RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 SPTY2D1-AS1A0A0U1RR47 76 aa-0.81□□□□□ -2.54
HPS3-205ENST00000478525 LOC100130705A0A1B0GUX0 176 aa-0.81□□□□□ -2.54
HPS3-205ENST00000478525 H3BQF6 201 aa-0.81□□□□□ -2.54
HPS3-205ENST00000478525 ARPC4P59998 168 aa-0.81□□□□□ -2.54
HPS3-205ENST00000478525 WFDC13Q8IUB5 93 aa-0.81□□□□□ -2.54
HPS3-205ENST00000478525 ABCC5O15440 1437 aa-0.81□□□□□ -2.54
HPS3-205ENST00000478525 SHPRHQ149N8 1683 aa-0.81□□□□□ -2.54
HPS3-205ENST00000478525 APOBP04114 4563 aaKnown RBP-0.82□□□□□ -2.54
HPS3-205ENST00000478525 UBE2L5PA0A1B0GUS4 154 aa-0.82□□□□□ -2.54
HPS3-205ENST00000478525 FAM25AB3EWG3 89 aa-0.82□□□□□ -2.54
HPS3-205ENST00000478525 FAM25CB3EWG5 89 aa-0.82□□□□□ -2.54
HPS3-205ENST00000478525 FAM25GB3EWG6 89 aa-0.82□□□□□ -2.54
HPS3-205ENST00000478525 SELENOWP63302 87 aa-0.82□□□□□ -2.54
HPS3-205ENST00000478525 UBE2L3P68036 154 aaKnown RBP-0.82□□□□□ -2.54
HPS3-205ENST00000478525 COX6B2Q6YFQ2 88 aa-0.82□□□□□ -2.54
HPS3-205ENST00000478525 C6orf201Q7Z4U5 140 aa-0.82□□□□□ -2.54
HPS3-205ENST00000478525 PRO1854Q9UHT4 67 aa-0.82□□□□□ -2.54
HPS3-205ENST00000478525 A0A0C4DFX4 3053 aa-0.82□□□□□ -2.54
HPS3-205ENST00000478525 KALRNO60229 2985 aa-0.82□□□□□ -2.54
HPS3-205ENST00000478525 NCOA3Q9Y6Q9 1424 aa-0.82□□□□□ -2.54
HPS3-205ENST00000478525 SHROOM2Q13796 1616 aa-0.82□□□□□ -2.54
HPS3-205ENST00000478525 SACSQ9NZJ4 4579 aa-0.82□□□□□ -2.54
HPS3-205ENST00000478525 KTN1Q86UP2 1357 aaKnown RBP-0.83□□□□□ -2.54
HPS3-205ENST00000478525 RGPD3A6NKT7 1758 aaPredicted RBP-0.83□□□□□ -2.54
HPS3-205ENST00000478525 RGPD4Q7Z3J3 1758 aa-0.83□□□□□ -2.54
HPS3-205ENST00000478525 CEP290O15078 2479 aa-0.83□□□□□ -2.54
HPS3-205ENST00000478525 SCN7AQ01118 1682 aa-0.83□□□□□ -2.54
HPS3-205ENST00000478525 A2ML1A8K2U0 1454 aa-0.83□□□□□ -2.54
HPS3-205ENST00000478525 ADGRL2O95490 1459 aa-0.83□□□□□ -2.54
HPS3-205ENST00000478525 A0A0G2JND7 137 aa-0.83□□□□□ -2.54
HPS3-205ENST00000478525 NAP1L6A6NFF2 107 aa-0.83□□□□□ -2.54
HPS3-205ENST00000478525 H7BZZ5 65 aa-0.83□□□□□ -2.54
HPS3-205ENST00000478525 ARMS2P0C7Q2 107 aa-0.83□□□□□ -2.54
HPS3-205ENST00000478525 TSLPQ969D9 159 aa-0.83□□□□□ -2.54
HPS3-205ENST00000478525 CELSR3Q9NYQ7 3312 aa-0.83□□□□□ -2.54
HPS3-205ENST00000478525 DNAH7Q8WXX0 4024 aa-0.83□□□□□ -2.54
HPS3-205ENST00000478525 MON2Q7Z3U7 1717 aa-0.84□□□□□ -2.54
HPS3-205ENST00000478525 DNAH8Q96JB1 4490 aa-0.84□□□□□ -2.54
HPS3-205ENST00000478525 GCN1Q92616 2671 aaKnown RBP-0.84□□□□□ -2.54
HPS3-205ENST00000478525 TARBP1Q13395 1621 aaKnown RBP-0.84□□□□□ -2.54
HPS3-205ENST00000478525 FAM24AA6NFZ4 105 aa-0.84□□□□□ -2.54
HPS3-205ENST00000478525 FGF7P21781 194 aa-0.84□□□□□ -2.54
HPS3-205ENST00000478525 KRTDAPP60985 99 aa-0.84□□□□□ -2.54
HPS3-205ENST00000478525 GNG11P61952 73 aa-0.84□□□□□ -2.54
HPS3-205ENST00000478525 GNGT1P63211 74 aa-0.84□□□□□ -2.54
HPS3-205ENST00000478525 DR1Q01658 176 aa-0.84□□□□□ -2.54
HPS3-205ENST00000478525 CATR1Q13166 79 aa-0.84□□□□□ -2.54
HPS3-205ENST00000478525 ANP32BQ92688 251 aaKnown RBP-0.84□□□□□ -2.54
HPS3-205ENST00000478525 AP4S1Q9Y587 144 aa-0.84□□□□□ -2.54
HPS3-205ENST00000478525 UTP20O75691 2785 aaKnown RBP-0.84□□□□□ -2.54
HPS3-205ENST00000478525 QSER1Q2KHR3 1735 aa-0.84□□□□□ -2.54
HPS3-205ENST00000478525 PKD1L3Q7Z443 1732 aa-0.84□□□□□ -2.54
HPS3-205ENST00000478525 TIAM2Q8IVF5 1701 aa-0.84□□□□□ -2.54
HPS3-205ENST00000478525 TOP2BQ02880 1626 aa-0.85□□□□□ -2.55
HPS3-205ENST00000478525 ALKQ9UM73 1620 aa-0.85□□□□□ -2.55
HPS3-205ENST00000478525 REV3LO60673 3130 aa-0.85□□□□□ -2.55
HPS3-205ENST00000478525 TRBV7-7A0A0K0K1E9 115 aa-0.85□□□□□ -2.55
HPS3-205ENST00000478525 FAM223BA6NKX1 122 aa-0.85□□□□□ -2.55
HPS3-205ENST00000478525 MIF4GDA9UHW6 222 aaKnown RBP-0.85□□□□□ -2.55
HPS3-205ENST00000478525 H0Y9P7 68 aa-0.85□□□□□ -2.55
HPS3-205ENST00000478525 RPL38P63173 70 aaKnown RBP-0.85□□□□□ -2.55
HPS3-205ENST00000478525 MEIG1Q5JSS6 88 aa-0.85□□□□□ -2.55
HPS3-205ENST00000478525 LSM10Q969L4 123 aaKnown RBP-0.85□□□□□ -2.55
HPS3-205ENST00000478525 MANBALQ9NQG1 85 aa-0.85□□□□□ -2.55
HPS3-205ENST00000478525 LAMA3Q16787 3333 aa-0.85□□□□□ -2.55
HPS3-205ENST00000478525 FOCADQ5VW36 1801 aa-0.85□□□□□ -2.55
HPS3-205ENST00000478525 C5P01031 1676 aa-0.85□□□□□ -2.55
HPS3-205ENST00000478525 ABCA13Q86UQ4 5058 aa-0.85□□□□□ -2.55
HPS3-205ENST00000478525 H3BQ15 152 aa-0.86□□□□□ -2.55
HPS3-205ENST00000478525 Q0VG73 95 aa-0.86□□□□□ -2.55
HPS3-205ENST00000478525 LCN9Q8WX39 176 aa-0.86□□□□□ -2.55
HPS3-205ENST00000478525 CGREF1Q99674 301 aa-0.86□□□□□ -2.55
HPS3-205ENST00000478525 ACACBO00763 2458 aa-0.86□□□□□ -2.55
HPS3-205ENST00000478525 MYH4Q9Y623 1939 aa-0.86□□□□□ -2.55
HPS3-205ENST00000478525 ABCC2Q92887 1545 aa-0.86□□□□□ -2.55
HPS3-205ENST00000478525 C4AP0C0L4 1744 aa-0.86□□□□□ -2.55
HPS3-205ENST00000478525 C4BP0C0L5 1744 aa-0.86□□□□□ -2.55
HPS3-205ENST00000478525 PREX1Q8TCU6 1659 aa-0.87□□□□□ -2.55
HPS3-205ENST00000478525 ROBO1Q9Y6N7 1651 aa-0.87□□□□□ -2.55
HPS3-205ENST00000478525 ITPR1Q14643 2758 aa-0.87□□□□□ -2.55
HPS3-205ENST00000478525 CMYA5Q8N3K9 4069 aa-0.87□□□□□ -2.55
HPS3-205ENST00000478525 TMEM262E9PQX1 116 aa-0.87□□□□□ -2.55
HPS3-205ENST00000478525 PSMG4Q5JS54 123 aa-0.87□□□□□ -2.55
HPS3-205ENST00000478525 ALKAL2Q6UX46 152 aa-0.87□□□□□ -2.55
HPS3-205ENST00000478525 C7orf77A4D0Y5 90 aa-0.88□□□□□ -2.55
HPS3-205ENST00000478525 DEFB1P60022 68 aa-0.88□□□□□ -2.55
HPS3-205ENST00000478525 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.88□□□□□ -2.55
HPS3-205ENST00000478525 LINC00470Q9BZP3 86 aa-0.88□□□□□ -2.55
HPS3-205ENST00000478525 DYNC1H1Q14204 4646 aaKnown RBP-0.88□□□□□ -2.55
HPS3-205ENST00000478525 SCAPERQ9BY12 1400 aa-0.89□□□□□ -2.55
HPS3-205ENST00000478525 MAP3K1Q13233 1512 aa-0.89□□□□□ -2.55
HPS3-205ENST00000478525 CRYBG1Q9Y4K1 1723 aa-0.89□□□□□ -2.55
HPS3-205ENST00000478525 FRYQ5TBA9 3013 aa-0.89□□□□□ -2.55
HPS3-205ENST00000478525 NDUFC1O43677 76 aa-0.89□□□□□ -2.55
HPS3-205ENST00000478525 C3orf79P0CE67 100 aa-0.89□□□□□ -2.55
HPS3-205ENST00000478525 AKAIN1P0CW23 69 aa-0.89□□□□□ -2.55
HPS3-205ENST00000478525 LINC00474Q9P2X8 69 aa-0.89□□□□□ -2.55
HPS3-205ENST00000478525 TOPAZ1Q8N9V7 1692 aa-0.89□□□□□ -2.55
HPS3-205ENST00000478525 CHD1O14646 1710 aa-0.89□□□□□ -2.55
HPS3-205ENST00000478525 COL6A5A8TX70 2615 aa-0.9□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms