RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 SMIM29Q86T20 159 aa14.32□□□□□ -0.12
SDF4-206ENST00000478938 PRR4Q16378 134 aa14.31□□□□□ -0.12
SDF4-206ENST00000478938 A8MUN3 132 aa14.31□□□□□ -0.12
SDF4-206ENST00000478938 JMJD1CQ15652 2540 aa14.31□□□□□ -0.12
SDF4-206ENST00000478938 CHD6Q8TD26 2715 aa14.31□□□□□ -0.12
SDF4-206ENST00000478938 DEFB114Q30KQ6 69 aa14.3□□□□□ -0.12
SDF4-206ENST00000478938 KLK12Q9UKR0 248 aa14.3□□□□□ -0.12
SDF4-206ENST00000478938 IGLV10-54A0A075B6I4 117 aa14.29□□□□□ -0.12
SDF4-206ENST00000478938 H3BQ85 93 aa14.29□□□□□ -0.12
SDF4-206ENST00000478938 ACACBO00763 2458 aa14.29□□□□□ -0.12
SDF4-206ENST00000478938 C3orf84H3BNL1 204 aa14.29□□□□□ -0.12
SDF4-206ENST00000478938 HIVEP3Q5T1R4 2406 aa14.28□□□□□ -0.12
SDF4-206ENST00000478938 DIRC1Q969H9 104 aa14.28□□□□□ -0.12
SDF4-206ENST00000478938 IGHV4-28A0A0C4DH34 117 aa14.27□□□□□ -0.13
SDF4-206ENST00000478938 MRPL55Q7Z7F7 128 aaKnown RBP14.27□□□□□ -0.13
SDF4-206ENST00000478938 SYCNQ0VAF6 134 aa14.26□□□□□ -0.13
SDF4-206ENST00000478938 MSMBP08118 114 aa14.25□□□□□ -0.13
SDF4-206ENST00000478938 UNQ6190/PRO20217Q6UXQ8 127 aa14.25□□□□□ -0.13
SDF4-206ENST00000478938 TLN2Q9Y4G6 2542 aa14.24□□□□□ -0.13
SDF4-206ENST00000478938 PKD1L2Q7Z442 2459 aa14.23□□□□□ -0.13
SDF4-206ENST00000478938 A0A096LPF7 62 aa14.22□□□□□ -0.13
SDF4-206ENST00000478938 PSCAO43653 123 aa14.22□□□□□ -0.13
SDF4-206ENST00000478938 IGHV4-30-2A0A087WSY4 118 aa14.22□□□□□ -0.13
SDF4-206ENST00000478938 LCE6AA0A183 80 aa14.22□□□□□ -0.13
SDF4-206ENST00000478938 CHCHD10Q8WYQ3 142 aaPredicted RBP14.22□□□□□ -0.13
SDF4-206ENST00000478938 ZNF702PQ9H963 129 aa14.22□□□□□ -0.13
SDF4-206ENST00000478938 RBM12B-AS1Q9P1G2 102 aa14.22□□□□□ -0.13
SDF4-206ENST00000478938 USP24Q9UPU5 2620 aa14.21□□□□□ -0.13
SDF4-206ENST00000478938 ZNF73O43830 326 aaPredicted RBP14.21□□□□□ -0.14
SDF4-206ENST00000478938 C16orf74Q96GX8 76 aa14.21□□□□□ -0.14
SDF4-206ENST00000478938 GIG44P09565 113 aaPredicted RBP14.2□□□□□ -0.14
SDF4-206ENST00000478938 ZCCHC13Q8WW36 166 aaKnown RBP14.2□□□□□ -0.14
SDF4-206ENST00000478938 MYO9AB2RTY4 2548 aa14.19□□□□□ -0.14
SDF4-206ENST00000478938 NIPBLQ6KC79 2804 aaeCLIP14.19□□□□□ -0.145e-6■□□□□ 10
SDF4-206ENST00000478938 A0A1B0GUV1 79 aa14.19□□□□□ -0.14
SDF4-206ENST00000478938 Q5VV11 94 aa14.18□□□□□ -0.14
SDF4-206ENST00000478938 ZANQ9Y493 2812 aa14.18□□□□□ -0.14
SDF4-206ENST00000478938 HIGD2BQ4VC39 106 aa14.18□□□□□ -0.14
SDF4-206ENST00000478938 SETXQ7Z333 2677 aaKnown RBP14.17□□□□□ -0.14
SDF4-206ENST00000478938 CCL24O00175 119 aa14.17□□□□□ -0.14
SDF4-206ENST00000478938 IGHV4-30-4P0DP06 118 aa14.17□□□□□ -0.14
SDF4-206ENST00000478938 ELOF1P60002 83 aaKnown RBP14.17□□□□□ -0.14
SDF4-206ENST00000478938 XAGE1AQ9HD64 81 aa14.17□□□□□ -0.14
SDF4-206ENST00000478938 MXRA5Q9NR99 2828 aa14.17□□□□□ -0.14
SDF4-206ENST00000478938 GYPEP15421 78 aa14.17□□□□□ -0.14
SDF4-206ENST00000478938 KTN1-AS1Q86SY8 53 aa14.17□□□□□ -0.14
SDF4-206ENST00000478938 LINC00588Q9Y4M8 146 aa14.16□□□□□ -0.14
SDF4-206ENST00000478938 UBE2BP63146 152 aa14.15□□□□□ -0.14
SDF4-206ENST00000478938 WFDC10AQ9H1F0 79 aa14.15□□□□□ -0.14
SDF4-206ENST00000478938 APCP25054 2843 aa14.14□□□□□ -0.15
SDF4-206ENST00000478938 UTP20O75691 2785 aaKnown RBP14.14□□□□□ -0.15
SDF4-206ENST00000478938 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.14□□□□□ -0.15
SDF4-206ENST00000478938 DEFB130BP0DP73 79 aa14.14□□□□□ -0.15
SDF4-206ENST00000478938 DEFB130AP0DP74 79 aa14.14□□□□□ -0.15
SDF4-206ENST00000478938 SPAG11BQ08648 103 aa14.13□□□□□ -0.15
SDF4-206ENST00000478938 B4DSR2 109 aa14.13□□□□□ -0.15
SDF4-206ENST00000478938 ST20-AS1Q8NBB2 130 aa14.12□□□□□ -0.15
SDF4-206ENST00000478938 CYP4F30PQ9H0H9 118 aa14.12□□□□□ -0.15
SDF4-206ENST00000478938 CYSRT1A8MQ03 144 aa14.12□□□□□ -0.15
SDF4-206ENST00000478938 C16orf90A8MZG2 172 aa14.11□□□□□ -0.15
SDF4-206ENST00000478938 SPTSSBQ8NFR3 76 aa14.11□□□□□ -0.15
SDF4-206ENST00000478938 CFAP46Q8IYW2 2715 aa14.11□□□□□ -0.15
SDF4-206ENST00000478938 ANGP03950 147 aaKnown RBP14.11□□□□□ -0.15
SDF4-206ENST00000478938 FN1P02751 2386 aaKnown RBP14.1□□□□□ -0.15
SDF4-206ENST00000478938 ZFYVE26Q68DK2 2539 aa14.09□□□□□ -0.15
SDF4-206ENST00000478938 CHKB-CPT1BH3BT56 60 aa14.09□□□□□ -0.15
SDF4-206ENST00000478938 REG3AQ06141 175 aa14.09□□□□□ -0.15
SDF4-206ENST00000478938 C4orf3Q8WVX3 66 aa14.08□□□□□ -0.16
SDF4-206ENST00000478938 FBN2P35556 2912 aa14.08□□□□□ -0.16
SDF4-206ENST00000478938 ETDCA0A1B0GVM5 59 aa14.08□□□□□ -0.16
SDF4-206ENST00000478938 EPG5Q9HCE0 2579 aa14.07□□□□□ -0.16
SDF4-206ENST00000478938 M0R378 163 aa14.06□□□□□ -0.16
SDF4-206ENST00000478938 CSNK1G2-AS1Q8NCQ2 148 aa14.06□□□□□ -0.16
SDF4-206ENST00000478938 FLNCQ14315 2725 aa14.06□□□□□ -0.16
SDF4-206ENST00000478938 NBEAL2Q6ZNJ1 2754 aa14.05□□□□□ -0.16
SDF4-206ENST00000478938 A0A0J9YWU9 116 aa14.05□□□□□ -0.16
SDF4-206ENST00000478938 UBE2AP49459 152 aa14.05□□□□□ -0.16
SDF4-206ENST00000478938 IGSF10Q6WRI0 2623 aa14.04□□□□□ -0.16
SDF4-206ENST00000478938 KMT2BQ9UMN6 2715 aaPredicted RBP14.04□□□□□ -0.16
SDF4-206ENST00000478938 LINC00528Q8N1L1 170 aa14.04□□□□□ -0.16
SDF4-206ENST00000478938 CCL19Q99731 98 aa14.03□□□□□ -0.16
SDF4-206ENST00000478938 LYRM9A8MSI8 78 aa14.03□□□□□ -0.16
SDF4-206ENST00000478938 DEFB105AQ8NG35 78 aa14.03□□□□□ -0.16
SDF4-206ENST00000478938 USP9YO00507 2555 aaPredicted RBP14.03□□□□□ -0.16
SDF4-206ENST00000478938 PTPN13Q12923 2485 aa14.01□□□□□ -0.17
SDF4-206ENST00000478938 CENPEQ02224 2701 aa14□□□□□ -0.17
SDF4-206ENST00000478938 C6orf48Q9UBA6 75 aa14□□□□□ -0.17
SDF4-206ENST00000478938 HCG22E2RYF7 251 aa14□□□□□ -0.17
SDF4-206ENST00000478938 PRR15LQ9BU68 103 aa14□□□□□ -0.17
SDF4-206ENST00000478938 MAPK1IP1LQ8NDC0 245 aa13.98□□□□□ -0.17
SDF4-206ENST00000478938 K7EQZ3 153 aa13.98□□□□□ -0.17
SDF4-206ENST00000478938 KPRPQ5T749 579 aaPredicted RBP13.98□□□□□ -0.17
SDF4-206ENST00000478938 LCA10Q71F78 164 aa13.97□□□□□ -0.17
SDF4-206ENST00000478938 ESM1Q9NQ30 184 aa13.97□□□□□ -0.17
SDF4-206ENST00000478938 Q8N9P0 234 aaPredicted RBP13.97□□□□□ -0.17
SDF4-206ENST00000478938 B9D2Q9BPU9 175 aa13.96□□□□□ -0.17
SDF4-206ENST00000478938 VPREB1P12018 145 aa13.96□□□□□ -0.17
SDF4-206ENST00000478938 DSCR10P59022 87 aa13.96□□□□□ -0.17
SDF4-206ENST00000478938 A0A1W2PNM2 257 aa13.95□□□□□ -0.18
SDF4-206ENST00000478938 Q6YL49 198 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms