPCPD1-205ENST00000481038 RAI1Q7Z5J4 1906 aaPredicted RBP3.13□□□□□ -1.91
GPCPD1-205ENST00000481038 HIVEP3Q5T1R4 2406 aa3.12□□□□□ -1.91
GPCPD1-205ENST00000481038 ANKRD11Q6UB99 2663 aaPredicted RBP3.12□□□□□ -1.91
GPCPD1-205ENST00000481038 DOPEY2Q9Y3R5 2298 aa3.12□□□□□ -1.91
GPCPD1-205ENST00000481038 SPINK6Q6UWN8 80 aa3.12□□□□□ -1.91
GPCPD1-205ENST00000481038 A8MTW9 85 aa3.12□□□□□ -1.91
GPCPD1-205ENST00000481038 LITAFQ99732 161 aa3.12□□□□□ -1.91
GPCPD1-205ENST00000481038 DOPEY1Q5JWR5 2465 aa3.12□□□□□ -1.91
GPCPD1-205ENST00000481038 KLLNB2CW77 178 aa3.11□□□□□ -1.91
GPCPD1-205ENST00000481038 ABCA1O95477 2261 aa3.11□□□□□ -1.91
GPCPD1-205ENST00000481038 SPG11Q96JI7 2443 aa3.11□□□□□ -1.91
GPCPD1-205ENST00000481038 Q8N9P0 234 aaPredicted RBP3.11□□□□□ -1.91
GPCPD1-205ENST00000481038 NUPR2A6NF83 97 aa3.11□□□□□ -1.91
GPCPD1-205ENST00000481038 IGLV4-60A0A075B6I1 120 aa3.1□□□□□ -1.91
GPCPD1-205ENST00000481038 DEFB135Q30KP9 77 aa3.1□□□□□ -1.91
GPCPD1-205ENST00000481038 WDR87Q6ZQQ6 2873 aa3.1□□□□□ -1.91
GPCPD1-205ENST00000481038 A0A096LNT2 108 aa3.1□□□□□ -1.91
GPCPD1-205ENST00000481038 COL6A3P12111 3177 aa3.1□□□□□ -1.91
GPCPD1-205ENST00000481038 SZT2Q5T011 3432 aa3.1□□□□□ -1.91
GPCPD1-205ENST00000481038 PLA2G1BP04054 148 aaKnown RBP3.1□□□□□ -1.91
GPCPD1-205ENST00000481038 LINC01558Q9Y6Z2 57 aa3.1□□□□□ -1.91
GPCPD1-205ENST00000481038 A6NN06 94 aa3.09□□□□□ -1.91
GPCPD1-205ENST00000481038 TLX1NBP0CAT3 122 aa3.09□□□□□ -1.91
GPCPD1-205ENST00000481038 CEP295Q9C0D2 2601 aa3.09□□□□□ -1.91
GPCPD1-205ENST00000481038 SPTBN4Q9H254 2564 aa3.09□□□□□ -1.91
GPCPD1-205ENST00000481038 MED13LQ71F56 2210 aa3.09□□□□□ -1.91
GPCPD1-205ENST00000481038 NOTCH2Q04721 2471 aa3.09□□□□□ -1.92
GPCPD1-205ENST00000481038 PKD1L2Q7Z442 2459 aa3.09□□□□□ -1.92
GPCPD1-205ENST00000481038 EPM2AB3EWF7 344 aa3.09□□□□□ -1.92
GPCPD1-205ENST00000481038 K7EQZ3 153 aa3.09□□□□□ -1.92
GPCPD1-205ENST00000481038 TNCP24821 2201 aa3.09□□□□□ -1.92
GPCPD1-205ENST00000481038 PRRC2AP48634 2157 aaKnown RBP3.09□□□□□ -1.92
GPCPD1-205ENST00000481038 LAMA3Q16787 3333 aa3.09□□□□□ -1.92
GPCPD1-205ENST00000481038 PTPN13Q12923 2485 aa3.08□□□□□ -1.92
GPCPD1-205ENST00000481038 CSNK1G2-AS1Q8NCQ2 148 aa3.08□□□□□ -1.92
GPCPD1-205ENST00000481038 A8MWP4 228 aa3.08□□□□□ -1.92
GPCPD1-205ENST00000481038 PRR14LQ5THK1 2151 aa3.08□□□□□ -1.92
GPCPD1-205ENST00000481038 DEFB131BA0A096LNP1 70 aa3.08□□□□□ -1.92
GPCPD1-205ENST00000481038 Q8NBF4 154 aa3.08□□□□□ -1.92
GPCPD1-205ENST00000481038 SMR3AQ99954 134 aa3.08□□□□□ -1.92
GPCPD1-205ENST00000481038 C22orf24Q9Y442 160 aa3.08□□□□□ -1.92
GPCPD1-205ENST00000481038 UNQ6190/PRO20217Q6UXQ8 127 aa3.07□□□□□ -1.92
GPCPD1-205ENST00000481038 BRCA2P51587 3418 aa3.07□□□□□ -1.92
GPCPD1-205ENST00000481038 Q8NAQ8 132 aa3.07□□□□□ -1.92
GPCPD1-205ENST00000481038 ZNF462Q96JM2 2506 aa3.07□□□□□ -1.92
GPCPD1-205ENST00000481038 SORL1Q92673 2214 aa3.07□□□□□ -1.92
GPCPD1-205ENST00000481038 IGLV5-52A0A0A0MRZ9 124 aa3.07□□□□□ -1.92
GPCPD1-205ENST00000481038 ODF3L2Q3SX64 289 aa3.07□□□□□ -1.92
GPCPD1-205ENST00000481038 ST20-AS1Q8NBB2 130 aa3.07□□□□□ -1.92
GPCPD1-205ENST00000481038 C10orf99Q6UWK7 81 aa3.06□□□□□ -1.92
GPCPD1-205ENST00000481038 OBSCN-AS1Q96MR7 158 aa3.06□□□□□ -1.92
GPCPD1-205ENST00000481038 IGKV2-24A0A0C4DH68 120 aa3.06□□□□□ -1.92
GPCPD1-205ENST00000481038 CSPG4Q6UVK1 2322 aa3.06□□□□□ -1.92
GPCPD1-205ENST00000481038 LELP1Q5T871 98 aa3.06□□□□□ -1.92
GPCPD1-205ENST00000481038 SPINK7P58062 85 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms