RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 CCL18P55774 89 aa2.93□□□□□ -1.94
GPNMB-210ENST00000478451 C5orf38Q86SI9 138 aa2.93□□□□□ -1.94
GPNMB-210ENST00000478451 LINC00337Q8N6G1 96 aa2.93□□□□□ -1.94
GPNMB-210ENST00000478451 LINC00526Q96FQ7 95 aa2.93□□□□□ -1.94
GPNMB-210ENST00000478451 OBSCN-AS1Q96MR7 158 aa2.93□□□□□ -1.94
GPNMB-210ENST00000478451 PRO0255Q9UI72 69 aa2.93□□□□□ -1.94
GPNMB-210ENST00000478451 KLK5Q9Y337 293 aaPredicted RBP2.93□□□□□ -1.94
GPNMB-210ENST00000478451 MAP1AP78559 2803 aaPredicted RBP2.93□□□□□ -1.94
GPNMB-210ENST00000478451 CHD6Q8TD26 2715 aa2.93□□□□□ -1.94
GPNMB-210ENST00000478451 USP9XQ93008 2570 aaPredicted RBP2.93□□□□□ -1.94
GPNMB-210ENST00000478451 MYO9AB2RTY4 2548 aa2.92□□□□□ -1.94
GPNMB-210ENST00000478451 PIEZO1Q92508 2521 aa2.92□□□□□ -1.94
GPNMB-210ENST00000478451 TEX15Q9BXT5 2789 aa2.92□□□□□ -1.94
GPNMB-210ENST00000478451 VPS13CQ709C8 3753 aa2.92□□□□□ -1.94
GPNMB-210ENST00000478451 IGKV2-28A0A075B6P5 120 aa2.92□□□□□ -1.94
GPNMB-210ENST00000478451 PLAC8L1A1L4L8 177 aa2.92□□□□□ -1.94
GPNMB-210ENST00000478451 IGKV2D-28P01615 120 aa2.92□□□□□ -1.94
GPNMB-210ENST00000478451 PFN2P35080 140 aa2.92□□□□□ -1.94
GPNMB-210ENST00000478451 RPL18AQ02543 176 aaKnown RBP2.92□□□□□ -1.94
GPNMB-210ENST00000478451 LINC00612Q8N6U2 182 aa2.92□□□□□ -1.94
GPNMB-210ENST00000478451 CSNK1G2-AS1Q8NCQ2 148 aa2.92□□□□□ -1.94
GPNMB-210ENST00000478451 LINC00167Q96N53 147 aa2.92□□□□□ -1.94
GPNMB-210ENST00000478451 CREBBPQ92793 2442 aa2.92□□□□□ -1.94
GPNMB-210ENST00000478451 SPG11Q96JI7 2443 aa2.91□□□□□ -1.94
GPNMB-210ENST00000478451 IGLV4-60A0A075B6I1 120 aa2.91□□□□□ -1.94
GPNMB-210ENST00000478451 TRBV10-3A0A0K0K1G6 114 aa2.91□□□□□ -1.94
GPNMB-210ENST00000478451 LOC100131303A0A0U1RQF7 123 aa2.91□□□□□ -1.94
GPNMB-210ENST00000478451 hADV29S1A0JD25 119 aa2.91□□□□□ -1.94
GPNMB-210ENST00000478451 RPL37AP8A6NKH3 93 aa2.91□□□□□ -1.94
GPNMB-210ENST00000478451 J3KT08 172 aa2.91□□□□□ -1.94
GPNMB-210ENST00000478451 CCKP06307 115 aa2.91□□□□□ -1.94
GPNMB-210ENST00000478451 CRYGAP11844 174 aa2.91□□□□□ -1.94
GPNMB-210ENST00000478451 PDE6GP18545 87 aa2.91□□□□□ -1.94
GPNMB-210ENST00000478451 APOC4P55056 127 aa2.91□□□□□ -1.94
GPNMB-210ENST00000478451 HIST1H4AP62805 103 aaKnown RBP2.91□□□□□ -1.94
GPNMB-210ENST00000478451 C9orf66Q5T8R8 295 aa2.91□□□□□ -1.94
GPNMB-210ENST00000478451 LCE3AQ5TA76 89 aa2.91□□□□□ -1.94
GPNMB-210ENST00000478451 SMIM20Q8N5G0 67 aa2.91□□□□□ -1.94
GPNMB-210ENST00000478451 SERP2Q8N6R1 65 aa2.91□□□□□ -1.94
GPNMB-210ENST00000478451 LINC01006Q8NI28 216 aa2.91□□□□□ -1.94
GPNMB-210ENST00000478451 SMCR5Q8TEV8 140 aa2.91□□□□□ -1.94
GPNMB-210ENST00000478451 UBL5Q9BZL1 73 aa2.91□□□□□ -1.94
GPNMB-210ENST00000478451 C14orf132Q9NPU4 83 aa2.91□□□□□ -1.94
GPNMB-210ENST00000478451 WNK1Q9H4A3 2382 aa2.91□□□□□ -1.94
GPNMB-210ENST00000478451 SETXQ7Z333 2677 aaKnown RBP2.91□□□□□ -1.94
GPNMB-210ENST00000478451 CENPEQ02224 2701 aa2.91□□□□□ -1.94
GPNMB-210ENST00000478451 AKAP9Q99996 3911 aa2.9□□□□□ -1.95
GPNMB-210ENST00000478451 BCE1O60756 84 aa2.9□□□□□ -1.95
GPNMB-210ENST00000478451 GIG44P09565 113 aaPredicted RBP2.9□□□□□ -1.95
GPNMB-210ENST00000478451 DEFB130BP0DP73 79 aa2.9□□□□□ -1.95
GPNMB-210ENST00000478451 DEFB130AP0DP74 79 aa2.9□□□□□ -1.95
GPNMB-210ENST00000478451 XCL1P47992 114 aa2.9□□□□□ -1.95
GPNMB-210ENST00000478451 TMEM258P61165 79 aa2.9□□□□□ -1.95
GPNMB-210ENST00000478451 Q8N377 158 aa2.9□□□□□ -1.95
GPNMB-210ENST00000478451 Q8N814 137 aa2.9□□□□□ -1.95
GPNMB-210ENST00000478451 LRRK2Q5S007 2527 aa2.9□□□□□ -1.95
GPNMB-210ENST00000478451 ITPR3Q14573 2671 aa2.9□□□□□ -1.95
GPNMB-210ENST00000478451 SVEP1Q4LDE5 3571 aa2.9□□□□□ -1.95
GPNMB-210ENST00000478451 ZANQ9Y493 2812 aa2.89□□□□□ -1.95
GPNMB-210ENST00000478451 NDUFC2-KCTD14E9PQ53 114 aa2.89□□□□□ -1.95
GPNMB-210ENST00000478451 ANGP03950 147 aaKnown RBP2.89□□□□□ -1.95
GPNMB-210ENST00000478451 DAD1P61803 113 aa2.89□□□□□ -1.95
GPNMB-210ENST00000478451 RPS28P62857 69 aaKnown RBP2.89□□□□□ -1.95
GPNMB-210ENST00000478451 REG3GQ6UW15 175 aa2.89□□□□□ -1.95
GPNMB-210ENST00000478451 C11orf68Q9H3H3 251 aaKnown RBP2.89□□□□□ -1.95
GPNMB-210ENST00000478451 C22orf24Q9Y442 160 aa2.89□□□□□ -1.95
GPNMB-210ENST00000478451 USP9YO00507 2555 aaPredicted RBP2.88□□□□□ -1.95
GPNMB-210ENST00000478451 LOC110117498A0A087WWA1 95 aa2.88□□□□□ -1.95
GPNMB-210ENST00000478451 NCR3O14931 201 aa2.88□□□□□ -1.95
GPNMB-210ENST00000478451 MIFP14174 115 aa2.88□□□□□ -1.95
GPNMB-210ENST00000478451 RBM3P98179 157 aaKnown RBP2.88□□□□□ -1.95
GPNMB-210ENST00000478451 REG3AQ06141 175 aa2.88□□□□□ -1.95
GPNMB-210ENST00000478451 LINC00269Q8N2A0 174 aa2.88□□□□□ -1.95
GPNMB-210ENST00000478451 WFDC11Q8NEX6 87 aa2.88□□□□□ -1.95
GPNMB-210ENST00000478451 CHCHD10Q8WYQ3 142 aaPredicted RBP2.88□□□□□ -1.95
GPNMB-210ENST00000478451 WFDC10AQ9H1F0 79 aa2.88□□□□□ -1.95
GPNMB-210ENST00000478451 LINC00846Q9NV44 126 aa2.88□□□□□ -1.95
GPNMB-210ENST00000478451 NAV2Q8IVL1 2488 aa2.88□□□□□ -1.95
GPNMB-210ENST00000478451 TLN2Q9Y4G6 2542 aa2.88□□□□□ -1.95
GPNMB-210ENST00000478451 ACACBO00763 2458 aa2.87□□□□□ -1.95
GPNMB-210ENST00000478451 FAM208BQ5VWN6 2430 aa2.87□□□□□ -1.95
GPNMB-210ENST00000478451 GVQW2A0A096LPI5 108 aaPredicted RBP2.87□□□□□ -1.95
GPNMB-210ENST00000478451 IGKV3D-7A0A0C4DH55 119 aa2.87□□□□□ -1.95
GPNMB-210ENST00000478451 TRBV7-6A0A0J9YX20 115 aa2.87□□□□□ -1.95
GPNMB-210ENST00000478451 SPAG11BQ08648 103 aa2.87□□□□□ -1.95
GPNMB-210ENST00000478451 LELP1Q5T871 98 aa2.87□□□□□ -1.95
GPNMB-210ENST00000478451 LINC00575Q6W349 94 aa2.87□□□□□ -1.95
GPNMB-210ENST00000478451 DSCR8Q96T75 97 aa2.87□□□□□ -1.95
GPNMB-210ENST00000478451 LAMTOR3Q9UHA4 124 aa2.87□□□□□ -1.95
GPNMB-210ENST00000478451 COL12A1Q99715 3063 aa2.87□□□□□ -1.95
GPNMB-210ENST00000478451 APCP25054 2843 aa2.87□□□□□ -1.95
GPNMB-210ENST00000478451 FLNAP21333 2647 aaKnown RBP2.87□□□□□ -1.95
GPNMB-210ENST00000478451 EPG5Q9HCE0 2579 aa2.86□□□□□ -1.95
GPNMB-210ENST00000478451 SPART-AS1P0CW21 52 aa2.86□□□□□ -1.95
GPNMB-210ENST00000478451 KIAA0087Q14695 138 aa2.86□□□□□ -1.95
GPNMB-210ENST00000478451 C6orf99Q4VX62 202 aa2.86□□□□□ -1.95
GPNMB-210ENST00000478451 CLPSL2Q6UWE3 100 aa2.86□□□□□ -1.95
GPNMB-210ENST00000478451 LYPD5Q6UWN5 251 aa2.86□□□□□ -1.95
GPNMB-210ENST00000478451 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.86□□□□□ -1.95
GPNMB-210ENST00000478451 C6orf223Q8N319 242 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms