RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 PSPHP1O15172 72 aa8.83□□□□□ -1
RTFDC1-207ENST00000477573 NOTCH2Q04721 2471 aa8.82□□□□□ -1
RTFDC1-207ENST00000477573 NF1P21359 2839 aa8.82□□□□□ -1
RTFDC1-207ENST00000477573 SMIM1B2RUZ4 78 aa8.82□□□□□ -1
RTFDC1-207ENST00000477573 PDE6GP18545 87 aa8.82□□□□□ -1
RTFDC1-207ENST00000477573 RNASE13Q5GAN3 156 aaKnown RBP8.82□□□□□ -1
RTFDC1-207ENST00000477573 LINC01006Q8NI28 216 aa8.82□□□□□ -1
RTFDC1-207ENST00000477573 LY6G6DO95868 133 aa8.81□□□□□ -1
RTFDC1-207ENST00000477573 Q6ZTI0 123 aa8.81□□□□□ -1
RTFDC1-207ENST00000477573 TRBV10-1A0A0K0K1A3 114 aa8.8□□□□□ -1
RTFDC1-207ENST00000477573 CCL24O00175 119 aa8.8□□□□□ -1
RTFDC1-207ENST00000477573 C1orf64Q8NEQ6 169 aa8.8□□□□□ -1
RTFDC1-207ENST00000477573 LINC00269Q8N2A0 174 aa8.79□□□□□ -1
RTFDC1-207ENST00000477573 Q8N814 137 aa8.79□□□□□ -1
RTFDC1-207ENST00000477573 C11orf44Q8N8P7 122 aa8.79□□□□□ -1
RTFDC1-207ENST00000477573 CHCHD7Q9BUK0 85 aa8.79□□□□□ -1
RTFDC1-207ENST00000477573 OCR1Q9BZK8 76 aa8.79□□□□□ -1
RTFDC1-207ENST00000477573 IGKV3-20P01619 116 aa8.79□□□□□ -1
RTFDC1-207ENST00000477573 DEFB114Q30KQ6 69 aa8.79□□□□□ -1
RTFDC1-207ENST00000477573 DEFB131AP59861 70 aa8.78□□□□□ -1
RTFDC1-207ENST00000477573 C7orf65Q6ZTY9 151 aa8.78□□□□□ -1
RTFDC1-207ENST00000477573 LCA10Q71F78 164 aa8.78□□□□□ -1
RTFDC1-207ENST00000477573 SMR3AQ99954 134 aa8.78□□□□□ -1
RTFDC1-207ENST00000477573 IGHV3-16A0A0C4DH30 117 aa8.78□□□□□ -1
RTFDC1-207ENST00000477573 A6NN06 94 aa8.78□□□□□ -1
RTFDC1-207ENST00000477573 DIRC1Q969H9 104 aa8.78□□□□□ -1
RTFDC1-207ENST00000477573 SORL1Q92673 2214 aa8.77□□□□□ -1
RTFDC1-207ENST00000477573 SETD2Q9BYW2 2564 aaPredicted RBP8.77□□□□□ -1.01
RTFDC1-207ENST00000477573 C9orf66Q5T8R8 295 aa8.77□□□□□ -1.01
RTFDC1-207ENST00000477573 COX6A2Q02221 97 aa8.76□□□□□ -1.01
RTFDC1-207ENST00000477573 SPINK13Q1W4C9 94 aa8.76□□□□□ -1.01
RTFDC1-207ENST00000477573 LINC00242Q5T6M2 205 aa8.76□□□□□ -1.01
RTFDC1-207ENST00000477573 CYP4F30PQ9H0H9 118 aa8.76□□□□□ -1.01
RTFDC1-207ENST00000477573 C16orf90A8MZG2 172 aa8.75□□□□□ -1.01
RTFDC1-207ENST00000477573 Q5VV11 94 aa8.75□□□□□ -1.01
RTFDC1-207ENST00000477573 A8MTW9 85 aa8.75□□□□□ -1.01
RTFDC1-207ENST00000477573 MAP6D1Q9H9H5 199 aa8.75□□□□□ -1.01
RTFDC1-207ENST00000477573 A8MUN3 132 aa8.74□□□□□ -1.01
RTFDC1-207ENST00000477573 PSCAO43653 123 aa8.74□□□□□ -1.01
RTFDC1-207ENST00000477573 NTM-AS1Q6ZSK4 140 aa8.74□□□□□ -1.01
RTFDC1-207ENST00000477573 WNK1Q9H4A3 2382 aa8.74□□□□□ -1.01
RTFDC1-207ENST00000477573 TRBV6-4A0A1B0GX49 114 aa8.73□□□□□ -1.01
RTFDC1-207ENST00000477573 H3BQ85 93 aa8.73□□□□□ -1.01
RTFDC1-207ENST00000477573 CCL18P55774 89 aa8.73□□□□□ -1.01
RTFDC1-207ENST00000477573 PROK1P58294 105 aa8.73□□□□□ -1.01
RTFDC1-207ENST00000477573 OTOGQ6ZRI0 2925 aa8.73□□□□□ -1.01
RTFDC1-207ENST00000477573 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.73□□□□□ -1.01
RTFDC1-207ENST00000477573 IGHV3OR16-12A0A075B7B8 117 aa8.73□□□□□ -1.01
RTFDC1-207ENST00000477573 TRBV6-8A0A0A6YYG3 113 aa8.73□□□□□ -1.01
RTFDC1-207ENST00000477573 CMC4P56277 68 aaPredicted RBP8.73□□□□□ -1.01
RTFDC1-207ENST00000477573 CUBNO60494 3623 aa8.73□□□□□ -1.01
RTFDC1-207ENST00000477573 LINC00467Q9BRT7 94 aa8.72□□□□□ -1.01
RTFDC1-207ENST00000477573 HIGD2AQ9BW72 106 aa8.72□□□□□ -1.01
RTFDC1-207ENST00000477573 LCE6AA0A183 80 aa8.71□□□□□ -1.01
RTFDC1-207ENST00000477573 LRCOL1A6NCL2 159 aa8.71□□□□□ -1.01
RTFDC1-207ENST00000477573 VPREB1P12018 145 aa8.71□□□□□ -1.01
RTFDC1-207ENST00000477573 INAFM1C9JVW0 142 aa8.71□□□□□ -1.02
RTFDC1-207ENST00000477573 LIMD2Q9BT23 127 aa8.71□□□□□ -1.02
RTFDC1-207ENST00000477573 SETXQ7Z333 2677 aaKnown RBP8.7□□□□□ -1.02
RTFDC1-207ENST00000477573 A8MU10 97 aa8.69□□□□□ -1.02
RTFDC1-207ENST00000477573 HCG22E2RYF7 251 aa8.69□□□□□ -1.02
RTFDC1-207ENST00000477573 PRR26Q8N8Z3 221 aa8.69□□□□□ -1.02
RTFDC1-207ENST00000477573 SPATA3Q8NHX4 192 aa8.69□□□□□ -1.02
RTFDC1-207ENST00000477573 NSD1Q96L73 2696 aaPredicted RBP8.69□□□□□ -1.02
RTFDC1-207ENST00000477573 INSP01308 110 aa8.68□□□□□ -1.02
RTFDC1-207ENST00000477573 ODF3L2Q3SX64 289 aa8.68□□□□□ -1.02
RTFDC1-207ENST00000477573 SPTSSBQ8NFR3 76 aa8.68□□□□□ -1.02
RTFDC1-207ENST00000477573 CHKB-CPT1BH3BT56 60 aa8.68□□□□□ -1.02
RTFDC1-207ENST00000477573 LINC00158P58513 81 aa8.68□□□□□ -1.02
RTFDC1-207ENST00000477573 NKAPP1Q8N9T2 125 aa8.67□□□□□ -1.02
RTFDC1-207ENST00000477573 K7EQD1 137 aa8.66□□□□□ -1.02
RTFDC1-207ENST00000477573 IGLV1-51P01701 117 aa8.66□□□□□ -1.02
RTFDC1-207ENST00000477573 HTN1P15515 57 aa8.66□□□□□ -1.02
RTFDC1-207ENST00000477573 COX7B2Q8TF08 81 aa8.66□□□□□ -1.02
RTFDC1-207ENST00000477573 M0R2N4 97 aa8.65□□□□□ -1.03
RTFDC1-207ENST00000477573 HIVEP1P15822 2718 aa8.64□□□□□ -1.03
RTFDC1-207ENST00000477573 ZCCHC13Q8WW36 166 aaKnown RBP8.64□□□□□ -1.03
RTFDC1-207ENST00000477573 C2CD3Q4AC94 2353 aa8.64□□□□□ -1.03
RTFDC1-207ENST00000477573 IGKV4-1P06312 121 aa8.63□□□□□ -1.03
RTFDC1-207ENST00000477573 Q75L30 129 aa8.63□□□□□ -1.03
RTFDC1-207ENST00000477573 MUC7Q8TAX7 377 aa8.63□□□□□ -1.03
RTFDC1-207ENST00000477573 KRTAP10-3P60369 221 aa8.62□□□□□ -1.03
RTFDC1-207ENST00000477573 SCXQ7RTU7 201 aa8.62□□□□□ -1.03
RTFDC1-207ENST00000477573 CDC42SE1Q9NRR8 79 aa8.62□□□□□ -1.03
RTFDC1-207ENST00000477573 FN1P02751 2386 aaKnown RBP8.61□□□□□ -1.03
RTFDC1-207ENST00000477573 LOC100131303A0A0U1RQF7 123 aa8.61□□□□□ -1.03
RTFDC1-207ENST00000477573 NANOS2P60321 138 aaKnown RBP8.61□□□□□ -1.03
RTFDC1-207ENST00000477573 LINC00575Q6W349 94 aa8.61□□□□□ -1.03
RTFDC1-207ENST00000477573 NDUFB1O75438 58 aa8.6□□□□□ -1.03
RTFDC1-207ENST00000477573 ELOF1P60002 83 aaKnown RBP8.59□□□□□ -1.03
RTFDC1-207ENST00000477573 NIPBLQ6KC79 2804 aaeCLIP8.59□□□□□ -1.03
RTFDC1-207ENST00000477573 Q8N9P0 234 aaPredicted RBP8.59□□□□□ -1.03
RTFDC1-207ENST00000477573 JMJD1CQ15652 2540 aa8.58□□□□□ -1.04
RTFDC1-207ENST00000477573 FLNBO75369 2602 aaKnown RBP8.58□□□□□ -1.04
RTFDC1-207ENST00000477573 IGHV3-53P01767 116 aa8.58□□□□□ -1.04
RTFDC1-207ENST00000477573 C19orf73Q9NVV2 129 aa8.58□□□□□ -1.04
RTFDC1-207ENST00000477573 CDC42SE2Q9NRR3 84 aa8.57□□□□□ -1.04
RTFDC1-207ENST00000477573 IGHV3-73A0A0B4J1V6 119 aa8.56□□□□□ -1.04
RTFDC1-207ENST00000477573 LOC101927531A0A1B0GV80 90 aa8.56□□□□□ -1.04
RTFDC1-207ENST00000477573 PRM2P04554 102 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms