RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 PRUNE2Q8WUY3 3088 aa0.58□□□□□ -2.32
VPS8-220ENST00000469713 UQCRHLA0A096LP55 91 aa0.58□□□□□ -2.32
VPS8-220ENST00000469713 C7orf77A4D0Y5 90 aa0.58□□□□□ -2.32
VPS8-220ENST00000469713 CYB5AP00167 134 aa0.58□□□□□ -2.32
VPS8-220ENST00000469713 UQCRHP07919 91 aa0.58□□□□□ -2.32
VPS8-220ENST00000469713 PMCHL1Q16048 86 aa0.58□□□□□ -2.32
VPS8-220ENST00000469713 SMIM4Q8WVI0 70 aa0.58□□□□□ -2.32
VPS8-220ENST00000469713 S100A16Q96FQ6 103 aaKnown RBP0.58□□□□□ -2.32
VPS8-220ENST00000469713 SPRR4Q96PI1 79 aa0.58□□□□□ -2.32
VPS8-220ENST00000469713 PSENENQ9NZ42 101 aa0.58□□□□□ -2.32
VPS8-220ENST00000469713 WNK1Q9H4A3 2382 aa0.58□□□□□ -2.32
VPS8-220ENST00000469713 F5P12259 2224 aa0.58□□□□□ -2.32
VPS8-220ENST00000469713 ARHGEF12Q9NZN5 1544 aa0.58□□□□□ -2.32
VPS8-220ENST00000469713 KNDC1Q76NI1 1749 aa0.58□□□□□ -2.32
VPS8-220ENST00000469713 CCDC18Q5T9S5 1454 aa0.57□□□□□ -2.32
VPS8-220ENST00000469713 HMCN2Q8NDA2 5059 aa0.57□□□□□ -2.32
VPS8-220ENST00000469713 A0A087WVE0 104 aa0.57□□□□□ -2.32
VPS8-220ENST00000469713 A0A1B0GWA3 101 aa0.57□□□□□ -2.32
VPS8-220ENST00000469713 ZNF815PA8K554 130 aa0.57□□□□□ -2.32
VPS8-220ENST00000469713 F8WEM9 126 aa0.57□□□□□ -2.32
VPS8-220ENST00000469713 SAA2P0DJI9 122 aaPredicted RBP0.57□□□□□ -2.32
VPS8-220ENST00000469713 HAMPP81172 84 aa0.57□□□□□ -2.32
VPS8-220ENST00000469713 PEA15Q15121 130 aa0.57□□□□□ -2.32
VPS8-220ENST00000469713 PSMG4Q5JS54 123 aa0.57□□□□□ -2.32
VPS8-220ENST00000469713 LCN9Q8WX39 176 aa0.57□□□□□ -2.32
VPS8-220ENST00000469713 APCP25054 2843 aa0.57□□□□□ -2.32
VPS8-220ENST00000469713 ABCC3O15438 1527 aa0.57□□□□□ -2.32
VPS8-220ENST00000469713 XIRP2A4UGR9 3374 aa0.57□□□□□ -2.32
VPS8-220ENST00000469713 RAPGEF6Q8TEU7 1601 aa0.56□□□□□ -2.32
VPS8-220ENST00000469713 DMXL2Q8TDJ6 3036 aa0.56□□□□□ -2.32
VPS8-220ENST00000469713 TRIOO75962 3097 aa0.56□□□□□ -2.32
VPS8-220ENST00000469713 POLA1P09884 1462 aaPredicted RBP0.56□□□□□ -2.32
VPS8-220ENST00000469713 ARHGAP35Q9NRY4 1499 aa0.56□□□□□ -2.32
VPS8-220ENST00000469713 LRRC37A2A6NM11 1700 aa0.56□□□□□ -2.32
VPS8-220ENST00000469713 MYO7AQ13402 2215 aa0.56□□□□□ -2.32
VPS8-220ENST00000469713 EPRSP07814 1512 aaKnown RBP0.56□□□□□ -2.32
VPS8-220ENST00000469713 MGPP08493 103 aa0.56□□□□□ -2.32
VPS8-220ENST00000469713 ARMS2P0C7Q2 107 aa0.56□□□□□ -2.32
VPS8-220ENST00000469713 COX17Q14061 63 aa0.56□□□□□ -2.32
VPS8-220ENST00000469713 Q6JHZ5 121 aa0.56□□□□□ -2.32
VPS8-220ENST00000469713 UNC13BO14795 1591 aa0.56□□□□□ -2.32
VPS8-220ENST00000469713 NBASA2RRP1 2371 aa0.56□□□□□ -2.32
VPS8-220ENST00000469713 CSMD2Q7Z408 3487 aa0.56□□□□□ -2.32
VPS8-220ENST00000469713 LRP6O75581 1613 aa0.56□□□□□ -2.32
VPS8-220ENST00000469713 MYO3AQ8NEV4 1616 aa0.56□□□□□ -2.32
VPS8-220ENST00000469713 ATMQ13315 3056 aa0.56□□□□□ -2.32
VPS8-220ENST00000469713 SUPT6HQ7KZ85 1726 aaKnown RBP0.55□□□□□ -2.32
VPS8-220ENST00000469713 ATP10BO94823 1461 aa0.55□□□□□ -2.32
VPS8-220ENST00000469713 PAPPA2Q9BXP8 1791 aa0.55□□□□□ -2.32
VPS8-220ENST00000469713 F8P00451 2351 aa0.55□□□□□ -2.32
VPS8-220ENST00000469713 FXYD6P3P58550 94 aa0.55□□□□□ -2.32
VPS8-220ENST00000469713 WFDC2Q14508 124 aa0.55□□□□□ -2.32
VPS8-220ENST00000469713 ETDBQ3ZM63 59 aa0.55□□□□□ -2.32
VPS8-220ENST00000469713 NMSQ5H8A3 153 aa0.55□□□□□ -2.32
VPS8-220ENST00000469713 C10orf113Q5VZT2 155 aa0.55□□□□□ -2.32
VPS8-220ENST00000469713 SSBP3-AS1Q7Z2R9 100 aa0.55□□□□□ -2.32
VPS8-220ENST00000469713 PROK2Q9HC23 129 aa0.55□□□□□ -2.32
VPS8-220ENST00000469713 LAMC1P11047 1609 aa0.55□□□□□ -2.32
VPS8-220ENST00000469713 PLIN4Q96Q06 1357 aa0.55□□□□□ -2.32
VPS8-220ENST00000469713 CEP162Q5TB80 1403 aa0.55□□□□□ -2.32
VPS8-220ENST00000469713 NLRP1Q9C000 1473 aa0.54□□□□□ -2.32
VPS8-220ENST00000469713 CADP27708 2225 aa0.54□□□□□ -2.32
VPS8-220ENST00000469713 KIF14Q15058 1648 aa0.54□□□□□ -2.32
VPS8-220ENST00000469713 NHSL1Q5SYE7 1610 aa0.54□□□□□ -2.32
VPS8-220ENST00000469713 NBPF19A0A087WUL8 3843 aa0.54□□□□□ -2.32
VPS8-220ENST00000469713 H3BQF6 201 aa0.54□□□□□ -2.32
VPS8-220ENST00000469713 BCE1O60756 84 aa0.54□□□□□ -2.32
VPS8-220ENST00000469713 LEPROTL1O95214 131 aa0.54□□□□□ -2.32
VPS8-220ENST00000469713 SPINK7P58062 85 aa0.54□□□□□ -2.32
VPS8-220ENST00000469713 ALKAL2Q6UX46 152 aa0.54□□□□□ -2.32
VPS8-220ENST00000469713 ZNF720Q7Z2F6 126 aa0.54□□□□□ -2.32
VPS8-220ENST00000469713 UBE2DNLQ8IWF7 75 aa0.54□□□□□ -2.32
VPS8-220ENST00000469713 DEFB107AQ8IZN7 70 aa0.54□□□□□ -2.32
VPS8-220ENST00000469713 TMEM263Q8WUH6 116 aaKnown RBP0.54□□□□□ -2.32
VPS8-220ENST00000469713 FAM103A1Q9BTL3 118 aaKnown RBP0.54□□□□□ -2.32
VPS8-220ENST00000469713 MGAQ8IWI9 3026 aa0.54□□□□□ -2.32
VPS8-220ENST00000469713 WDFY3Q8IZQ1 3526 aa0.54□□□□□ -2.32
VPS8-220ENST00000469713 CENPEQ02224 2701 aa0.54□□□□□ -2.32
VPS8-220ENST00000469713 MAP1AP78559 2803 aaPredicted RBP0.54□□□□□ -2.32
VPS8-220ENST00000469713 UACAQ9BZF9 1416 aa0.54□□□□□ -2.32
VPS8-220ENST00000469713 ANKRD36A6QL64 1941 aa0.54□□□□□ -2.32
VPS8-220ENST00000469713 FANCAO15360 1455 aa0.54□□□□□ -2.32
VPS8-220ENST00000469713 C1orf167Q5SNV9 1468 aa0.54□□□□□ -2.32
VPS8-220ENST00000469713 DMXL1Q9Y485 3027 aa0.54□□□□□ -2.32
VPS8-220ENST00000469713 NEXMIFQ5QGS0 1516 aa0.54□□□□□ -2.32
VPS8-220ENST00000469713 DIP2BQ9P265 1576 aa0.53□□□□□ -2.32
VPS8-220ENST00000469713 SHPRHQ149N8 1683 aa0.53□□□□□ -2.32
VPS8-220ENST00000469713 CRYBG1Q9Y4K1 1723 aa0.53□□□□□ -2.32
VPS8-220ENST00000469713 DCHS2Q6V1P9 2916 aa0.53□□□□□ -2.32
VPS8-220ENST00000469713 CHD7Q9P2D1 2997 aa0.53□□□□□ -2.32
VPS8-220ENST00000469713 IQCF6A8MYZ5 107 aa0.53□□□□□ -2.32
VPS8-220ENST00000469713 LINC01600Q96MT4 127 aa0.53□□□□□ -2.32
VPS8-220ENST00000469713 LINC00846Q9NV44 126 aa0.53□□□□□ -2.32
VPS8-220ENST00000469713 SPCS1Q9Y6A9 102 aa0.53□□□□□ -2.32
VPS8-220ENST00000469713 SVEP1Q4LDE5 3571 aa0.53□□□□□ -2.32
VPS8-220ENST00000469713 DNAH14Q0VDD8 3507 aa0.52□□□□□ -2.33
VPS8-220ENST00000469713 SRRM2Q9UQ35 2752 aaKnown RBP0.52□□□□□ -2.33
VPS8-220ENST00000469713 D6R8Y8 96 aa0.52□□□□□ -2.33
VPS8-220ENST00000469713 PIN1P1O15428 100 aa0.52□□□□□ -2.33
VPS8-220ENST00000469713 HMGN2P05204 90 aaKnown RBP0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms