RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 UBE2AP49459 152 aa8.99□□□□□ -0.97
VTI1A-203ENST00000472892 BAGE3Q86Y29 109 aa8.99□□□□□ -0.97
VTI1A-203ENST00000472892 TYMSOSQ8TAI1 123 aa8.99□□□□□ -0.97
VTI1A-203ENST00000472892 IGKV2-28A0A075B6P5 120 aa8.98□□□□□ -0.97
VTI1A-203ENST00000472892 C11orf86A6NJI1 115 aa8.98□□□□□ -0.97
VTI1A-203ENST00000472892 IGKV2D-28P01615 120 aa8.98□□□□□ -0.97
VTI1A-203ENST00000472892 LCE3BQ5TA77 95 aa8.98□□□□□ -0.97
VTI1A-203ENST00000472892 ANAPC11Q9NYG5 84 aa8.98□□□□□ -0.97
VTI1A-203ENST00000472892 RPL24P83731 157 aaKnown RBP8.97□□□□□ -0.97
VTI1A-203ENST00000472892 SFTA2Q6UW10 78 aa8.97□□□□□ -0.97
VTI1A-203ENST00000472892 APOC3P02656 99 aa8.96□□□□□ -0.98
VTI1A-203ENST00000472892 FAM229BQ4G0N7 80 aa8.96□□□□□ -0.98
VTI1A-203ENST00000472892 KRTAP13-2Q52LG2 175 aa8.96□□□□□ -0.98
VTI1A-203ENST00000472892 TMEM170BQ5T4T1 132 aa8.96□□□□□ -0.98
VTI1A-203ENST00000472892 ZNF625Q96I27 306 aaPredicted RBP8.96□□□□□ -0.98
VTI1A-203ENST00000472892 TMEM126AQ9H061 195 aa8.95□□□□□ -0.98
VTI1A-203ENST00000472892 MUC2Q02817 5179 aa8.95□□□□□ -0.98
VTI1A-203ENST00000472892 TMEM238C9JI98 176 aa8.94□□□□□ -0.98
VTI1A-203ENST00000472892 SNAPINO95295 136 aa8.94□□□□□ -0.98
VTI1A-203ENST00000472892 SVBPQ8N300 66 aa8.94□□□□□ -0.98
VTI1A-203ENST00000472892 Q8NDZ9 215 aa8.94□□□□□ -0.98
VTI1A-203ENST00000472892 CHTOPQ9Y3Y2 248 aaKnown RBP8.94□□□□□ -0.98
VTI1A-203ENST00000472892 M0R378 163 aa8.93□□□□□ -0.98
VTI1A-203ENST00000472892 PRLHP81277 87 aa8.93□□□□□ -0.98
VTI1A-203ENST00000472892 FAM19A1Q7Z5A9 133 aa8.93□□□□□ -0.98
VTI1A-203ENST00000472892 CHCHD1Q96BP2 118 aaKnown RBP8.92□□□□□ -0.98
VTI1A-203ENST00000472892 YPEL4Q96NS1 127 aa8.92□□□□□ -0.98
VTI1A-203ENST00000472892 TRAV12-1A0A0B4J245 112 aa8.91□□□□□ -0.98
VTI1A-203ENST00000472892 TMEM223A0PJW6 202 aa8.91□□□□□ -0.98
VTI1A-203ENST00000472892 NDUFA5Q16718 116 aa8.91□□□□□ -0.98
VTI1A-203ENST00000472892 KRTAP19-1Q8IUB9 90 aa8.91□□□□□ -0.98
VTI1A-203ENST00000472892 LINC00158P58513 81 aa8.9□□□□□ -0.98
VTI1A-203ENST00000472892 IFI27L1Q96BM0 104 aa8.9□□□□□ -0.98
VTI1A-203ENST00000472892 IGKV2D-26A0A0A0MRZ7 120 aa8.89□□□□□ -0.99
VTI1A-203ENST00000472892 H3BS24 57 aa8.89□□□□□ -0.99
VTI1A-203ENST00000472892 LINC00304Q8N9R0 145 aa8.89□□□□□ -0.99
VTI1A-203ENST00000472892 PLEKHB2Q96CS7 222 aa8.89□□□□□ -0.99
VTI1A-203ENST00000472892 CTAG1AP78358 180 aa8.87□□□□□ -0.99
VTI1A-203ENST00000472892 CBLN2Q8IUK8 224 aa8.87□□□□□ -0.99
VTI1A-203ENST00000472892 A0A0U1RRA0 63 aa8.86□□□□□ -0.99
VTI1A-203ENST00000472892 SMIM13P0DJ93 91 aa8.85□□□□□ -0.99
VTI1A-203ENST00000472892 ATP6V1G1O75348 118 aa8.83□□□□□ -1
VTI1A-203ENST00000472892 HERV-K104P63124 156 aa8.83□□□□□ -1
VTI1A-203ENST00000472892 FAM19A2Q8N3H0 131 aa8.83□□□□□ -1
VTI1A-203ENST00000472892 RETNLBQ9BQ08 111 aa8.83□□□□□ -1
VTI1A-203ENST00000472892 HIGD2AQ9BW72 106 aa8.83□□□□□ -1
VTI1A-203ENST00000472892 HSBP1O75506 76 aa8.82□□□□□ -1
VTI1A-203ENST00000472892 BOD1L2Q8IYS8 172 aa8.82□□□□□ -1
VTI1A-203ENST00000472892 C3orf22Q8N5N4 141 aa8.82□□□□□ -1
VTI1A-203ENST00000472892 SPRR4Q96PI1 79 aa8.82□□□□□ -1
VTI1A-203ENST00000472892 LINC00587B1AMM8 73 aa8.81□□□□□ -1
VTI1A-203ENST00000472892 SPRR1AP35321 89 aa8.81□□□□□ -1
VTI1A-203ENST00000472892 MEIG1Q5JSS6 88 aa8.81□□□□□ -1
VTI1A-203ENST00000472892 MIR7-3HGQ8N6C7 128 aa8.81□□□□□ -1
VTI1A-203ENST00000472892 KCNQ1DNQ9H478 68 aa8.81□□□□□ -1
VTI1A-203ENST00000472892 PRYO14603 147 aa8.8□□□□□ -1
VTI1A-203ENST00000472892 LINC00337Q8N6G1 96 aa8.8□□□□□ -1
VTI1A-203ENST00000472892 NDUFA12Q9UI09 145 aa8.8□□□□□ -1
VTI1A-203ENST00000472892 MYMXA0A1B0GTQ4 84 aa8.79□□□□□ -1
VTI1A-203ENST00000472892 IGLV7-46A0A075B6I9 117 aa8.78□□□□□ -1
VTI1A-203ENST00000472892 KRTAP4-16G5E9R7 235 aaPredicted RBP8.78□□□□□ -1
VTI1A-203ENST00000472892 NCR3O14931 201 aa8.78□□□□□ -1
VTI1A-203ENST00000472892 TRGC2P03986 189 aa8.78□□□□□ -1
VTI1A-203ENST00000472892 TPRXLQ17RH7 258 aa8.78□□□□□ -1
VTI1A-203ENST00000472892 SPAG11AQ6PDA7 123 aa8.78□□□□□ -1
VTI1A-203ENST00000472892 MAP1LC3CQ9BXW4 147 aa8.78□□□□□ -1
VTI1A-203ENST00000472892 ZNF706Q9Y5V0 76 aaPredicted RBP8.78□□□□□ -1
VTI1A-203ENST00000472892 LOC107984156A0A0G2JMH3 177 aa8.77□□□□□ -1.01
VTI1A-203ENST00000472892 A0A0U1RQV1 116 aa8.77□□□□□ -1.01
VTI1A-203ENST00000472892 LEPROTL1O95214 131 aa8.77□□□□□ -1.01
VTI1A-203ENST00000472892 LINC00310P59036 64 aa8.77□□□□□ -1.01
VTI1A-203ENST00000472892 ARL17AQ8IVW1 177 aa8.77□□□□□ -1.01
VTI1A-203ENST00000472892 KRTAP9-9Q9BYP9 154 aa8.77□□□□□ -1.01
VTI1A-203ENST00000472892 KRTAP9-4Q9BYQ2 154 aa8.77□□□□□ -1.01
VTI1A-203ENST00000472892 TRBV10-3A0A0K0K1G6 114 aa8.76□□□□□ -1.01
VTI1A-203ENST00000472892 H0Y8G0 127 aa8.76□□□□□ -1.01
VTI1A-203ENST00000472892 LEPROTO15243 131 aa8.76□□□□□ -1.01
VTI1A-203ENST00000472892 SMCR5Q8TEV8 140 aa8.76□□□□□ -1.01
VTI1A-203ENST00000472892 TSPEAR-AS2P59090 65 aa8.75□□□□□ -1.01
VTI1A-203ENST00000472892 CDIP1Q9H305 208 aa8.75□□□□□ -1.01
VTI1A-203ENST00000472892 ETDCA0A1B0GVM5 59 aa8.74□□□□□ -1.01
VTI1A-203ENST00000472892 SERF1AO75920 110 aa8.74□□□□□ -1.01
VTI1A-203ENST00000472892 PLNP26678 52 aa8.74□□□□□ -1.01
VTI1A-203ENST00000472892 PPDPFQ9H3Y8 114 aa8.73□□□□□ -1.01
VTI1A-203ENST00000472892 MUC17Q685J3 4493 aa8.73□□□□□ -1.01
VTI1A-203ENST00000472892 TRBV10-2A0A0K0K1G8 114 aa8.72□□□□□ -1.01
VTI1A-203ENST00000472892 J3QQQ9 107 aa8.72□□□□□ -1.01
VTI1A-203ENST00000472892 S100A12P80511 92 aa8.72□□□□□ -1.01
VTI1A-203ENST00000472892 LINC00483Q53H64 154 aa8.72□□□□□ -1.01
VTI1A-203ENST00000472892 DAND5Q8N907 189 aa8.72□□□□□ -1.01
VTI1A-203ENST00000472892 HSPB8Q9UJY1 196 aa8.72□□□□□ -1.01
VTI1A-203ENST00000472892 FAT4Q6V0I7 4981 aa8.71□□□□□ -1.01
VTI1A-203ENST00000472892 B5MCH6 92 aa8.71□□□□□ -1.02
VTI1A-203ENST00000472892 DPM2O94777 84 aa8.71□□□□□ -1.02
VTI1A-203ENST00000472892 Q8NBF4 154 aa8.71□□□□□ -1.02
VTI1A-203ENST00000472892 FABP4P15090 132 aa8.7□□□□□ -1.02
VTI1A-203ENST00000472892 DDTP30046 118 aa8.7□□□□□ -1.02
VTI1A-203ENST00000472892 NMUP48645 174 aa8.7□□□□□ -1.02
VTI1A-203ENST00000472892 FP248Q71RG6 208 aaPredicted RBP8.7□□□□□ -1.02
VTI1A-203ENST00000472892 HERVK_113P61574 105 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms