RNA–Protein interactions for RNA: ENST00000476589.1

NLGN3-204, Transcript of neuroligin 3, humanhuman

TSL 1 (best)

Gene NLGN3, Length 3,153 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3-204ENST00000476589 DEFB4AO15263 64 aa9.53□□□□□ -0.88
NLGN3-204ENST00000476589 UNQ6190/PRO20217Q6UXQ8 127 aa9.53□□□□□ -0.88
NLGN3-204ENST00000476589 LINC01006Q8NI28 216 aa9.53□□□□□ -0.88
NLGN3-204ENST00000476589 C10orf25Q5T742 122 aa9.53□□□□□ -0.88
NLGN3-204ENST00000476589 LINC00482Q8N8I6 264 aa9.53□□□□□ -0.88
NLGN3-204ENST00000476589 LOC110117498A0A087WWA1 95 aa9.52□□□□□ -0.89
NLGN3-204ENST00000476589 REG3AQ06141 175 aa9.52□□□□□ -0.89
NLGN3-204ENST00000476589 DEFB113Q30KQ7 82 aa9.52□□□□□ -0.89
NLGN3-204ENST00000476589 C19orf73Q9NVV2 129 aa9.52□□□□□ -0.89
NLGN3-204ENST00000476589 FLNAP21333 2647 aaKnown RBP9.52□□□□□ -0.89
NLGN3-204ENST00000476589 WFDC11Q8NEX6 87 aa9.51□□□□□ -0.89
NLGN3-204ENST00000476589 HIVEP2P31629 2446 aa9.51□□□□□ -0.89
NLGN3-204ENST00000476589 APCP25054 2843 aa9.51□□□□□ -0.89
NLGN3-204ENST00000476589 SPAG11BQ08648 103 aa9.51□□□□□ -0.89
NLGN3-204ENST00000476589 ITPR3Q14573 2671 aa9.51□□□□□ -0.89
NLGN3-204ENST00000476589 LINC00336Q6ZUF6 198 aa9.51□□□□□ -0.89
NLGN3-204ENST00000476589 PRO0255Q9UI72 69 aa9.51□□□□□ -0.89
NLGN3-204ENST00000476589 TM2D3Q9BRN9 247 aa9.5□□□□□ -0.89
NLGN3-204ENST00000476589 NBPF19A0A087WUL8 3843 aa9.5□□□□□ -0.89
NLGN3-204ENST00000476589 IGLV1-51P01701 117 aa9.5□□□□□ -0.89
NLGN3-204ENST00000476589 KLKP1Q107X0 134 aa9.5□□□□□ -0.89
NLGN3-204ENST00000476589 XAGE1AQ9HD64 81 aa9.49□□□□□ -0.89
NLGN3-204ENST00000476589 MUC7Q8TAX7 377 aa9.49□□□□□ -0.89
NLGN3-204ENST00000476589 HTN3P15516 51 aa9.49□□□□□ -0.89
NLGN3-204ENST00000476589 IGHV4-28A0A0C4DH34 117 aa9.47□□□□□ -0.89
NLGN3-204ENST00000476589 C1orf43Q9BWL3 253 aa9.47□□□□□ -0.89
NLGN3-204ENST00000476589 CYSRT1A8MQ03 144 aa9.47□□□□□ -0.89
NLGN3-204ENST00000476589 BCE1O60756 84 aa9.47□□□□□ -0.89
NLGN3-204ENST00000476589 MRAPQ8TCY5 172 aa9.47□□□□□ -0.89
NLGN3-204ENST00000476589 DIRC1Q969H9 104 aa9.46□□□□□ -0.89
NLGN3-204ENST00000476589 CXCL6P80162 114 aa9.46□□□□□ -0.9
NLGN3-204ENST00000476589 LINC00474Q9P2X8 69 aa9.46□□□□□ -0.9
NLGN3-204ENST00000476589 SMIM26A0A096LP01 95 aa9.45□□□□□ -0.9
NLGN3-204ENST00000476589 PDE6GP18545 87 aa9.45□□□□□ -0.9
NLGN3-204ENST00000476589 Q8N9L7 120 aa9.45□□□□□ -0.9
NLGN3-204ENST00000476589 IGLV6-57P01721 117 aa9.44□□□□□ -0.9
NLGN3-204ENST00000476589 NREPQ16612 68 aa9.44□□□□□ -0.9
NLGN3-204ENST00000476589 MIFP14174 115 aa9.44□□□□□ -0.9
NLGN3-204ENST00000476589 FP248Q71RG6 208 aaPredicted RBP9.44□□□□□ -0.9
NLGN3-204ENST00000476589 PRO0628Q9UI54 55 aa9.44□□□□□ -0.9
NLGN3-204ENST00000476589 TRBV7-6A0A0J9YX20 115 aa9.43□□□□□ -0.9
NLGN3-204ENST00000476589 EPM2AB3EWF7 344 aa9.43□□□□□ -0.9
NLGN3-204ENST00000476589 KLK12Q9UKR0 248 aa9.42□□□□□ -0.9
NLGN3-204ENST00000476589 PKIGQ9Y2B9 76 aa9.42□□□□□ -0.9
NLGN3-204ENST00000476589 COX7BP24311 80 aa9.42□□□□□ -0.9
NLGN3-204ENST00000476589 DEFB135Q30KP9 77 aa9.42□□□□□ -0.9
NLGN3-204ENST00000476589 C9orf66Q5T8R8 295 aa9.42□□□□□ -0.9
NLGN3-204ENST00000476589 ZNF469Q96JG9 3925 aaPredicted RBP9.41□□□□□ -0.9
NLGN3-204ENST00000476589 BPY2O14599 106 aa9.41□□□□□ -0.9
NLGN3-204ENST00000476589 ZNF73O43830 326 aaPredicted RBP9.41□□□□□ -0.9
NLGN3-204ENST00000476589 DAD1P61803 113 aa9.4□□□□□ -0.9
NLGN3-204ENST00000476589 LINC00612Q8N6U2 182 aa9.4□□□□□ -0.9
NLGN3-204ENST00000476589 TMEM254Q8TBM7 123 aa9.4□□□□□ -0.9
NLGN3-204ENST00000476589 X6R8D5 127 aa9.4□□□□□ -0.9
NLGN3-204ENST00000476589 TRBV7-4A0A0J9YYF1 115 aa9.4□□□□□ -0.91
NLGN3-204ENST00000476589 MPLKIPQ8TAP9 179 aa9.39□□□□□ -0.91
NLGN3-204ENST00000476589 NDUFC1O43677 76 aa9.39□□□□□ -0.91
NLGN3-204ENST00000476589 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.39□□□□□ -0.91
NLGN3-204ENST00000476589 BRK1Q8WUW1 75 aa9.39□□□□□ -0.91
NLGN3-204ENST00000476589 C16orf95Q9H693 158 aa9.38□□□□□ -0.91
NLGN3-204ENST00000476589 A0A0J9YWU9 116 aa9.37□□□□□ -0.91
NLGN3-204ENST00000476589 H3BQ85 93 aa9.37□□□□□ -0.91
NLGN3-204ENST00000476589 IGHV4-30-4P0DP06 118 aa9.37□□□□□ -0.91
NLGN3-204ENST00000476589 HIGD2BQ4VC39 106 aa9.36□□□□□ -0.91
NLGN3-204ENST00000476589 C6orf48Q9UBA6 75 aa9.36□□□□□ -0.91
NLGN3-204ENST00000476589 C3orf84H3BNL1 204 aa9.36□□□□□ -0.91
NLGN3-204ENST00000476589 A0A0U1RQV1 116 aa9.35□□□□□ -0.91
NLGN3-204ENST00000476589 ATP5EP56381 51 aaPredicted RBP9.34□□□□□ -0.91
NLGN3-204ENST00000476589 ELOF1P60002 83 aaKnown RBP9.34□□□□□ -0.91
NLGN3-204ENST00000476589 LYRM9A8MSI8 78 aa9.33□□□□□ -0.92
NLGN3-204ENST00000476589 KRTAP1-3Q8IUG1 177 aa9.33□□□□□ -0.92
NLGN3-204ENST00000476589 DEFB105AQ8NG35 78 aa9.33□□□□□ -0.92
NLGN3-204ENST00000476589 FAM229BQ4G0N7 80 aa9.32□□□□□ -0.92
NLGN3-204ENST00000476589 PRYO14603 147 aa9.32□□□□□ -0.92
NLGN3-204ENST00000476589 CAMK2N2Q96S95 79 aa9.32□□□□□ -0.92
NLGN3-204ENST00000476589 CELA1Q9UNI1 258 aa9.32□□□□□ -0.92
NLGN3-204ENST00000476589 FUSP35637 526 aaKnown RBP eCLIP9.31□□□□□ -0.92
NLGN3-204ENST00000476589 IGKV4-1P06312 121 aa9.3□□□□□ -0.92
NLGN3-204ENST00000476589 NOTCH2Q04721 2471 aa9.3□□□□□ -0.92
NLGN3-204ENST00000476589 LELP1Q5T871 98 aa9.3□□□□□ -0.92
NLGN3-204ENST00000476589 HIGD2AQ9BW72 106 aa9.3□□□□□ -0.92
NLGN3-204ENST00000476589 VPREB1P12018 145 aa9.28□□□□□ -0.92
NLGN3-204ENST00000476589 USP24Q9UPU5 2620 aa9.28□□□□□ -0.92
NLGN3-204ENST00000476589 GVQW2A0A096LPI5 108 aaPredicted RBP9.27□□□□□ -0.93
NLGN3-204ENST00000476589 M0R378 163 aa9.27□□□□□ -0.93
NLGN3-204ENST00000476589 OCR1Q9BZK8 76 aa9.26□□□□□ -0.93
NLGN3-204ENST00000476589 FAM30AQ9NZY2 134 aa9.26□□□□□ -0.93
NLGN3-204ENST00000476589 UNC79Q9P2D8 2635 aa9.26□□□□□ -0.93
NLGN3-204ENST00000476589 LINC00528Q8N1L1 170 aa9.26□□□□□ -0.93
NLGN3-204ENST00000476589 PRR34Q9NV39 138 aa9.26□□□□□ -0.93
NLGN3-204ENST00000476589 LRCOL1A6NCL2 159 aa9.25□□□□□ -0.93
NLGN3-204ENST00000476589 ERC2-IT1O76042 136 aa9.25□□□□□ -0.93
NLGN3-204ENST00000476589 ESRGQ1W209 222 aa9.25□□□□□ -0.93
NLGN3-204ENST00000476589 Q6ZRU5 148 aa9.25□□□□□ -0.93
NLGN3-204ENST00000476589 SPART-AS1P0CW21 52 aa9.24□□□□□ -0.93
NLGN3-204ENST00000476589 APOC4P55056 127 aa9.24□□□□□ -0.93
NLGN3-204ENST00000476589 VWFP04275 2813 aa9.23□□□□□ -0.93
NLGN3-204ENST00000476589 SMIM29Q86T20 159 aa9.23□□□□□ -0.93
NLGN3-204ENST00000476589 KRTAP10-3P60369 221 aa9.22□□□□□ -0.93
NLGN3-204ENST00000476589 UBR5O95071 2799 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms