RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 MUC4Q99102 2169 aa3.32□□□□□ -1.88
COL3A1-205ENST00000470167 FBN1P35555 2871 aaKnown RBP3.31□□□□□ -1.88
COL3A1-205ENST00000470167 NBEAL2Q6ZNJ1 2754 aa3.31□□□□□ -1.88
COL3A1-205ENST00000470167 IGLV10-54A0A075B6I4 117 aa3.31□□□□□ -1.88
COL3A1-205ENST00000470167 IGLV1-50A0A075B6I6 118 aa3.31□□□□□ -1.88
COL3A1-205ENST00000470167 RPL37AP8A6NKH3 93 aa3.31□□□□□ -1.88
COL3A1-205ENST00000470167 NDUFA4O00483 81 aa3.31□□□□□ -1.88
COL3A1-205ENST00000470167 POLR2KP53803 58 aaKnown RBP3.31□□□□□ -1.88
COL3A1-205ENST00000470167 Q8TAT8 98 aa3.31□□□□□ -1.88
COL3A1-205ENST00000470167 C7orf33Q8WU49 177 aa3.31□□□□□ -1.88
COL3A1-205ENST00000470167 CHCHD7Q9BUK0 85 aa3.31□□□□□ -1.88
COL3A1-205ENST00000470167 WFDC10AQ9H1F0 79 aa3.31□□□□□ -1.88
COL3A1-205ENST00000470167 FAM215AQ9Y5M1 114 aa3.31□□□□□ -1.88
COL3A1-205ENST00000470167 COL12A1Q99715 3063 aa3.31□□□□□ -1.88
COL3A1-205ENST00000470167 ARFGEF3Q5TH69 2177 aa3.31□□□□□ -1.88
COL3A1-205ENST00000470167 OTOGLQ3ZCN5 2332 aa3.3□□□□□ -1.88
COL3A1-205ENST00000470167 FREM2Q5SZK8 3169 aa3.3□□□□□ -1.88
COL3A1-205ENST00000470167 IGLV5-37A0A075B6J1 123 aa3.3□□□□□ -1.88
COL3A1-205ENST00000470167 H0Y9P7 68 aa3.3□□□□□ -1.88
COL3A1-205ENST00000470167 DNAH10OSP0CZ25 163 aa3.3□□□□□ -1.88
COL3A1-205ENST00000470167 Q6ZTI0 123 aa3.3□□□□□ -1.88
COL3A1-205ENST00000470167 KCNQ1DNQ9H478 68 aa3.3□□□□□ -1.88
COL3A1-205ENST00000470167 ADAMTS9Q9P2N4 1935 aa3.3□□□□□ -1.88
COL3A1-205ENST00000470167 CCDC168Q8NDH2 2452 aa3.3□□□□□ -1.88
COL3A1-205ENST00000470167 PKD1L1Q8TDX9 2849 aa3.29□□□□□ -1.88
COL3A1-205ENST00000470167 IGLV4-60A0A075B6I1 120 aa3.29□□□□□ -1.88
COL3A1-205ENST00000470167 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.29□□□□□ -1.88
COL3A1-205ENST00000470167 TRGV2A0A075B6R0 118 aa3.29□□□□□ -1.88
COL3A1-205ENST00000470167 IGHV1-3A0A0C4DH29 117 aa3.29□□□□□ -1.88
COL3A1-205ENST00000470167 ETDCA0A1B0GVM5 59 aa3.29□□□□□ -1.88
COL3A1-205ENST00000470167 IGHV1-8P0DP01 117 aa3.29□□□□□ -1.88
COL3A1-205ENST00000470167 KRTAP25-1Q3LHN0 102 aa3.29□□□□□ -1.88
COL3A1-205ENST00000470167 C1orf137Q5JT78 98 aa3.29□□□□□ -1.88
COL3A1-205ENST00000470167 KRTAP26-1Q6PEX3 210 aa3.29□□□□□ -1.88
COL3A1-205ENST00000470167 SPATA8Q6RVD6 105 aa3.29□□□□□ -1.88
COL3A1-205ENST00000470167 NTM-AS1Q6ZSK4 140 aa3.29□□□□□ -1.88
COL3A1-205ENST00000470167 SMIM11BQ8TCY0 68 aa3.29□□□□□ -1.88
COL3A1-205ENST00000470167 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.28□□□□□ -1.88
COL3A1-205ENST00000470167 A6NDX4 124 aa3.28□□□□□ -1.88
COL3A1-205ENST00000470167 C9orf47Q6ZRZ4 202 aa3.28□□□□□ -1.88
COL3A1-205ENST00000470167 Q8N9W7 124 aa3.28□□□□□ -1.88
COL3A1-205ENST00000470167 PRRC2BQ5JSZ5 2229 aaKnown RBP3.27□□□□□ -1.89
COL3A1-205ENST00000470167 FREM1Q5H8C1 2179 aa3.27□□□□□ -1.89
COL3A1-205ENST00000470167 IGLV4-3A0A075B6K6 122 aa3.27□□□□□ -1.89
COL3A1-205ENST00000470167 IGHV4-30-2A0A087WSY4 118 aa3.27□□□□□ -1.89
COL3A1-205ENST00000470167 IGHV3-66A0A0C4DH42 116 aa3.27□□□□□ -1.89
COL3A1-205ENST00000470167 H3BRN7 92 aa3.27□□□□□ -1.89
COL3A1-205ENST00000470167 SMIM29Q86T20 159 aa3.27□□□□□ -1.89
COL3A1-205ENST00000470167 COA5Q86WW8 74 aa3.27□□□□□ -1.89
COL3A1-205ENST00000470167 SPRR4Q96PI1 79 aa3.27□□□□□ -1.89
COL3A1-205ENST00000470167 GAFA1Q96PS6 74 aa3.27□□□□□ -1.89
COL3A1-205ENST00000470167 PDZD2O15018 2839 aa3.27□□□□□ -1.89
COL3A1-205ENST00000470167 MTORP42345 2549 aa3.27□□□□□ -1.89
COL3A1-205ENST00000470167 CHD7Q9P2D1 2997 aa3.27□□□□□ -1.89
COL3A1-205ENST00000470167 IGLV8-61A0A075B6I0 122 aa3.26□□□□□ -1.89
COL3A1-205ENST00000470167 IGKV3D-11A0A0A0MRZ8 115 aa3.26□□□□□ -1.89
COL3A1-205ENST00000470167 LINC00959A0A1B0GUT2 108 aa3.26□□□□□ -1.89
COL3A1-205ENST00000470167 ODF3BA8MYP8 253 aa3.26□□□□□ -1.89
COL3A1-205ENST00000470167 IGHV1-46P01743 117 aa3.26□□□□□ -1.89
COL3A1-205ENST00000470167 IGKV2-30P06310 120 aa3.26□□□□□ -1.89
COL3A1-205ENST00000470167 CCL18P55774 89 aa3.26□□□□□ -1.89
COL3A1-205ENST00000470167 ERHP84090 104 aaKnown RBP3.26□□□□□ -1.89
COL3A1-205ENST00000470167 LINC00612Q8N6U2 182 aa3.26□□□□□ -1.89
COL3A1-205ENST00000470167 RPL39LQ96EH5 51 aaKnown RBP3.26□□□□□ -1.89
COL3A1-205ENST00000470167 DEC1Q9P2X7 70 aa3.26□□□□□ -1.89
COL3A1-205ENST00000470167 DOPEY2Q9Y3R5 2298 aa3.26□□□□□ -1.89
COL3A1-205ENST00000470167 TECTAO75443 2155 aa3.25□□□□□ -1.89
COL3A1-205ENST00000470167 IGKV2-28A0A075B6P5 120 aa3.25□□□□□ -1.89
COL3A1-205ENST00000470167 IGHV3-64A0A075B6Q5 118 aa3.25□□□□□ -1.89
COL3A1-205ENST00000470167 IGHV3-64DA0A0J9YX35 117 aa3.25□□□□□ -1.89
COL3A1-205ENST00000470167 A0A1B0GVX0 72 aa3.25□□□□□ -1.89
COL3A1-205ENST00000470167 IGKV2D-28P01615 120 aa3.25□□□□□ -1.89
COL3A1-205ENST00000470167 IGKV3-20P01619 116 aa3.25□□□□□ -1.89
COL3A1-205ENST00000470167 DEFB113Q30KQ7 82 aa3.25□□□□□ -1.89
COL3A1-205ENST00000470167 SPINK14Q6IE38 97 aa3.25□□□□□ -1.89
COL3A1-205ENST00000470167 TMEM105Q8N8V8 129 aa3.25□□□□□ -1.89
COL3A1-205ENST00000470167 DMAC1Q96GE9 116 aa3.25□□□□□ -1.89
COL3A1-205ENST00000470167 FLNAP21333 2647 aaKnown RBP3.24□□□□□ -1.89
COL3A1-205ENST00000470167 BRWD1Q9NSI6 2320 aa3.24□□□□□ -1.89
COL3A1-205ENST00000470167 IGLV7-46A0A075B6I9 117 aa3.24□□□□□ -1.89
COL3A1-205ENST00000470167 TRGV4A0A0C4DH28 118 aa3.24□□□□□ -1.89
COL3A1-205ENST00000470167 PLA2G2AP14555 144 aa3.24□□□□□ -1.89
COL3A1-205ENST00000470167 RPL39P62891 51 aaKnown RBP3.24□□□□□ -1.89
COL3A1-205ENST00000470167 CAMK2N1Q7Z7J9 78 aa3.24□□□□□ -1.89
COL3A1-205ENST00000470167 C9orf163Q8N9P6 203 aa3.24□□□□□ -1.89
COL3A1-205ENST00000470167 LINC01006Q8NI28 216 aa3.24□□□□□ -1.89
COL3A1-205ENST00000470167 CIRBP-AS1Q8TBR5 109 aa3.24□□□□□ -1.89
COL3A1-205ENST00000470167 DEFB126Q9BYW3 111 aa3.24□□□□□ -1.89
COL3A1-205ENST00000470167 DHRS4-AS1Q9P1J3 65 aa3.24□□□□□ -1.89
COL3A1-205ENST00000470167 BOD1L1Q8NFC6 3051 aa3.24□□□□□ -1.89
COL3A1-205ENST00000470167 IGLV11-55A0A075B6I3 123 aa3.23□□□□□ -1.89
COL3A1-205ENST00000470167 NUPR2A6NF83 97 aa3.23□□□□□ -1.89
COL3A1-205ENST00000470167 ZNF861PO60384 105 aa3.23□□□□□ -1.89
COL3A1-205ENST00000470167 TET2Q6N021 2002 aaPredicted RBP3.23□□□□□ -1.89
COL3A1-205ENST00000470167 C15orf56Q8N910 161 aa3.23□□□□□ -1.89
COL3A1-205ENST00000470167 CHD9Q3L8U1 2897 aa3.23□□□□□ -1.89
COL3A1-205ENST00000470167 ZGRF1Q86YA3 2104 aa3.23□□□□□ -1.89
COL3A1-205ENST00000470167 CACNA1CQ13936 2221 aa3.23□□□□□ -1.89
COL3A1-205ENST00000470167 DMXL2Q8TDJ6 3036 aa3.22□□□□□ -1.89
COL3A1-205ENST00000470167 M0R2N4 97 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms