RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 PEA15Q15121 130 aa0.01□□□□□ -2.41
PRPF40A-205ENST00000467114 V9GYS6 101 aa0.01□□□□□ -2.41
PRPF40A-205ENST00000467114 FLNCQ14315 2725 aa0.01□□□□□ -2.41
PRPF40A-205ENST00000467114 TROQ12816 1431 aaPredicted RBP0.01□□□□□ -2.41
PRPF40A-205ENST00000467114 NKTRP30414 1462 aaKnown RBP0.01□□□□□ -2.41
PRPF40A-205ENST00000467114 SAMD9Q5K651 1589 aa0.01□□□□□ -2.41
PRPF40A-205ENST00000467114 GPR98Q8WXG9 6306 aa0.01□□□□□ -2.41
PRPF40A-205ENST00000467114 C5P01031 1676 aa0.01□□□□□ -2.41
PRPF40A-205ENST00000467114 SYNE2Q8WXH0 6885 aaKnown RBP0.01□□□□□ -2.41
PRPF40A-205ENST00000467114 LRRC37AA6NMS7 1700 aa0□□□□□ -2.41
PRPF40A-205ENST00000467114 SPTA1P02549 2419 aa0□□□□□ -2.41
PRPF40A-205ENST00000467114 HMGN2P05204 90 aaKnown RBP0□□□□□ -2.41
PRPF40A-205ENST00000467114 SPRR2DP22532 72 aa0□□□□□ -2.41
PRPF40A-205ENST00000467114 CUX1P39880 1505 aa0□□□□□ -2.41
PRPF40A-205ENST00000467114 PYY3Q5JQD4 70 aa0□□□□□ -2.41
PRPF40A-205ENST00000467114 IQSEC2Q5JU85 1478 aa0□□□□□ -2.41
PRPF40A-205ENST00000467114 MYH4Q9Y623 1939 aa0□□□□□ -2.41
PRPF40A-205ENST00000467114 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.01□□□□□ -2.41
PRPF40A-205ENST00000467114 LPAP08519 4548 aa-0.01□□□□□ -2.41
PRPF40A-205ENST00000467114 UBE2D4Q9Y2X8 147 aa-0.01□□□□□ -2.41
PRPF40A-205ENST00000467114 SPTY2D1-AS1A0A0U1RR47 76 aa-0.02□□□□□ -2.41
PRPF40A-205ENST00000467114 DEFB112Q30KQ8 113 aa-0.02□□□□□ -2.41
PRPF40A-205ENST00000467114 HSPG2P98160 4391 aa-0.02□□□□□ -2.41
PRPF40A-205ENST00000467114 BSNQ9UPA5 3926 aa-0.03□□□□□ -2.41
PRPF40A-205ENST00000467114 CRYBG1Q9Y4K1 1723 aa-0.03□□□□□ -2.41
PRPF40A-205ENST00000467114 H1FX-AS1Q4G0G2 97 aa-0.03□□□□□ -2.41
PRPF40A-205ENST00000467114 ALMS1Q8TCU4 4167 aa-0.04□□□□□ -2.42
PRPF40A-205ENST00000467114 NMSQ5H8A3 153 aa-0.04□□□□□ -2.42
PRPF40A-205ENST00000467114 MRPL34Q9BQ48 92 aaKnown RBP-0.04□□□□□ -2.42
PRPF40A-205ENST00000467114 NSD1Q96L73 2696 aaPredicted RBP-0.04□□□□□ -2.42
PRPF40A-205ENST00000467114 CHD8Q9HCK8 2581 aa-0.04□□□□□ -2.42
PRPF40A-205ENST00000467114 PRKDCP78527 4128 aaKnown RBP-0.05□□□□□ -2.42
PRPF40A-205ENST00000467114 PLGLAQ15195 96 aa-0.05□□□□□ -2.42
PRPF40A-205ENST00000467114 LELP1Q5T871 98 aa-0.05□□□□□ -2.42
PRPF40A-205ENST00000467114 S100A16Q96FQ6 103 aaKnown RBP-0.05□□□□□ -2.42
PRPF40A-205ENST00000467114 MAP1BP46821 2468 aaKnown RBP-0.05□□□□□ -2.42
PRPF40A-205ENST00000467114 KIAA1551Q9HCM1 1747 aa-0.05□□□□□ -2.42
PRPF40A-205ENST00000467114 CEP162Q5TB80 1403 aa-0.05□□□□□ -2.42
PRPF40A-205ENST00000467114 KIF20BQ96Q89 1820 aa-0.06□□□□□ -2.42
PRPF40A-205ENST00000467114 NEXMIFQ5QGS0 1516 aa-0.06□□□□□ -2.42
PRPF40A-205ENST00000467114 A0A1B0GUT8 65 aa-0.06□□□□□ -2.42
PRPF40A-205ENST00000467114 PVALEFA0A1B0GWK0 134 aa-0.06□□□□□ -2.42
PRPF40A-205ENST00000467114 K7EP34 96 aa-0.06□□□□□ -2.42
PRPF40A-205ENST00000467114 TTC37Q6PGP7 1564 aa-0.06□□□□□ -2.42
PRPF40A-205ENST00000467114 DCHS2Q6V1P9 2916 aa-0.07□□□□□ -2.42
PRPF40A-205ENST00000467114 WNK1Q9H4A3 2382 aa-0.07□□□□□ -2.42
PRPF40A-205ENST00000467114 IQCF6A8MYZ5 107 aa-0.07□□□□□ -2.42
PRPF40A-205ENST00000467114 CCL22O00626 93 aa-0.07□□□□□ -2.42
PRPF40A-205ENST00000467114 LRP2P98164 4655 aa-0.07□□□□□ -2.42
PRPF40A-205ENST00000467114 PLIN4Q96Q06 1357 aa-0.07□□□□□ -2.42
PRPF40A-205ENST00000467114 MYO3AQ8NEV4 1616 aa-0.08□□□□□ -2.42
PRPF40A-205ENST00000467114 EP300Q09472 2414 aaPredicted RBP-0.08□□□□□ -2.42
PRPF40A-205ENST00000467114 RGPD4Q7Z3J3 1758 aa-0.08□□□□□ -2.42
PRPF40A-205ENST00000467114 CYB5AP00167 134 aa-0.08□□□□□ -2.42
PRPF40A-205ENST00000467114 HEPN1Q6WQI6 88 aa-0.08□□□□□ -2.42
PRPF40A-205ENST00000467114 CLIP1P30622 1438 aa-0.08□□□□□ -2.42
PRPF40A-205ENST00000467114 UBR1Q8IWV7 1749 aa-0.08□□□□□ -2.42
PRPF40A-205ENST00000467114 COL14A1Q05707 1796 aaKnown RBP-0.09□□□□□ -2.42
PRPF40A-205ENST00000467114 HECTD4Q9Y4D8 3996 aa-0.09□□□□□ -2.42
PRPF40A-205ENST00000467114 M0R2T5 61 aa-0.09□□□□□ -2.42
PRPF40A-205ENST00000467114 FLNAP21333 2647 aaKnown RBP-0.09□□□□□ -2.42
PRPF40A-205ENST00000467114 SETXQ7Z333 2677 aaKnown RBP-0.1□□□□□ -2.42
PRPF40A-205ENST00000467114 PKD1L3Q7Z443 1732 aa-0.1□□□□□ -2.42
PRPF40A-205ENST00000467114 FSIP2Q5CZC0 6907 aa-0.1□□□□□ -2.43
PRPF40A-205ENST00000467114 MYMXA0A1B0GTQ4 84 aa-0.1□□□□□ -2.43
PRPF40A-205ENST00000467114 COX7BP24311 80 aa-0.1□□□□□ -2.43
PRPF40A-205ENST00000467114 SNRPFP62306 86 aaKnown RBP-0.1□□□□□ -2.43
PRPF40A-205ENST00000467114 C9orf62Q8N4C0 152 aa-0.1□□□□□ -2.43
PRPF40A-205ENST00000467114 LRRC7Q96NW7 1537 aa-0.1□□□□□ -2.43
PRPF40A-205ENST00000467114 RGPD3A6NKT7 1758 aaPredicted RBP-0.1□□□□□ -2.43
PRPF40A-205ENST00000467114 UBR3Q6ZT12 1888 aa-0.1□□□□□ -2.43
PRPF40A-205ENST00000467114 MAGI2Q86UL8 1455 aa-0.1□□□□□ -2.43
PRPF40A-205ENST00000467114 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.1□□□□□ -2.434e-8■■■■■ 49.1
PRPF40A-205ENST00000467114 RGPD2P0DJD1 1756 aa-0.11□□□□□ -2.43
PRPF40A-205ENST00000467114 TDRG1Q3Y452 100 aa-0.11□□□□□ -2.43
PRPF40A-205ENST00000467114 GAFA1Q96PS6 74 aa-0.11□□□□□ -2.43
PRPF40A-205ENST00000467114 CDKN2A-AS1Q9UH64 79 aa-0.11□□□□□ -2.43
PRPF40A-205ENST00000467114 APC2O95996 2303 aa-0.12□□□□□ -2.43
PRPF40A-205ENST00000467114 RGPD1P0DJD0 1748 aa-0.12□□□□□ -2.43
PRPF40A-205ENST00000467114 TRAV21A0A0B4J279 112 aa-0.12□□□□□ -2.43
PRPF40A-205ENST00000467114 GNG2P59768 71 aa-0.12□□□□□ -2.43
PRPF40A-205ENST00000467114 LINC00643Q86TS7 51 aa-0.12□□□□□ -2.43
PRPF40A-205ENST00000467114 RABAC1Q9UI14 185 aa-0.12□□□□□ -2.43
PRPF40A-205ENST00000467114 ATP7BP35670 1465 aa-0.12□□□□□ -2.43
PRPF40A-205ENST00000467114 REV3LO60673 3130 aa-0.12□□□□□ -2.43
PRPF40A-205ENST00000467114 ABCC3O15438 1527 aa-0.13□□□□□ -2.43
PRPF40A-205ENST00000467114 ALKQ9UM73 1620 aa-0.13□□□□□ -2.43
PRPF40A-205ENST00000467114 STAB1Q9NY15 2570 aa-0.13□□□□□ -2.43
PRPF40A-205ENST00000467114 SMARCA2P51531 1590 aa-0.13□□□□□ -2.43
PRPF40A-205ENST00000467114 WFDC13Q8IUB5 93 aa-0.13□□□□□ -2.43
PRPF40A-205ENST00000467114 SSPOA2VEC9 5147 aa-0.13□□□□□ -2.43
PRPF40A-205ENST00000467114 TENM2Q9NT68 2774 aa-0.14□□□□□ -2.43
PRPF40A-205ENST00000467114 RPL38P63173 70 aaKnown RBP-0.14□□□□□ -2.43
PRPF40A-205ENST00000467114 DEFB135Q30KP9 77 aa-0.14□□□□□ -2.43
PRPF40A-205ENST00000467114 WFDC9Q8NEX5 89 aa-0.14□□□□□ -2.43
PRPF40A-205ENST00000467114 COL6A3P12111 3177 aa-0.14□□□□□ -2.43
PRPF40A-205ENST00000467114 BCORQ6W2J9 1755 aa-0.14□□□□□ -2.43
PRPF40A-205ENST00000467114 TMEM131LA2VDJ0 1609 aa-0.15□□□□□ -2.43
PRPF40A-205ENST00000467114 CEBPZOSA8MTT3 80 aa-0.15□□□□□ -2.43
PRPF40A-205ENST00000467114 ACYP1P07311 99 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms