RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 SPANXDQ9BXN6 97 aa8.83□□□□□ -1
LINC00173-201ENST00000470091 SPANXCQ9NY87 97 aa8.83□□□□□ -1
LINC00173-201ENST00000470091 PLA2G1BP04054 148 aaKnown RBP8.82□□□□□ -1
LINC00173-201ENST00000470091 NPC2P61916 151 aa8.82□□□□□ -1
LINC00173-201ENST00000470091 CIRBPQ14011 172 aaKnown RBP8.82□□□□□ -1
LINC00173-201ENST00000470091 ERG28Q9UKR5 140 aa8.82□□□□□ -1
LINC00173-201ENST00000470091 PFN2P35080 140 aa8.81□□□□□ -1
LINC00173-201ENST00000470091 LINC00158P58513 81 aa8.81□□□□□ -1
LINC00173-201ENST00000470091 C9orf116Q5BN46 136 aaPredicted RBP8.81□□□□□ -1
LINC00173-201ENST00000470091 C2orf48Q96LS8 159 aa8.81□□□□□ -1
LINC00173-201ENST00000470091 CAMK2N2Q96S95 79 aa8.81□□□□□ -1
LINC00173-201ENST00000470091 Q6ZSA8 131 aa8.8□□□□□ -1
LINC00173-201ENST00000470091 MUSTN1Q8IVN3 82 aa8.8□□□□□ -1
LINC00173-201ENST00000470091 C6orf48Q9UBA6 75 aa8.8□□□□□ -1
LINC00173-201ENST00000470091 LRP1Q07954 4544 aaKnown RBP8.8□□□□□ -1
LINC00173-201ENST00000470091 PTTG1IPP53801 180 aa8.79□□□□□ -1
LINC00173-201ENST00000470091 Q6ZRU5 148 aa8.79□□□□□ -1
LINC00173-201ENST00000470091 MIR7-3HGQ8N6C7 128 aa8.79□□□□□ -1
LINC00173-201ENST00000470091 EIF4EBP3O60516 100 aaPredicted RBP8.78□□□□□ -1
LINC00173-201ENST00000470091 SOSTDC1Q6X4U4 206 aa8.78□□□□□ -1
LINC00173-201ENST00000470091 Q6ZVH6 145 aa8.78□□□□□ -1
LINC00173-201ENST00000470091 SCXQ7RTU7 201 aa8.78□□□□□ -1
LINC00173-201ENST00000470091 TRBV30A0A0K0K1B3 111 aa8.77□□□□□ -1.01
LINC00173-201ENST00000470091 F8WDY8 70 aa8.77□□□□□ -1.01
LINC00173-201ENST00000470091 K7ERJ3 54 aa8.77□□□□□ -1.01
LINC00173-201ENST00000470091 LINC00308Q8TCZ7 52 aa8.77□□□□□ -1.01
LINC00173-201ENST00000470091 IFITM1P13164 125 aa8.76□□□□□ -1.01
LINC00173-201ENST00000470091 SYCNQ0VAF6 134 aa8.76□□□□□ -1.01
LINC00173-201ENST00000470091 CARD19Q96LW7 228 aa8.76□□□□□ -1.01
LINC00173-201ENST00000470091 NHP2Q9NX24 153 aaKnown RBP8.76□□□□□ -1.01
LINC00173-201ENST00000470091 TMEM238LA0A1B0GVL6 79 aa8.75□□□□□ -1.01
LINC00173-201ENST00000470091 A4D1N5 150 aa8.75□□□□□ -1.01
LINC00173-201ENST00000470091 A6NDN8 102 aa8.75□□□□□ -1.01
LINC00173-201ENST00000470091 A6NJY4 79 aa8.75□□□□□ -1.01
LINC00173-201ENST00000470091 SLPIP03973 132 aa8.75□□□□□ -1.01
LINC00173-201ENST00000470091 RPL24P83731 157 aaKnown RBP8.75□□□□□ -1.01
LINC00173-201ENST00000470091 COX17Q14061 63 aa8.75□□□□□ -1.01
LINC00173-201ENST00000470091 COL5A1-AS1Q5SY13 56 aa8.75□□□□□ -1.01
LINC00173-201ENST00000470091 KRTAP29-1A8MX34 341 aaPredicted RBP8.74□□□□□ -1.01
LINC00173-201ENST00000470091 FAT3Q8TDW7 4589 aa8.74□□□□□ -1.01
LINC00173-201ENST00000470091 C14orf177Q52M58 125 aa8.73□□□□□ -1.01
LINC00173-201ENST00000470091 CIRBP-AS1Q8TBR5 109 aa8.73□□□□□ -1.01
LINC00173-201ENST00000470091 COPS9Q8WXC6 57 aa8.73□□□□□ -1.01
LINC00173-201ENST00000470091 A0A1B0GWB2 263 aa8.72□□□□□ -1.01
LINC00173-201ENST00000470091 SND1-IT1Q9HBX3 110 aa8.72□□□□□ -1.01
LINC00173-201ENST00000470091 CFC1BP0CG36 223 aa8.71□□□□□ -1.02
LINC00173-201ENST00000470091 CFC1P0CG37 223 aa8.71□□□□□ -1.02
LINC00173-201ENST00000470091 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.7□□□□□ -1.02
LINC00173-201ENST00000470091 TAX1BP3O14907 124 aa8.7□□□□□ -1.02
LINC00173-201ENST00000470091 RNF151Q2KHN1 245 aa8.7□□□□□ -1.02
LINC00173-201ENST00000470091 LBHQ53QV2 105 aaPredicted RBP8.7□□□□□ -1.02
LINC00173-201ENST00000470091 RAB37Q96AX2 223 aa8.7□□□□□ -1.02
LINC00173-201ENST00000470091 PPDPFQ9H3Y8 114 aa8.7□□□□□ -1.02
LINC00173-201ENST00000470091 A0A0B4J2C4 111 aa8.69□□□□□ -1.02
LINC00173-201ENST00000470091 NDUFC2-KCTD14E9PQ53 114 aa8.69□□□□□ -1.02
LINC00173-201ENST00000470091 KRTAP10-4P60372 401 aaPredicted RBP8.69□□□□□ -1.02
LINC00173-201ENST00000470091 HMCN2Q8NDA2 5059 aa8.68□□□□□ -1.02
LINC00173-201ENST00000470091 CNBPP62633 177 aaKnown RBP8.68□□□□□ -1.02
LINC00173-201ENST00000470091 RPL18AQ02543 176 aaKnown RBP8.68□□□□□ -1.02
LINC00173-201ENST00000470091 GAGE2EQ4V326 116 aa8.68□□□□□ -1.02
LINC00173-201ENST00000470091 Q6ZRP5 223 aa8.68□□□□□ -1.02
LINC00173-201ENST00000470091 XAGE1AQ9HD64 81 aa8.68□□□□□ -1.02
LINC00173-201ENST00000470091 GAGE2DQ9UEU5 116 aa8.68□□□□□ -1.02
LINC00173-201ENST00000470091 LOC107984156A0A0G2JMH3 177 aa8.67□□□□□ -1.02
LINC00173-201ENST00000470091 ARL17AQ8IVW1 177 aa8.67□□□□□ -1.02
LINC00173-201ENST00000470091 Q8NDZ9 215 aa8.67□□□□□ -1.02
LINC00173-201ENST00000470091 NAA38Q9BRA0 125 aaKnown RBP8.67□□□□□ -1.02
LINC00173-201ENST00000470091 TLX1NBP0CAT3 122 aa8.66□□□□□ -1.02
LINC00173-201ENST00000470091 IGKV2-28A0A075B6P5 120 aa8.65□□□□□ -1.02
LINC00173-201ENST00000470091 IGKV2D-28P01615 120 aa8.65□□□□□ -1.02
LINC00173-201ENST00000470091 RPL13AP40429 203 aaKnown RBP8.65□□□□□ -1.02
LINC00173-201ENST00000470091 RPL37AP61513 92 aaKnown RBP8.65□□□□□ -1.02
LINC00173-201ENST00000470091 PRO1854Q9UHT4 67 aa8.65□□□□□ -1.02
LINC00173-201ENST00000470091 PKHD1L1Q86WI1 4243 aa8.65□□□□□ -1.02
LINC00173-201ENST00000470091 UBR4Q5T4S7 5183 aa8.65□□□□□ -1.03
LINC00173-201ENST00000470091 LOC107984640A0A0U1RRK4 108 aa8.64□□□□□ -1.03
LINC00173-201ENST00000470091 H7C2G1 150 aa8.64□□□□□ -1.03
LINC00173-201ENST00000470091 NCR3O14931 201 aa8.64□□□□□ -1.03
LINC00173-201ENST00000470091 TSPAN13O95857 204 aa8.64□□□□□ -1.03
LINC00173-201ENST00000470091 OXTP01178 125 aa8.64□□□□□ -1.03
LINC00173-201ENST00000470091 GAGE2BQ13066 116 aa8.64□□□□□ -1.03
LINC00173-201ENST00000470091 SERTAD4-AS1Q5TG53 156 aa8.64□□□□□ -1.03
LINC00173-201ENST00000470091 A0A1B0GV90 55 aa8.63□□□□□ -1.03
LINC00173-201ENST00000470091 C9orf118A6NHY6 69 aa8.63□□□□□ -1.03
LINC00173-201ENST00000470091 PRR3P79522 188 aaKnown RBP8.63□□□□□ -1.03
LINC00173-201ENST00000470091 C9orf129Q5T035 196 aaKnown RBP8.63□□□□□ -1.03
LINC00173-201ENST00000470091 LINC00337Q8N6G1 96 aa8.63□□□□□ -1.03
LINC00173-201ENST00000470091 H3BUT2 72 aa8.62□□□□□ -1.03
LINC00173-201ENST00000470091 NDUFC2O95298 119 aa8.62□□□□□ -1.03
LINC00173-201ENST00000470091 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.62□□□□□ -1.03
LINC00173-201ENST00000470091 PANO1I0J062 215 aa8.61□□□□□ -1.03
LINC00173-201ENST00000470091 Q1RN00 199 aa8.61□□□□□ -1.03
LINC00173-201ENST00000470091 C9orf163Q8N9P6 203 aa8.61□□□□□ -1.03
LINC00173-201ENST00000470091 DPH3Q96FX2 82 aa8.61□□□□□ -1.03
LINC00173-201ENST00000470091 A0A096LNI7 61 aa8.6□□□□□ -1.03
LINC00173-201ENST00000470091 TRAV13-2A0A0B4J235 113 aa8.6□□□□□ -1.03
LINC00173-201ENST00000470091 VPREB1P12018 145 aa8.6□□□□□ -1.03
LINC00173-201ENST00000470091 IGKV2-24A0A0C4DH68 120 aa8.59□□□□□ -1.03
LINC00173-201ENST00000470091 SDIM1Q6ZPB5 146 aa8.59□□□□□ -1.03
LINC00173-201ENST00000470091 OR13C6PQ8NH95 151 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms