RNA–Protein interactions for RNA: ENST00000477590.1

SYCP1-206, Transcript of synaptonemal complex protein 1, humanhuman

TSL 2

Gene SYCP1, Length 800 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-206ENST00000477590 NCOA3Q9Y6Q9 1424 aa-1.19□□□□□ -2.6
SYCP1-206ENST00000477590 SPHKAPQ2M3C7 1700 aa-1.2□□□□□ -2.6
SYCP1-206ENST00000477590 DEFB107AQ8IZN7 70 aa-1.2□□□□□ -2.6
SYCP1-206ENST00000477590 IER3IP1Q9Y5U9 82 aa-1.2□□□□□ -2.6
SYCP1-206ENST00000477590 BIRC6Q9NR09 4857 aa-1.2□□□□□ -2.6
SYCP1-206ENST00000477590 VPS13BQ7Z7G8 4022 aa-1.2□□□□□ -2.6
SYCP1-206ENST00000477590 DMXL1Q9Y485 3027 aa-1.2□□□□□ -2.6
SYCP1-206ENST00000477590 TEP1Q99973 2627 aaKnown RBP-1.2□□□□□ -2.6
SYCP1-206ENST00000477590 TROQ12816 1431 aaPredicted RBP-1.21□□□□□ -2.6
SYCP1-206ENST00000477590 MRPL34Q9BQ48 92 aaKnown RBP-1.21□□□□□ -2.6
SYCP1-206ENST00000477590 TOPAZ1Q8N9V7 1692 aa-1.21□□□□□ -2.6
SYCP1-206ENST00000477590 MYO18BQ8IUG5 2567 aa-1.21□□□□□ -2.6
SYCP1-206ENST00000477590 hADV29S1A0JD25 119 aa-1.22□□□□□ -2.6
SYCP1-206ENST00000477590 ARHGAP5Q13017 1502 aa-1.22□□□□□ -2.6
SYCP1-206ENST00000477590 ZZEF1O43149 2961 aa-1.23□□□□□ -2.61
SYCP1-206ENST00000477590 ABCC5O15440 1437 aa-1.23□□□□□ -2.61
SYCP1-206ENST00000477590 EDC4Q6P2E9 1401 aaKnown RBP-1.23□□□□□ -2.61
SYCP1-206ENST00000477590 PZPP20742 1482 aa-1.23□□□□□ -2.61
SYCP1-206ENST00000477590 SAA2P0DJI9 122 aaPredicted RBP-1.23□□□□□ -2.61
SYCP1-206ENST00000477590 GNG4P50150 75 aa-1.23□□□□□ -2.61
SYCP1-206ENST00000477590 LINC00846Q9NV44 126 aa-1.23□□□□□ -2.61
SYCP1-206ENST00000477590 DNAH2Q9P225 4427 aa-1.24□□□□□ -2.61
SYCP1-206ENST00000477590 C7orf77A4D0Y5 90 aa-1.24□□□□□ -2.61
SYCP1-206ENST00000477590 CRYM-AS1A6NIL9 109 aa-1.24□□□□□ -2.61
SYCP1-206ENST00000477590 MT1AP04731 61 aa-1.24□□□□□ -2.61
SYCP1-206ENST00000477590 SNCAP37840 140 aa-1.24□□□□□ -2.61
SYCP1-206ENST00000477590 PPP3R1P63098 170 aa-1.24□□□□□ -2.61
SYCP1-206ENST00000477590 WFDC13Q8IUB5 93 aa-1.24□□□□□ -2.61
SYCP1-206ENST00000477590 KIAA1551Q9HCM1 1747 aa-1.24□□□□□ -2.61
SYCP1-206ENST00000477590 CCDC141Q6ZP82 1450 aa-1.24□□□□□ -2.61
SYCP1-206ENST00000477590 ANKRD36A6QL64 1941 aa-1.25□□□□□ -2.61
SYCP1-206ENST00000477590 COL14A1Q05707 1796 aaKnown RBP-1.25□□□□□ -2.61
SYCP1-206ENST00000477590 A0A0G2JND7 137 aa-1.25□□□□□ -2.61
SYCP1-206ENST00000477590 I3L3M4 83 aa-1.25□□□□□ -2.61
SYCP1-206ENST00000477590 PDCD11Q14690 1871 aaKnown RBP-1.25□□□□□ -2.61
SYCP1-206ENST00000477590 NRKQ7Z2Y5 1582 aa-1.25□□□□□ -2.61
SYCP1-206ENST00000477590 DLEU1O43261 78 aa-1.26□□□□□ -2.61
SYCP1-206ENST00000477590 NRXN1Q9ULB1 1477 aa-1.26□□□□□ -2.61
SYCP1-206ENST00000477590 CICQ96RK0 1608 aaPredicted RBP-1.26□□□□□ -2.61
SYCP1-206ENST00000477590 SHPRHQ149N8 1683 aa-1.26□□□□□ -2.61
SYCP1-206ENST00000477590 LAMA1P25391 3075 aa-1.26□□□□□ -2.61
SYCP1-206ENST00000477590 H0Y9P7 68 aa-1.27□□□□□ -2.61
SYCP1-206ENST00000477590 HEPN1Q6WQI6 88 aa-1.27□□□□□ -2.61
SYCP1-206ENST00000477590 MON2Q7Z3U7 1717 aa-1.27□□□□□ -2.61
SYCP1-206ENST00000477590 ABCA3Q99758 1704 aa-1.27□□□□□ -2.61
SYCP1-206ENST00000477590 KALRNO60229 2985 aa-1.28□□□□□ -2.61
SYCP1-206ENST00000477590 LRRC37AA6NMS7 1700 aa-1.28□□□□□ -2.61
SYCP1-206ENST00000477590 EFCAB10A6NFE3 127 aa-1.28□□□□□ -2.61
SYCP1-206ENST00000477590 KRTDAPP60985 99 aa-1.28□□□□□ -2.61
SYCP1-206ENST00000477590 LINC00587B1AMM8 73 aa-1.29□□□□□ -2.62
SYCP1-206ENST00000477590 S100A1P23297 94 aa-1.29□□□□□ -2.62
SYCP1-206ENST00000477590 GCN1Q92616 2671 aaKnown RBP-1.29□□□□□ -2.62
SYCP1-206ENST00000477590 PLECQ15149 4684 aaKnown RBP-1.29□□□□□ -2.62
SYCP1-206ENST00000477590 MAPKBP1O60336 1514 aa-1.3□□□□□ -2.62
SYCP1-206ENST00000477590 H3BQ15 152 aa-1.3□□□□□ -2.62
SYCP1-206ENST00000477590 CORTO00230 105 aa-1.3□□□□□ -2.62
SYCP1-206ENST00000477590 VAMP8Q9BV40 100 aa-1.3□□□□□ -2.62
SYCP1-206ENST00000477590 CACFD1Q9UGQ2 172 aa-1.3□□□□□ -2.62
SYCP1-206ENST00000477590 C5P01031 1676 aa-1.3□□□□□ -2.62
SYCP1-206ENST00000477590 SAMD9Q5K651 1589 aa-1.3□□□□□ -2.62
SYCP1-206ENST00000477590 PDE4DIPQ5VU43 2346 aa-1.31□□□□□ -2.62
SYCP1-206ENST00000477590 ANKRD11Q6UB99 2663 aaPredicted RBP-1.31□□□□□ -2.62
SYCP1-206ENST00000477590 H7BZZ5 65 aa-1.31□□□□□ -2.62
SYCP1-206ENST00000477590 SCN11AQ9UI33 1791 aa-1.31□□□□□ -2.62
SYCP1-206ENST00000477590 TMEM262E9PQX1 116 aa-1.32□□□□□ -2.62
SYCP1-206ENST00000477590 H3BNG1 76 aa-1.32□□□□□ -2.62
SYCP1-206ENST00000477590 H3BQF6 201 aa-1.32□□□□□ -2.62
SYCP1-206ENST00000477590 GNGT1P63211 74 aa-1.32□□□□□ -2.62
SYCP1-206ENST00000477590 BCORQ6W2J9 1755 aa-1.33□□□□□ -2.62
SYCP1-206ENST00000477590 TRBV25-1A0A075B6N4 114 aa-1.33□□□□□ -2.62
SYCP1-206ENST00000477590 PSMG4Q5JS54 123 aa-1.33□□□□□ -2.62
SYCP1-206ENST00000477590 C4AP0C0L4 1744 aa-1.33□□□□□ -2.62
SYCP1-206ENST00000477590 C4BP0C0L5 1744 aa-1.33□□□□□ -2.62
SYCP1-206ENST00000477590 MLH3Q9UHC1 1453 aa-1.33□□□□□ -2.62
SYCP1-206ENST00000477590 SACSQ9NZJ4 4579 aa-1.33□□□□□ -2.62
SYCP1-206ENST00000477590 RYR2Q92736 4967 aa-1.33□□□□□ -2.62
SYCP1-206ENST00000477590 WDR87Q6ZQQ6 2873 aa-1.33□□□□□ -2.62
SYCP1-206ENST00000477590 DNAH1Q9P2D7 4330 aa-1.34□□□□□ -2.62
SYCP1-206ENST00000477590 EIF4G3O43432 1585 aaKnown RBP-1.34□□□□□ -2.62
SYCP1-206ENST00000477590 TRBV7-7A0A0K0K1E9 115 aa-1.34□□□□□ -2.62
SYCP1-206ENST00000477590 MT-ATP8P03928 68 aa-1.34□□□□□ -2.62
SYCP1-206ENST00000477590 ARMS2P0C7Q2 107 aa-1.34□□□□□ -2.62
SYCP1-206ENST00000477590 CGREF1Q99674 301 aa-1.34□□□□□ -2.62
SYCP1-206ENST00000477590 CDKN2A-AS1Q9UH64 79 aa-1.34□□□□□ -2.62
SYCP1-206ENST00000477590 GNG8Q9UK08 70 aa-1.34□□□□□ -2.62
SYCP1-206ENST00000477590 LAMA3Q16787 3333 aa-1.34□□□□□ -2.62
SYCP1-206ENST00000477590 RNF213Q63HN8 5207 aa-1.34□□□□□ -2.62
SYCP1-206ENST00000477590 PRDM15P57071 1507 aaPredicted RBP-1.35□□□□□ -2.62
SYCP1-206ENST00000477590 TRAV30A0A087WSZ9 112 aa-1.35□□□□□ -2.63
SYCP1-206ENST00000477590 SPTY2D1-AS1A0A0U1RR47 76 aa-1.35□□□□□ -2.63
SYCP1-206ENST00000477590 PSENENQ9NZ42 101 aa-1.35□□□□□ -2.63
SYCP1-206ENST00000477590 HIGD1BQ9P298 99 aa-1.35□□□□□ -2.63
SYCP1-206ENST00000477590 RGPD2P0DJD1 1756 aa-1.35□□□□□ -2.63
SYCP1-206ENST00000477590 ZFYVE16Q7Z3T8 1539 aa-1.35□□□□□ -2.63
SYCP1-206ENST00000477590 PREX1Q8TCU6 1659 aa-1.35□□□□□ -2.63
SYCP1-206ENST00000477590 H0YGG7 62 aa-1.36□□□□□ -2.63
SYCP1-206ENST00000477590 GNGT2O14610 69 aa-1.36□□□□□ -2.63
SYCP1-206ENST00000477590 NDUFA3O95167 84 aa-1.36□□□□□ -2.63
SYCP1-206ENST00000477590 IGLC2P0DOY2 106 aa-1.36□□□□□ -2.63
SYCP1-206ENST00000477590 IGLC3P0DOY3 106 aa-1.36□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms