RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 H1FX-AS1Q4G0G2 97 aa-0.13□□□□□ -2.43
VPS13A-209ENST00000467124 KMT2AQ03164 3969 aa-0.14□□□□□ -2.43
VPS13A-209ENST00000467124 NKTRP30414 1462 aaKnown RBP-0.14□□□□□ -2.43
VPS13A-209ENST00000467124 CUX1P39880 1505 aa-0.14□□□□□ -2.43
VPS13A-209ENST00000467124 ABCC2Q92887 1545 aa-0.14□□□□□ -2.43
VPS13A-209ENST00000467124 AKAP12Q02952 1782 aa-0.14□□□□□ -2.43
VPS13A-209ENST00000467124 CCDC141Q6ZP82 1450 aa-0.15□□□□□ -2.43
VPS13A-209ENST00000467124 EP300Q09472 2414 aaPredicted RBP-0.15□□□□□ -2.43
VPS13A-209ENST00000467124 HMGN3Q15651 99 aa-0.15□□□□□ -2.43
VPS13A-209ENST00000467124 C5P01031 1676 aa-0.15□□□□□ -2.43
VPS13A-209ENST00000467124 SHPRHQ149N8 1683 aa-0.15□□□□□ -2.43
VPS13A-209ENST00000467124 APC2O95996 2303 aa-0.16□□□□□ -2.43
VPS13A-209ENST00000467124 CLTCQ00610 1675 aaKnown RBP-0.16□□□□□ -2.44
VPS13A-209ENST00000467124 Q9H521 79 aa-0.16□□□□□ -2.44
VPS13A-209ENST00000467124 ANKRD26Q9UPS8 1709 aa-0.16□□□□□ -2.44
VPS13A-209ENST00000467124 CCNB3Q8WWL7 1395 aa-0.17□□□□□ -2.44
VPS13A-209ENST00000467124 SPTY2D1-AS1A0A0U1RR47 76 aa-0.17□□□□□ -2.44
VPS13A-209ENST00000467124 DCHS2Q6V1P9 2916 aa-0.17□□□□□ -2.44
VPS13A-209ENST00000467124 FLNAP21333 2647 aaKnown RBP-0.17□□□□□ -2.44
VPS13A-209ENST00000467124 SAMD9Q5K651 1589 aa-0.18□□□□□ -2.44
VPS13A-209ENST00000467124 GYPAP02724 150 aa-0.18□□□□□ -2.44
VPS13A-209ENST00000467124 LELP1Q5T871 98 aa-0.18□□□□□ -2.44
VPS13A-209ENST00000467124 HEPN1Q6WQI6 88 aa-0.18□□□□□ -2.44
VPS13A-209ENST00000467124 MRPL34Q9BQ48 92 aaKnown RBP-0.18□□□□□ -2.44
VPS13A-209ENST00000467124 LRP2P98164 4655 aa-0.19□□□□□ -2.44
VPS13A-209ENST00000467124 PEA15Q15121 130 aa-0.19□□□□□ -2.44
VPS13A-209ENST00000467124 KRTAP6-1Q3LI64 71 aa-0.19□□□□□ -2.44
VPS13A-209ENST00000467124 ALKAL2Q6UX46 152 aa-0.19□□□□□ -2.44
VPS13A-209ENST00000467124 ALMS1Q8TCU4 4167 aa-0.19□□□□□ -2.44
VPS13A-209ENST00000467124 MUC12Q9UKN1 5478 aa-0.19□□□□□ -2.44
VPS13A-209ENST00000467124 MUC2Q02817 5179 aa-0.19□□□□□ -2.44
VPS13A-209ENST00000467124 M0R2T5 61 aa-0.2□□□□□ -2.44
VPS13A-209ENST00000467124 BSNQ9UPA5 3926 aa-0.2□□□□□ -2.44
VPS13A-209ENST00000467124 ATP10BO94823 1461 aa-0.21□□□□□ -2.44
VPS13A-209ENST00000467124 SETXQ7Z333 2677 aaKnown RBP-0.21□□□□□ -2.44
VPS13A-209ENST00000467124 HMGN2P05204 90 aaKnown RBP-0.21□□□□□ -2.44
VPS13A-209ENST00000467124 UBE2D4Q9Y2X8 147 aa-0.21□□□□□ -2.44
VPS13A-209ENST00000467124 STAB1Q9NY15 2570 aa-0.21□□□□□ -2.44
VPS13A-209ENST00000467124 LRRC37AA6NMS7 1700 aa-0.21□□□□□ -2.44
VPS13A-209ENST00000467124 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.22□□□□□ -2.44
VPS13A-209ENST00000467124 MYH4Q9Y623 1939 aa-0.22□□□□□ -2.44
VPS13A-209ENST00000467124 SMIM11AP58511 58 aa-0.22□□□□□ -2.44
VPS13A-209ENST00000467124 CRYBG1Q9Y4K1 1723 aa-0.23□□□□□ -2.45
VPS13A-209ENST00000467124 IQSEC2Q5JU85 1478 aa-0.23□□□□□ -2.45
VPS13A-209ENST00000467124 NMSQ5H8A3 153 aa-0.24□□□□□ -2.45
VPS13A-209ENST00000467124 ACANP16112 2415 aa-0.24□□□□□ -2.45
VPS13A-209ENST00000467124 FANCAO15360 1455 aa-0.24□□□□□ -2.45
VPS13A-209ENST00000467124 EPRSP07814 1512 aaKnown RBP-0.24□□□□□ -2.45
VPS13A-209ENST00000467124 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.25□□□□□ -2.45
VPS13A-209ENST00000467124 IQCF6A8MYZ5 107 aa-0.25□□□□□ -2.45
VPS13A-209ENST00000467124 KRTAP20-2Q3LI61 65 aa-0.25□□□□□ -2.45
VPS13A-209ENST00000467124 KRTAP19-7Q3SYF9 63 aa-0.25□□□□□ -2.45
VPS13A-209ENST00000467124 NEXMIFQ5QGS0 1516 aa-0.25□□□□□ -2.45
VPS13A-209ENST00000467124 HECTD4Q9Y4D8 3996 aa-0.26□□□□□ -2.45
VPS13A-209ENST00000467124 KIF20BQ96Q89 1820 aa-0.26□□□□□ -2.45
VPS13A-209ENST00000467124 V9GYS6 101 aa-0.26□□□□□ -2.45
VPS13A-209ENST00000467124 COL14A1Q05707 1796 aaKnown RBP-0.27□□□□□ -2.45
VPS13A-209ENST00000467124 PLGLAQ15195 96 aa-0.27□□□□□ -2.45
VPS13A-209ENST00000467124 CNOT1A5YKK6 2376 aaKnown RBP-0.27□□□□□ -2.45
VPS13A-209ENST00000467124 FLNBO75369 2602 aaKnown RBP-0.28□□□□□ -2.45
VPS13A-209ENST00000467124 KMT2CQ8NEZ4 4911 aaKnown RBP-0.28□□□□□ -2.45
VPS13A-209ENST00000467124 A0A1B0GUT8 65 aa-0.28□□□□□ -2.45
VPS13A-209ENST00000467124 K7EP34 96 aa-0.28□□□□□ -2.45
VPS13A-209ENST00000467124 CCL22O00626 93 aa-0.28□□□□□ -2.45
VPS13A-209ENST00000467124 COX7BP24311 80 aa-0.28□□□□□ -2.45
VPS13A-209ENST00000467124 DEFB135Q30KP9 77 aa-0.28□□□□□ -2.45
VPS13A-209ENST00000467124 S100A16Q96FQ6 103 aaKnown RBP-0.28□□□□□ -2.45
VPS13A-209ENST00000467124 GAFA1Q96PS6 74 aa-0.28□□□□□ -2.45
VPS13A-209ENST00000467124 RGPD2P0DJD1 1756 aa-0.29□□□□□ -2.46
VPS13A-209ENST00000467124 KIAA1551Q9HCM1 1747 aa-0.29□□□□□ -2.46
VPS13A-209ENST00000467124 ZANQ9Y493 2812 aa-0.29□□□□□ -2.46
VPS13A-209ENST00000467124 PYY3Q5JQD4 70 aa-0.29□□□□□ -2.46
VPS13A-209ENST00000467124 WFDC13Q8IUB5 93 aa-0.29□□□□□ -2.46
VPS13A-209ENST00000467124 CDKN2A-AS1Q9UH64 79 aa-0.29□□□□□ -2.46
VPS13A-209ENST00000467124 LRRC7Q96NW7 1537 aa-0.29□□□□□ -2.46
VPS13A-209ENST00000467124 CLIP1P30622 1438 aa-0.3□□□□□ -2.46
VPS13A-209ENST00000467124 PCLOQ9Y6V0 5065 aa-0.3□□□□□ -2.46
VPS13A-209ENST00000467124 LRP1BQ9NZR2 4599 aa-0.3□□□□□ -2.46
VPS13A-209ENST00000467124 TENM2Q9NT68 2774 aa-0.3□□□□□ -2.46
VPS13A-209ENST00000467124 CYB5AP00167 134 aa-0.3□□□□□ -2.46
VPS13A-209ENST00000467124 SPRR2BP35325 72 aa-0.3□□□□□ -2.46
VPS13A-209ENST00000467124 MAGI2Q86UL8 1455 aa-0.3□□□□□ -2.46
VPS13A-209ENST00000467124 PKD1L3Q7Z443 1732 aa-0.3□□□□□ -2.46
VPS13A-209ENST00000467124 UBR1Q8IWV7 1749 aa-0.3□□□□□ -2.46
VPS13A-209ENST00000467124 CEP162Q5TB80 1403 aa-0.3□□□□□ -2.46
VPS13A-209ENST00000467124 MYO3AQ8NEV4 1616 aa-0.31□□□□□ -2.46
VPS13A-209ENST00000467124 HERC2O95714 4834 aa-0.31□□□□□ -2.46
VPS13A-209ENST00000467124 KRTAP19-8Q3LI54 63 aa-0.31□□□□□ -2.46
VPS13A-209ENST00000467124 TROQ12816 1431 aaPredicted RBP-0.31□□□□□ -2.46
VPS13A-209ENST00000467124 NEBP20929 6669 aa-0.31□□□□□ -2.46
VPS13A-209ENST00000467124 HERC1Q15751 4861 aa-0.31□□□□□ -2.46
VPS13A-209ENST00000467124 RGPD4Q7Z3J3 1758 aa-0.32□□□□□ -2.46
VPS13A-209ENST00000467124 KNL1Q8NG31 2342 aa-0.32□□□□□ -2.46
VPS13A-209ENST00000467124 UBR3Q6ZT12 1888 aa-0.32□□□□□ -2.46
VPS13A-209ENST00000467124 USH2AO75445 5202 aa-0.32□□□□□ -2.46
VPS13A-209ENST00000467124 MYMXA0A1B0GTQ4 84 aa-0.32□□□□□ -2.46
VPS13A-209ENST00000467124 PRKDCP78527 4128 aaKnown RBP-0.32□□□□□ -2.46
VPS13A-209ENST00000467124 SRRM2Q9UQ35 2752 aaKnown RBP-0.32□□□□□ -2.46
VPS13A-209ENST00000467124 FAT1Q14517 4588 aa-0.33□□□□□ -2.46
VPS13A-209ENST00000467124 MT4P47944 62 aa-0.33□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms