RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 C10orf25Q5T742 122 aa7.15□□□□□ -1.26
SIK3-210ENST00000480468 UNQ6190/PRO20217Q6UXQ8 127 aa7.15□□□□□ -1.26
SIK3-210ENST00000480468 Q8N9L7 120 aa7.15□□□□□ -1.26
SIK3-210ENST00000480468 REG3AQ06141 175 aa7.15□□□□□ -1.27
SIK3-210ENST00000480468 SPAG11BQ08648 103 aa7.15□□□□□ -1.27
SIK3-210ENST00000480468 SPG11Q96JI7 2443 aa7.14□□□□□ -1.27
SIK3-210ENST00000480468 C19orf73Q9NVV2 129 aa7.13□□□□□ -1.27
SIK3-210ENST00000480468 PRO0255Q9UI72 69 aa7.13□□□□□ -1.27
SIK3-210ENST00000480468 MYO9AB2RTY4 2548 aa7.13□□□□□ -1.27
SIK3-210ENST00000480468 A0A1B0GW54 56 aa7.13□□□□□ -1.27
SIK3-210ENST00000480468 CYSRT1A8MQ03 144 aa7.13□□□□□ -1.27
SIK3-210ENST00000480468 Q6ZRP5 223 aa7.13□□□□□ -1.27
SIK3-210ENST00000480468 IGF2RP11717 2491 aa7.13□□□□□ -1.27
SIK3-210ENST00000480468 IGLV10-54A0A075B6I4 117 aa7.12□□□□□ -1.27
SIK3-210ENST00000480468 ANGP03950 147 aaKnown RBP7.12□□□□□ -1.27
SIK3-210ENST00000480468 DEFB130BP0DP73 79 aa7.12□□□□□ -1.27
SIK3-210ENST00000480468 DEFB130AP0DP74 79 aa7.12□□□□□ -1.27
SIK3-210ENST00000480468 HIGD2BQ4VC39 106 aa7.12□□□□□ -1.27
SIK3-210ENST00000480468 ZCCHC13Q8WW36 166 aaKnown RBP7.12□□□□□ -1.27
SIK3-210ENST00000480468 CELSR2Q9HCU4 2923 aa7.12□□□□□ -1.27
SIK3-210ENST00000480468 MXRA5Q9NR99 2828 aa7.11□□□□□ -1.27
SIK3-210ENST00000480468 TLN2Q9Y4G6 2542 aa7.11□□□□□ -1.27
SIK3-210ENST00000480468 LINC00528Q8N1L1 170 aa7.11□□□□□ -1.27
SIK3-210ENST00000480468 C1orf64Q8NEQ6 169 aa7.11□□□□□ -1.27
SIK3-210ENST00000480468 CHD6Q8TD26 2715 aa7.11□□□□□ -1.27
SIK3-210ENST00000480468 CYP4F30PQ9H0H9 118 aa7.1□□□□□ -1.27
SIK3-210ENST00000480468 WFDC10AQ9H1F0 79 aa7.1□□□□□ -1.27
SIK3-210ENST00000480468 CR1P17927 2039 aa7.1□□□□□ -1.27
SIK3-210ENST00000480468 DAD1P61803 113 aa7.09□□□□□ -1.27
SIK3-210ENST00000480468 SETXQ7Z333 2677 aaKnown RBP7.08□□□□□ -1.28
SIK3-210ENST00000480468 JMJD1CQ15652 2540 aa7.08□□□□□ -1.28
SIK3-210ENST00000480468 SMIM29Q86T20 159 aa7.08□□□□□ -1.28
SIK3-210ENST00000480468 M0R378 163 aa7.08□□□□□ -1.28
SIK3-210ENST00000480468 IGLV1-51P01701 117 aa7.08□□□□□ -1.28
SIK3-210ENST00000480468 VPREB1P12018 145 aa7.08□□□□□ -1.28
SIK3-210ENST00000480468 C6orf48Q9UBA6 75 aa7.08□□□□□ -1.28
SIK3-210ENST00000480468 USP9YO00507 2555 aaPredicted RBP7.07□□□□□ -1.28
SIK3-210ENST00000480468 NBPF19A0A087WUL8 3843 aa7.07□□□□□ -1.28
SIK3-210ENST00000480468 IGLV5-48A0A075B6I7 105 aa7.07□□□□□ -1.28
SIK3-210ENST00000480468 A0A096LPF7 62 aa7.07□□□□□ -1.28
SIK3-210ENST00000480468 TRAV22A0A0B4J277 110 aa7.07□□□□□ -1.28
SIK3-210ENST00000480468 FAM30AQ9NZY2 134 aa7.07□□□□□ -1.28
SIK3-210ENST00000480468 KLK12Q9UKR0 248 aa7.07□□□□□ -1.28
SIK3-210ENST00000480468 MUC6Q6W4X9 2439 aa7.07□□□□□ -1.28
SIK3-210ENST00000480468 XAGE1AQ9HD64 81 aa7.06□□□□□ -1.28
SIK3-210ENST00000480468 ZANQ9Y493 2812 aa7.06□□□□□ -1.28
SIK3-210ENST00000480468 ETDCA0A1B0GVM5 59 aa7.05□□□□□ -1.28
SIK3-210ENST00000480468 CD164Q04900 197 aa7.05□□□□□ -1.28
SIK3-210ENST00000480468 PRR34Q9NV39 138 aa7.05□□□□□ -1.28
SIK3-210ENST00000480468 C3orf84H3BNL1 204 aa7.05□□□□□ -1.28
SIK3-210ENST00000480468 MAPK1IP1LQ8NDC0 245 aa7.05□□□□□ -1.28
SIK3-210ENST00000480468 PRB1P04280 392 aa7.04□□□□□ -1.28
SIK3-210ENST00000480468 LYRM9A8MSI8 78 aa7.03□□□□□ -1.28
SIK3-210ENST00000480468 PSCAO43653 123 aa7.03□□□□□ -1.28
SIK3-210ENST00000480468 KPRPQ5T749 579 aaPredicted RBP7.03□□□□□ -1.28
SIK3-210ENST00000480468 AKAP9Q99996 3911 aa7.03□□□□□ -1.28
SIK3-210ENST00000480468 LRCOL1A6NCL2 159 aa7.03□□□□□ -1.28
SIK3-210ENST00000480468 NDUFB1O75438 58 aa7.03□□□□□ -1.28
SIK3-210ENST00000480468 X6R8D5 127 aa7.03□□□□□ -1.28
SIK3-210ENST00000480468 USP9XQ93008 2570 aaPredicted RBP7.03□□□□□ -1.28
SIK3-210ENST00000480468 ITPR1Q14643 2758 aa7.02□□□□□ -1.29
SIK3-210ENST00000480468 PSPHP1O15172 72 aa7.02□□□□□ -1.29
SIK3-210ENST00000480468 EGFEM1PQ0D2K5 195 aa7.01□□□□□ -1.29
SIK3-210ENST00000480468 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.01□□□□□ -1.29
SIK3-210ENST00000480468 LELP1Q5T871 98 aa7.01□□□□□ -1.29
SIK3-210ENST00000480468 DOPEY1Q5JWR5 2465 aa7.01□□□□□ -1.29
SIK3-210ENST00000480468 CSMD2Q7Z408 3487 aa7□□□□□ -1.29
SIK3-210ENST00000480468 Q8N377 158 aa7□□□□□ -1.29
SIK3-210ENST00000480468 ANKRD17O75179 2603 aaKnown RBP6.99□□□□□ -1.29
SIK3-210ENST00000480468 A0A1W2PNM2 257 aa6.99□□□□□ -1.29
SIK3-210ENST00000480468 UBE2BP63146 152 aa6.99□□□□□ -1.29
SIK3-210ENST00000480468 SYCNQ0VAF6 134 aa6.99□□□□□ -1.29
SIK3-210ENST00000480468 DSCR10P59022 87 aa6.98□□□□□ -1.29
SIK3-210ENST00000480468 Q8NBF4 154 aa6.98□□□□□ -1.29
SIK3-210ENST00000480468 SPRR4Q96PI1 79 aa6.98□□□□□ -1.29
SIK3-210ENST00000480468 KCNQ1DNQ9H478 68 aa6.98□□□□□ -1.29
SIK3-210ENST00000480468 A8MUN3 132 aa6.97□□□□□ -1.29
SIK3-210ENST00000480468 TNP2Q05952 138 aa6.97□□□□□ -1.29
SIK3-210ENST00000480468 CAMK2N2Q96S95 79 aa6.97□□□□□ -1.29
SIK3-210ENST00000480468 Q5VV11 94 aa6.97□□□□□ -1.29
SIK3-210ENST00000480468 EPG5Q9HCE0 2579 aa6.97□□□□□ -1.29
SIK3-210ENST00000480468 APCP25054 2843 aa6.96□□□□□ -1.3
SIK3-210ENST00000480468 FN1P02751 2386 aaKnown RBP6.96□□□□□ -1.3
SIK3-210ENST00000480468 NIPBLQ6KC79 2804 aaeCLIP6.96□□□□□ -1.3
SIK3-210ENST00000480468 DNAJC9-AS1A6NH13 148 aa6.96□□□□□ -1.3
SIK3-210ENST00000480468 UBE2AP49459 152 aa6.96□□□□□ -1.3
SIK3-210ENST00000480468 HCG22E2RYF7 251 aa6.95□□□□□ -1.3
SIK3-210ENST00000480468 C1orf137Q5JT78 98 aa6.95□□□□□ -1.3
SIK3-210ENST00000480468 ST20-AS1Q8NBB2 130 aa6.95□□□□□ -1.3
SIK3-210ENST00000480468 DHRS4-AS1Q9P1J3 65 aa6.95□□□□□ -1.3
SIK3-210ENST00000480468 UTP20O75691 2785 aaKnown RBP6.95□□□□□ -1.3
SIK3-210ENST00000480468 SPANXA2-OT1Q8N9U9 137 aa6.95□□□□□ -1.3
SIK3-210ENST00000480468 LIMD2Q9BT23 127 aa6.95□□□□□ -1.3
SIK3-210ENST00000480468 FBN2P35556 2912 aa6.94□□□□□ -1.3
SIK3-210ENST00000480468 PTPN13Q12923 2485 aa6.94□□□□□ -1.3
SIK3-210ENST00000480468 K7EQZ3 153 aa6.94□□□□□ -1.3
SIK3-210ENST00000480468 B9D2Q9BPU9 175 aa6.94□□□□□ -1.3
SIK3-210ENST00000480468 NCOR2Q9Y618 2525 aa6.94□□□□□ -1.3
SIK3-210ENST00000480468 KTN1-AS1Q86SY8 53 aa6.93□□□□□ -1.3
SIK3-210ENST00000480468 DEFB105AQ8NG35 78 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 183.1 ms