RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 MSRB1Q9NZV6 116 aa7.79□□□□□ -1.16
HLA-DOB-208ENST00000475235 KLKP1Q107X0 134 aa7.78□□□□□ -1.16
HLA-DOB-208ENST00000475235 LINC01556Q5JQF7 62 aa7.78□□□□□ -1.16
HLA-DOB-208ENST00000475235 A0A0A0MQY5 61 aa7.78□□□□□ -1.16
HLA-DOB-208ENST00000475235 TEX49A0A1B0GTD5 131 aa7.78□□□□□ -1.16
HLA-DOB-208ENST00000475235 H7BZZ5 65 aa7.78□□□□□ -1.16
HLA-DOB-208ENST00000475235 M0R381 172 aa7.78□□□□□ -1.16
HLA-DOB-208ENST00000475235 CKS2P33552 79 aa7.78□□□□□ -1.16
HLA-DOB-208ENST00000475235 FAM74A4Q5TZK3 123 aa7.78□□□□□ -1.16
HLA-DOB-208ENST00000475235 Q6JHZ5 121 aa7.77□□□□□ -1.17
HLA-DOB-208ENST00000475235 Q6ZSN1 163 aa7.77□□□□□ -1.17
HLA-DOB-208ENST00000475235 RYR1P21817 5038 aa7.76□□□□□ -1.17
HLA-DOB-208ENST00000475235 LRP1BQ9NZR2 4599 aa7.76□□□□□ -1.17
HLA-DOB-208ENST00000475235 CDK2AP2O75956 126 aa7.76□□□□□ -1.17
HLA-DOB-208ENST00000475235 UBE2BP63146 152 aa7.76□□□□□ -1.17
HLA-DOB-208ENST00000475235 SS18Q15532 418 aa7.76□□□□□ -1.17
HLA-DOB-208ENST00000475235 C2orf82Q6UX34 121 aa7.76□□□□□ -1.17
HLA-DOB-208ENST00000475235 TRBV10-1A0A0K0K1A3 114 aa7.75□□□□□ -1.17
HLA-DOB-208ENST00000475235 XCL1P47992 114 aa7.75□□□□□ -1.17
HLA-DOB-208ENST00000475235 C14orf178Q8N769 122 aaPredicted RBP7.75□□□□□ -1.17
HLA-DOB-208ENST00000475235 PRO1854Q9UHT4 67 aa7.75□□□□□ -1.17
HLA-DOB-208ENST00000475235 TRAV13-2A0A0B4J235 113 aa7.74□□□□□ -1.17
HLA-DOB-208ENST00000475235 KRTAP10-2P60368 255 aa7.74□□□□□ -1.17
HLA-DOB-208ENST00000475235 A0A087WTM6 91 aa7.73□□□□□ -1.17
HLA-DOB-208ENST00000475235 TRBV30A0A0K0K1B3 111 aa7.73□□□□□ -1.17
HLA-DOB-208ENST00000475235 LINC01546A6NGU7 62 aa7.73□□□□□ -1.17
HLA-DOB-208ENST00000475235 TMEM256-PLSCR3K7ERE1 68 aa7.73□□□□□ -1.17
HLA-DOB-208ENST00000475235 RPL36AP83881 106 aaKnown RBP7.73□□□□□ -1.17
HLA-DOB-208ENST00000475235 SPANXN1Q5VSR9 72 aa7.73□□□□□ -1.17
HLA-DOB-208ENST00000475235 PRSS3P2Q8NHM4 247 aa7.73□□□□□ -1.17
HLA-DOB-208ENST00000475235 RPL36ALQ969Q0 106 aaKnown RBP7.73□□□□□ -1.17
HLA-DOB-208ENST00000475235 TIMM17AQ99595 171 aa7.73□□□□□ -1.17
HLA-DOB-208ENST00000475235 IGKV2D-26A0A0A0MRZ7 120 aa7.73□□□□□ -1.17
HLA-DOB-208ENST00000475235 PSCAO43653 123 aa7.73□□□□□ -1.17
HLA-DOB-208ENST00000475235 IGHV3-30P01768 117 aa7.73□□□□□ -1.17
HLA-DOB-208ENST00000475235 IGHV3-33P01772 117 aa7.73□□□□□ -1.17
HLA-DOB-208ENST00000475235 IGHV3-30-3P0DP02 117 aa7.73□□□□□ -1.17
HLA-DOB-208ENST00000475235 IGHV3-30-5P0DP03 117 aa7.73□□□□□ -1.17
HLA-DOB-208ENST00000475235 Q1T7F1 81 aa7.73□□□□□ -1.17
HLA-DOB-208ENST00000475235 DNAH5Q8TE73 4624 aa7.72□□□□□ -1.17
HLA-DOB-208ENST00000475235 A8MUN3 132 aa7.72□□□□□ -1.17
HLA-DOB-208ENST00000475235 LST1O00453 97 aa7.72□□□□□ -1.17
HLA-DOB-208ENST00000475235 FCER1GP30273 86 aa7.72□□□□□ -1.17
HLA-DOB-208ENST00000475235 PAPPA-AS1Q5QFB9 102 aa7.72□□□□□ -1.17
HLA-DOB-208ENST00000475235 IGLV2-8P01709 118 aa7.71□□□□□ -1.18
HLA-DOB-208ENST00000475235 PLNP26678 52 aa7.71□□□□□ -1.18
HLA-DOB-208ENST00000475235 CXCL6P80162 114 aa7.71□□□□□ -1.18
HLA-DOB-208ENST00000475235 RBM3P98179 157 aaKnown RBP7.71□□□□□ -1.18
HLA-DOB-208ENST00000475235 OPRPNQ99935 248 aaPredicted RBP7.71□□□□□ -1.18
HLA-DOB-208ENST00000475235 MRPL35Q9NZE8 188 aaKnown RBP7.71□□□□□ -1.18
HLA-DOB-208ENST00000475235 PCLOQ9Y6V0 5065 aa7.71□□□□□ -1.18
HLA-DOB-208ENST00000475235 TRAV8-3A0A0A6YYJ7 113 aa7.7□□□□□ -1.18
HLA-DOB-208ENST00000475235 ATP5EP2Q5VTU8 51 aa7.7□□□□□ -1.18
HLA-DOB-208ENST00000475235 Q9HAA7 133 aa7.7□□□□□ -1.18
HLA-DOB-208ENST00000475235 HSPG2P98160 4391 aa7.69□□□□□ -1.18
HLA-DOB-208ENST00000475235 A0A096LNJ9 63 aa7.69□□□□□ -1.18
HLA-DOB-208ENST00000475235 INAFM2P0DMQ5 153 aa7.69□□□□□ -1.18
HLA-DOB-208ENST00000475235 ZNF22P17026 224 aaPredicted RBP7.69□□□□□ -1.18
HLA-DOB-208ENST00000475235 CHCHD7Q9BUK0 85 aa7.69□□□□□ -1.18
HLA-DOB-208ENST00000475235 APOBP04114 4563 aaKnown RBP7.69□□□□□ -1.18
HLA-DOB-208ENST00000475235 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.68□□□□□ -1.18
HLA-DOB-208ENST00000475235 HIGD1CA8MV81 97 aa7.68□□□□□ -1.18
HLA-DOB-208ENST00000475235 F5H697 171 aa7.68□□□□□ -1.18
HLA-DOB-208ENST00000475235 TRAV7A0A075B6U4 112 aa7.68□□□□□ -1.18
HLA-DOB-208ENST00000475235 COX6CP09669 75 aa7.68□□□□□ -1.18
HLA-DOB-208ENST00000475235 CFC1BP0CG36 223 aa7.68□□□□□ -1.18
HLA-DOB-208ENST00000475235 CFC1P0CG37 223 aa7.68□□□□□ -1.18
HLA-DOB-208ENST00000475235 C7orf65Q6ZTY9 151 aa7.68□□□□□ -1.18
HLA-DOB-208ENST00000475235 MAPKAPK5-AS1Q8N8E1 139 aa7.68□□□□□ -1.18
HLA-DOB-208ENST00000475235 TRBV10-3A0A0K0K1G6 114 aa7.67□□□□□ -1.18
HLA-DOB-208ENST00000475235 LRCOL1A6NCL2 159 aa7.67□□□□□ -1.18
HLA-DOB-208ENST00000475235 H0Y9J4 135 aa7.67□□□□□ -1.18
HLA-DOB-208ENST00000475235 KIAA0087Q14695 138 aa7.67□□□□□ -1.18
HLA-DOB-208ENST00000475235 ATP11AUNQ6ZP68 121 aa7.67□□□□□ -1.18
HLA-DOB-208ENST00000475235 SMCR5Q8TEV8 140 aa7.67□□□□□ -1.18
HLA-DOB-208ENST00000475235 DIRC1Q969H9 104 aa7.67□□□□□ -1.18
HLA-DOB-208ENST00000475235 RMI2Q96E14 147 aa7.67□□□□□ -1.18
HLA-DOB-208ENST00000475235 LINC00474Q9P2X8 69 aa7.67□□□□□ -1.18
HLA-DOB-208ENST00000475235 KIF25-AS1Q9Y6Z4 181 aa7.67□□□□□ -1.18
HLA-DOB-208ENST00000475235 TRBV6-8A0A0A6YYG3 113 aa7.66□□□□□ -1.18
HLA-DOB-208ENST00000475235 H7C423 109 aa7.66□□□□□ -1.18
HLA-DOB-208ENST00000475235 MP68P56378 58 aa7.66□□□□□ -1.18
HLA-DOB-208ENST00000475235 Q8N3U1 123 aa7.66□□□□□ -1.18
HLA-DOB-208ENST00000475235 NKAPP1Q8N9T2 125 aa7.66□□□□□ -1.18
HLA-DOB-208ENST00000475235 FAM30AQ9NZY2 134 aa7.66□□□□□ -1.18
HLA-DOB-208ENST00000475235 RIGQ13278 110 aa7.65□□□□□ -1.18
HLA-DOB-208ENST00000475235 S100A7L2Q5SY68 101 aa7.65□□□□□ -1.18
HLA-DOB-208ENST00000475235 Q8N814 137 aa7.65□□□□□ -1.18
HLA-DOB-208ENST00000475235 KRTAP17-1Q9BYP8 105 aa7.65□□□□□ -1.18
HLA-DOB-208ENST00000475235 IGLV5-52A0A0A0MRZ9 124 aa7.64□□□□□ -1.19
HLA-DOB-208ENST00000475235 IGHV3OR16-9A0A0B4J2B5 98 aa7.64□□□□□ -1.19
HLA-DOB-208ENST00000475235 COX7A2LO14548 114 aa7.64□□□□□ -1.19
HLA-DOB-208ENST00000475235 MGPP08493 103 aa7.64□□□□□ -1.19
HLA-DOB-208ENST00000475235 FUSP35637 526 aaKnown RBP eCLIP7.64□□□□□ -1.19
HLA-DOB-208ENST00000475235 MRPL51Q4U2R6 128 aaKnown RBP7.64□□□□□ -1.19
HLA-DOB-208ENST00000475235 LYZL1Q6UWQ5 148 aa7.64□□□□□ -1.19
HLA-DOB-208ENST00000475235 Q8N1X5 172 aa7.64□□□□□ -1.19
HLA-DOB-208ENST00000475235 RPP21Q9H633 154 aaKnown RBP7.64□□□□□ -1.19
HLA-DOB-208ENST00000475235 KLK12Q9UKR0 248 aa7.64□□□□□ -1.19
HLA-DOB-208ENST00000475235 ABCA13Q86UQ4 5058 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms