RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 ZZEF1O43149 2961 aa1.3□□□□□ -2.2
SMNDC1-205ENST00000477763 FRYQ5TBA9 3013 aa1.3□□□□□ -2.2
SMNDC1-205ENST00000477763 MYH4Q9Y623 1939 aa1.3□□□□□ -2.2
SMNDC1-205ENST00000477763 MYO9AB2RTY4 2548 aa1.3□□□□□ -2.2
SMNDC1-205ENST00000477763 ALPK2Q86TB3 2170 aa1.3□□□□□ -2.2
SMNDC1-205ENST00000477763 SSC5DA1L4H1 1573 aa1.3□□□□□ -2.2
SMNDC1-205ENST00000477763 COL4A6Q14031 1691 aa1.29□□□□□ -2.2
SMNDC1-205ENST00000477763 CNOT1A5YKK6 2376 aaKnown RBP1.29□□□□□ -2.2
SMNDC1-205ENST00000477763 PLXNA1Q9UIW2 1896 aa1.29□□□□□ -2.2
SMNDC1-205ENST00000477763 HECTD1Q9ULT8 2610 aa1.29□□□□□ -2.2
SMNDC1-205ENST00000477763 TNRC6AQ8NDV7 1962 aaKnown RBP1.29□□□□□ -2.2
SMNDC1-205ENST00000477763 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.29□□□□□ -2.2
SMNDC1-205ENST00000477763 F8VRH5 84 aa1.29□□□□□ -2.2
SMNDC1-205ENST00000477763 FXYD1O00168 92 aa1.29□□□□□ -2.2
SMNDC1-205ENST00000477763 ACYP1P07311 99 aa1.29□□□□□ -2.2
SMNDC1-205ENST00000477763 IGLC2P0DOY2 106 aa1.29□□□□□ -2.2
SMNDC1-205ENST00000477763 IGLC3P0DOY3 106 aa1.29□□□□□ -2.2
SMNDC1-205ENST00000477763 EFNA4P52798 201 aa1.29□□□□□ -2.2
SMNDC1-205ENST00000477763 C10orf99Q6UWK7 81 aa1.29□□□□□ -2.2
SMNDC1-205ENST00000477763 CCL19Q99731 98 aa1.29□□□□□ -2.2
SMNDC1-205ENST00000477763 SMCO4Q9NRQ5 59 aa1.29□□□□□ -2.2
SMNDC1-205ENST00000477763 LINC01558Q9Y6Z2 57 aa1.29□□□□□ -2.2
SMNDC1-205ENST00000477763 FRYLO94915 3013 aa1.29□□□□□ -2.2
SMNDC1-205ENST00000477763 DMXL1Q9Y485 3027 aa1.29□□□□□ -2.2
SMNDC1-205ENST00000477763 VPS13AQ96RL7 3174 aa1.29□□□□□ -2.2
SMNDC1-205ENST00000477763 WDFY3Q8IZQ1 3526 aa1.29□□□□□ -2.2
SMNDC1-205ENST00000477763 ITPR3Q14573 2671 aa1.29□□□□□ -2.2
SMNDC1-205ENST00000477763 AKAP13Q12802 2813 aa1.29□□□□□ -2.2
SMNDC1-205ENST00000477763 TJP1Q07157 1748 aa1.29□□□□□ -2.2
SMNDC1-205ENST00000477763 DLEC1Q9Y238 1755 aa1.29□□□□□ -2.2
SMNDC1-205ENST00000477763 PATJQ8NI35 1801 aa1.29□□□□□ -2.2
SMNDC1-205ENST00000477763 TANC1Q9C0D5 1861 aa1.29□□□□□ -2.2
SMNDC1-205ENST00000477763 ASPMQ8IZT6 3477 aa1.28□□□□□ -2.2
SMNDC1-205ENST00000477763 UBR5O95071 2799 aaPredicted RBP1.28□□□□□ -2.2
SMNDC1-205ENST00000477763 ZNF815PA8K554 130 aa1.28□□□□□ -2.2
SMNDC1-205ENST00000477763 C10orf142B7Z368 130 aa1.28□□□□□ -2.2
SMNDC1-205ENST00000477763 M0R135 149 aa1.28□□□□□ -2.2
SMNDC1-205ENST00000477763 UQCR11O14957 56 aa1.28□□□□□ -2.2
SMNDC1-205ENST00000477763 HMGN3Q15651 99 aa1.28□□□□□ -2.2
SMNDC1-205ENST00000477763 PSMG4Q5JS54 123 aa1.28□□□□□ -2.2
SMNDC1-205ENST00000477763 BVES-AS1Q5T3Y7 98 aa1.28□□□□□ -2.2
SMNDC1-205ENST00000477763 LINC00643Q86TS7 51 aa1.28□□□□□ -2.2
SMNDC1-205ENST00000477763 BAGE3Q86Y29 109 aa1.28□□□□□ -2.2
SMNDC1-205ENST00000477763 ARL2-SNX15V9GYD0 113 aa1.28□□□□□ -2.2
SMNDC1-205ENST00000477763 ARFGEF3Q5TH69 2177 aa1.28□□□□□ -2.2
SMNDC1-205ENST00000477763 CEP295Q9C0D2 2601 aa1.28□□□□□ -2.2
SMNDC1-205ENST00000477763 TENM4Q6N022 2769 aa1.28□□□□□ -2.2
SMNDC1-205ENST00000477763 KALRNO60229 2985 aa1.28□□□□□ -2.2
SMNDC1-205ENST00000477763 ASH1LQ9NR48 2969 aaKnown RBP1.28□□□□□ -2.2
SMNDC1-205ENST00000477763 ITPR1Q14643 2758 aa1.27□□□□□ -2.21
SMNDC1-205ENST00000477763 TEX15Q9BXT5 2789 aa1.27□□□□□ -2.21
SMNDC1-205ENST00000477763 IGSF10Q6WRI0 2623 aa1.27□□□□□ -2.21
SMNDC1-205ENST00000477763 FAM208BQ5VWN6 2430 aa1.27□□□□□ -2.21
SMNDC1-205ENST00000477763 Q5BKY6 102 aa1.27□□□□□ -2.21
SMNDC1-205ENST00000477763 CFAP126Q5VTH2 177 aa1.27□□□□□ -2.21
SMNDC1-205ENST00000477763 BAGE2Q86Y30 109 aa1.27□□□□□ -2.21
SMNDC1-205ENST00000477763 Q96NJ1 140 aa1.27□□□□□ -2.21
SMNDC1-205ENST00000477763 LAMA5O15230 3695 aa1.27□□□□□ -2.21
SMNDC1-205ENST00000477763 UTP20O75691 2785 aaKnown RBP1.27□□□□□ -2.21
SMNDC1-205ENST00000477763 IGF2RP11717 2491 aa1.27□□□□□ -2.21
SMNDC1-205ENST00000477763 DOPEY1Q5JWR5 2465 aa1.27□□□□□ -2.21
SMNDC1-205ENST00000477763 SMG1Q96Q15 3661 aaKnown RBP1.27□□□□□ -2.21
SMNDC1-205ENST00000477763 ZGRF1Q86YA3 2104 aa1.27□□□□□ -2.21
SMNDC1-205ENST00000477763 MYO18AQ92614 2054 aaKnown RBP1.27□□□□□ -2.21
SMNDC1-205ENST00000477763 DLG5Q8TDM6 1919 aa1.27□□□□□ -2.21
SMNDC1-205ENST00000477763 KDM3BQ7LBC6 1761 aa1.26□□□□□ -2.21
SMNDC1-205ENST00000477763 DUOX1Q9NRD9 1551 aa1.26□□□□□ -2.21
SMNDC1-205ENST00000477763 POLQO75417 2590 aa1.26□□□□□ -2.21
SMNDC1-205ENST00000477763 SETD2Q9BYW2 2564 aaPredicted RBP1.26□□□□□ -2.21
SMNDC1-205ENST00000477763 DNHD1Q96M86 4753 aa1.26□□□□□ -2.21
SMNDC1-205ENST00000477763 NBPF19A0A087WUL8 3843 aa1.26□□□□□ -2.21
SMNDC1-205ENST00000477763 FAM223BA6NKX1 122 aa1.26□□□□□ -2.21
SMNDC1-205ENST00000477763 PDCD5O14737 125 aa1.26□□□□□ -2.21
SMNDC1-205ENST00000477763 HMGN2P05204 90 aaKnown RBP1.26□□□□□ -2.21
SMNDC1-205ENST00000477763 EXPH5Q8NEV8 1989 aa1.26□□□□□ -2.21
SMNDC1-205ENST00000477763 DMXL2Q8TDJ6 3036 aa1.26□□□□□ -2.21
SMNDC1-205ENST00000477763 TET1Q8NFU7 2136 aa1.25□□□□□ -2.21
SMNDC1-205ENST00000477763 CFAP46Q8IYW2 2715 aa1.25□□□□□ -2.21
SMNDC1-205ENST00000477763 SPEGQ15772 3267 aa1.25□□□□□ -2.21
SMNDC1-205ENST00000477763 TRGV1A0A0A0MS02 117 aa1.25□□□□□ -2.21
SMNDC1-205ENST00000477763 TRBV30A0A0K0K1B3 111 aa1.25□□□□□ -2.21
SMNDC1-205ENST00000477763 CTXND1A0A1B0GTU2 59 aa1.25□□□□□ -2.21
SMNDC1-205ENST00000477763 F8WEM9 126 aa1.25□□□□□ -2.21
SMNDC1-205ENST00000477763 H3BUT2 72 aa1.25□□□□□ -2.21
SMNDC1-205ENST00000477763 MGPP08493 103 aa1.25□□□□□ -2.21
SMNDC1-205ENST00000477763 ZNF137PP52743 207 aa1.25□□□□□ -2.21
SMNDC1-205ENST00000477763 DEFA5Q01523 94 aa1.25□□□□□ -2.21
SMNDC1-205ENST00000477763 COX17Q14061 63 aa1.25□□□□□ -2.21
SMNDC1-205ENST00000477763 LINC00575Q6W349 94 aa1.25□□□□□ -2.21
SMNDC1-205ENST00000477763 C18orf32Q8TCD1 76 aa1.25□□□□□ -2.21
SMNDC1-205ENST00000477763 SMIM4Q8WVI0 70 aa1.25□□□□□ -2.21
SMNDC1-205ENST00000477763 COL6A6A6NMZ7 2263 aa1.25□□□□□ -2.21
SMNDC1-205ENST00000477763 DDX60LQ5H9U9 1706 aaKnown RBP1.25□□□□□ -2.21
SMNDC1-205ENST00000477763 ANKRD17O75179 2603 aaKnown RBP1.25□□□□□ -2.21
SMNDC1-205ENST00000477763 SNRNP200O75643 2136 aaKnown RBP1.25□□□□□ -2.21
SMNDC1-205ENST00000477763 CREBBPQ92793 2442 aa1.25□□□□□ -2.21
SMNDC1-205ENST00000477763 PLXNB2O15031 1838 aa1.24□□□□□ -2.21
SMNDC1-205ENST00000477763 INTS1Q8N201 2190 aaKnown RBP1.24□□□□□ -2.21
SMNDC1-205ENST00000477763 BCORQ6W2J9 1755 aa1.24□□□□□ -2.21
SMNDC1-205ENST00000477763 SPTA1P02549 2419 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms