RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 C9orf47Q6ZRZ4 202 aa7.05□□□□□ -1.28
NUP50-214ENST00000469163 STAB2Q8WWQ8 2551 aa7.05□□□□□ -1.28
NUP50-214ENST00000469163 ZNF73O43830 326 aaPredicted RBP7.04□□□□□ -1.28
NUP50-214ENST00000469163 TMEM254Q8TBM7 123 aa7.04□□□□□ -1.28
NUP50-214ENST00000469163 TGP01266 2768 aa7.03□□□□□ -1.28
NUP50-214ENST00000469163 IGHV4-4A0A075B6R2 117 aa7.02□□□□□ -1.28
NUP50-214ENST00000469163 K7EQG2 157 aa7.02□□□□□ -1.28
NUP50-214ENST00000469163 UBE2L6O14933 153 aa7.02□□□□□ -1.28
NUP50-214ENST00000469163 CRPP02741 224 aa7.02□□□□□ -1.28
NUP50-214ENST00000469163 UBE2BP63146 152 aa7.02□□□□□ -1.29
NUP50-214ENST00000469163 ODF3L2Q3SX64 289 aa7.02□□□□□ -1.29
NUP50-214ENST00000469163 MDFIQ99750 246 aa7.01□□□□□ -1.29
NUP50-214ENST00000469163 OVOL2Q9BRP0 275 aa7.01□□□□□ -1.29
NUP50-214ENST00000469163 Q9H8V8 135 aa7.01□□□□□ -1.29
NUP50-214ENST00000469163 POLR2KP53803 58 aaKnown RBP7.01□□□□□ -1.29
NUP50-214ENST00000469163 TRGV4A0A0C4DH28 118 aa7.01□□□□□ -1.29
NUP50-214ENST00000469163 Q6ZRP5 223 aa7.01□□□□□ -1.29
NUP50-214ENST00000469163 IGLV4-3A0A075B6K6 122 aa7□□□□□ -1.29
NUP50-214ENST00000469163 INSP01308 110 aa7□□□□□ -1.29
NUP50-214ENST00000469163 RPL36AP83881 106 aaKnown RBP7□□□□□ -1.29
NUP50-214ENST00000469163 SUMO4Q6EEV6 95 aa7□□□□□ -1.29
NUP50-214ENST00000469163 Q8N3U1 123 aa7□□□□□ -1.29
NUP50-214ENST00000469163 ZFAND2AQ8N6M9 145 aa7□□□□□ -1.29
NUP50-214ENST00000469163 RPL36ALQ969Q0 106 aaKnown RBP7□□□□□ -1.29
NUP50-214ENST00000469163 LINC00588Q9Y4M8 146 aa7□□□□□ -1.29
NUP50-214ENST00000469163 C19orf54Q5BKX5 351 aa7□□□□□ -1.29
NUP50-214ENST00000469163 PRR26Q8N8Z3 221 aa7□□□□□ -1.29
NUP50-214ENST00000469163 ORMDL1Q9P0S3 153 aa7□□□□□ -1.29
NUP50-214ENST00000469163 TRBV10-3A0A0K0K1G6 114 aa7□□□□□ -1.29
NUP50-214ENST00000469163 Q6ZTI0 123 aa7□□□□□ -1.29
NUP50-214ENST00000469163 Q6ZVQ6 151 aa7□□□□□ -1.29
NUP50-214ENST00000469163 A8MUN3 132 aa6.99□□□□□ -1.29
NUP50-214ENST00000469163 CLPSL2Q6UWE3 100 aa6.99□□□□□ -1.29
NUP50-214ENST00000469163 C11orf72Q8NBR9 251 aa6.99□□□□□ -1.29
NUP50-214ENST00000469163 ANK3Q12955 4377 aaKnown RBP6.99□□□□□ -1.29
NUP50-214ENST00000469163 TRAV22A0A0B4J277 110 aa6.98□□□□□ -1.29
NUP50-214ENST00000469163 PRYO14603 147 aa6.98□□□□□ -1.29
NUP50-214ENST00000469163 BCE1O60756 84 aa6.98□□□□□ -1.29
NUP50-214ENST00000469163 NREPQ16612 68 aa6.98□□□□□ -1.29
NUP50-214ENST00000469163 TENM2Q9NT68 2774 aa6.98□□□□□ -1.29
NUP50-214ENST00000469163 NDUFS5O43920 106 aa6.98□□□□□ -1.29
NUP50-214ENST00000469163 SCXQ7RTU7 201 aa6.98□□□□□ -1.29
NUP50-214ENST00000469163 TENM3Q9P273 2699 aa6.98□□□□□ -1.29
NUP50-214ENST00000469163 TRBV7-4A0A0J9YYF1 115 aa6.97□□□□□ -1.29
NUP50-214ENST00000469163 NANOS2P60321 138 aaKnown RBP6.97□□□□□ -1.29
NUP50-214ENST00000469163 SYCNQ0VAF6 134 aa6.97□□□□□ -1.29
NUP50-214ENST00000469163 LINC00269Q8N2A0 174 aa6.97□□□□□ -1.29
NUP50-214ENST00000469163 C20orf203Q8NBC4 194 aa6.97□□□□□ -1.29
NUP50-214ENST00000469163 CHKB-CPT1BH3BT56 60 aa6.96□□□□□ -1.29
NUP50-214ENST00000469163 VPREB1P12018 145 aa6.96□□□□□ -1.3
NUP50-214ENST00000469163 Q1T7F1 81 aa6.96□□□□□ -1.3
NUP50-214ENST00000469163 IGKV2-29A2NJV5 120 aaPredicted RBP6.95□□□□□ -1.3
NUP50-214ENST00000469163 LINC01547P58512 204 aaPredicted RBP6.95□□□□□ -1.3
NUP50-214ENST00000469163 OBSCN-AS1Q96MR7 158 aa6.95□□□□□ -1.3
NUP50-214ENST00000469163 LYRM9A8MSI8 78 aa6.95□□□□□ -1.3
NUP50-214ENST00000469163 SMIM11BQ8TCY0 68 aa6.95□□□□□ -1.3
NUP50-214ENST00000469163 JMJD7-PLA2G4BH0Y9G9 81 aa6.94□□□□□ -1.3
NUP50-214ENST00000469163 C9orf66Q5T8R8 295 aa6.94□□□□□ -1.3
NUP50-214ENST00000469163 CDKN2A-AS1Q9UH64 79 aa6.94□□□□□ -1.3
NUP50-214ENST00000469163 LOC100131303A0A0U1RQF7 123 aa6.94□□□□□ -1.3
NUP50-214ENST00000469163 NDUFA1O15239 70 aa6.94□□□□□ -1.3
NUP50-214ENST00000469163 H0YGX0 51 aa6.94□□□□□ -1.3
NUP50-214ENST00000469163 PRR4Q16378 134 aa6.93□□□□□ -1.3
NUP50-214ENST00000469163 Q6ZTC4 211 aa6.93□□□□□ -1.3
NUP50-214ENST00000469163 FAM19A3Q7Z5A8 133 aa6.93□□□□□ -1.3
NUP50-214ENST00000469163 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.93□□□□□ -1.3
NUP50-214ENST00000469163 TRBV10-1A0A0K0K1A3 114 aa6.93□□□□□ -1.3
NUP50-214ENST00000469163 IGHV4-30-4P0DP06 118 aa6.93□□□□□ -1.3
NUP50-214ENST00000469163 hDV103S1A0JD37 113 aa6.93□□□□□ -1.3
NUP50-214ENST00000469163 RNASE3P12724 160 aaKnown RBP6.92□□□□□ -1.3
NUP50-214ENST00000469163 HIGD2AQ9BW72 106 aa6.92□□□□□ -1.3
NUP50-214ENST00000469163 BPY2O14599 106 aa6.92□□□□□ -1.3
NUP50-214ENST00000469163 LINC00337Q8N6G1 96 aa6.92□□□□□ -1.3
NUP50-214ENST00000469163 C1orf64Q8NEQ6 169 aa6.92□□□□□ -1.3
NUP50-214ENST00000469163 HCG22E2RYF7 251 aa6.91□□□□□ -1.3
NUP50-214ENST00000469163 IGLV1-51P01701 117 aa6.91□□□□□ -1.3
NUP50-214ENST00000469163 UBE2AP49459 152 aa6.91□□□□□ -1.3
NUP50-214ENST00000469163 SND1-IT1Q9HBX3 110 aa6.91□□□□□ -1.3
NUP50-214ENST00000469163 C16orf90A8MZG2 172 aa6.9□□□□□ -1.3
NUP50-214ENST00000469163 TOMM7Q9P0U1 55 aa6.9□□□□□ -1.3
NUP50-214ENST00000469163 LINC00315P59091 139 aa6.9□□□□□ -1.31
NUP50-214ENST00000469163 SERTAD4-AS1Q5TG53 156 aa6.89□□□□□ -1.31
NUP50-214ENST00000469163 LCA10Q71F78 164 aa6.89□□□□□ -1.31
NUP50-214ENST00000469163 IGLV10-54A0A075B6I4 117 aa6.89□□□□□ -1.31
NUP50-214ENST00000469163 C7orf65Q6ZTY9 151 aa6.88□□□□□ -1.31
NUP50-214ENST00000469163 CD164L2Q6UWJ8 174 aa6.88□□□□□ -1.31
NUP50-214ENST00000469163 NKAPP1Q8N9T2 125 aa6.88□□□□□ -1.31
NUP50-214ENST00000469163 KIF25-AS1Q9Y6Z4 181 aa6.88□□□□□ -1.31
NUP50-214ENST00000469163 Q6ZSN1 163 aa6.88□□□□□ -1.31
NUP50-214ENST00000469163 A6NED7 52 aa6.87□□□□□ -1.31
NUP50-214ENST00000469163 KLLNB2CW77 178 aa6.87□□□□□ -1.31
NUP50-214ENST00000469163 GYPEP15421 78 aa6.86□□□□□ -1.31
NUP50-214ENST00000469163 LINC00158P58513 81 aa6.86□□□□□ -1.31
NUP50-214ENST00000469163 TRBV6-5A0A0K0K1A5 114 aa6.86□□□□□ -1.31
NUP50-214ENST00000469163 ATP11AUNQ6ZP68 121 aa6.86□□□□□ -1.31
NUP50-214ENST00000469163 M0QY20 66 aa6.85□□□□□ -1.31
NUP50-214ENST00000469163 PHF5AQ7RTV0 110 aaKnown RBP6.85□□□□□ -1.31
NUP50-214ENST00000469163 DIRC1Q969H9 104 aa6.85□□□□□ -1.31
NUP50-214ENST00000469163 IGHV4-28A0A0C4DH34 117 aa6.85□□□□□ -1.31
NUP50-214ENST00000469163 Q5VV11 94 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms