RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 PGPEP1Q9NXJ5 209 aa9.22□□□□□ -0.93
HDAC6-215ENST00000465457 IGLV10-54A0A075B6I4 117 aa9.21□□□□□ -0.94
HDAC6-215ENST00000465457 COX17Q14061 63 aa9.21□□□□□ -0.94
HDAC6-215ENST00000465457 UPK3BQ9BT76 320 aa9.21□□□□□ -0.94
HDAC6-215ENST00000465457 SPCS1Q9Y6A9 102 aa9.21□□□□□ -0.94
HDAC6-215ENST00000465457 SMR3BP02814 79 aaPredicted RBP9.2□□□□□ -0.94
HDAC6-215ENST00000465457 HAMPP81172 84 aa9.2□□□□□ -0.94
HDAC6-215ENST00000465457 TSPAN13O95857 204 aa9.19□□□□□ -0.94
HDAC6-215ENST00000465457 ERG28Q9UKR5 140 aa9.19□□□□□ -0.94
HDAC6-215ENST00000465457 LINC00158P58513 81 aa9.18□□□□□ -0.94
HDAC6-215ENST00000465457 SPAG11BQ08648 103 aa9.18□□□□□ -0.94
HDAC6-215ENST00000465457 KIAA0087Q14695 138 aa9.18□□□□□ -0.94
HDAC6-215ENST00000465457 C1orf43Q9BWL3 253 aa9.18□□□□□ -0.94
HDAC6-215ENST00000465457 F8WDY8 70 aa9.17□□□□□ -0.94
HDAC6-215ENST00000465457 J3QL48 77 aa9.17□□□□□ -0.94
HDAC6-215ENST00000465457 RMI2Q96E14 147 aa9.17□□□□□ -0.94
HDAC6-215ENST00000465457 LRP1Q07954 4544 aaKnown RBP9.16□□□□□ -0.94
HDAC6-215ENST00000465457 TRBV20-1A0A075B6N2 111 aa9.16□□□□□ -0.94
HDAC6-215ENST00000465457 KRTAP10-1P60331 282 aa9.16□□□□□ -0.94
HDAC6-215ENST00000465457 MIR7-3HGQ8N6C7 128 aa9.16□□□□□ -0.94
HDAC6-215ENST00000465457 DAND5Q8N907 189 aa9.16□□□□□ -0.94
HDAC6-215ENST00000465457 NAA38Q9BRA0 125 aaKnown RBP9.16□□□□□ -0.94
HDAC6-215ENST00000465457 GVQW2A0A096LPI5 108 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-215ENST00000465457 A0A0U1RRA0 63 aa9.14□□□□□ -0.95
HDAC6-215ENST00000465457 NPC2P61916 151 aa9.14□□□□□ -0.95
HDAC6-215ENST00000465457 Q1RN00 199 aa9.14□□□□□ -0.95
HDAC6-215ENST00000465457 Q6ZRN7 208 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-215ENST00000465457 TRAV13-2A0A0B4J235 113 aa9.13□□□□□ -0.95
HDAC6-215ENST00000465457 LOC107984156A0A0G2JMH3 177 aa9.13□□□□□ -0.95
HDAC6-215ENST00000465457 TRBV30A0A0K0K1B3 111 aa9.13□□□□□ -0.95
HDAC6-215ENST00000465457 COX6CP09669 75 aa9.13□□□□□ -0.95
HDAC6-215ENST00000465457 PFN2P35080 140 aa9.13□□□□□ -0.95
HDAC6-215ENST00000465457 PSMB2P49721 201 aa9.13□□□□□ -0.95
HDAC6-215ENST00000465457 KRTAP26-1Q6PEX3 210 aa9.13□□□□□ -0.95
HDAC6-215ENST00000465457 C2orf82Q6UX34 121 aa9.13□□□□□ -0.95
HDAC6-215ENST00000465457 ARL17AQ8IVW1 177 aa9.13□□□□□ -0.95
HDAC6-215ENST00000465457 EIF4EBP3O60516 100 aaPredicted RBP9.12□□□□□ -0.95
HDAC6-215ENST00000465457 SOSTDC1Q6X4U4 206 aa9.12□□□□□ -0.95
HDAC6-215ENST00000465457 C2orf48Q96LS8 159 aa9.12□□□□□ -0.95
HDAC6-215ENST00000465457 SND1-IT1Q9HBX3 110 aa9.12□□□□□ -0.95
HDAC6-215ENST00000465457 IGKV2D-24A0A075B6R9 120 aa9.11□□□□□ -0.95
HDAC6-215ENST00000465457 ZNF561-AS1K7EIQ3 104 aa9.11□□□□□ -0.95
HDAC6-215ENST00000465457 RPL13AP40429 203 aaKnown RBP9.11□□□□□ -0.95
HDAC6-215ENST00000465457 NTN5Q8WTR8 489 aaPredicted RBP9.11□□□□□ -0.95
HDAC6-215ENST00000465457 SCGB1C2P0DMR2 95 aa9.1□□□□□ -0.95
HDAC6-215ENST00000465457 TTC32Q5I0X7 151 aa9.1□□□□□ -0.95
HDAC6-215ENST00000465457 DNAH8Q96JB1 4490 aa9.09□□□□□ -0.95
HDAC6-215ENST00000465457 NDUFC2O95298 119 aa9.09□□□□□ -0.95
HDAC6-215ENST00000465457 F8W1H4 67 aa9.08□□□□□ -0.96
HDAC6-215ENST00000465457 H7C2G1 150 aa9.08□□□□□ -0.96
HDAC6-215ENST00000465457 FAT3Q8TDW7 4589 aa9.08□□□□□ -0.96
HDAC6-215ENST00000465457 CAMK2N2Q96S95 79 aa9.07□□□□□ -0.96
HDAC6-215ENST00000465457 TRIAP1O43715 76 aa9.06□□□□□ -0.96
HDAC6-215ENST00000465457 ATXN8Q156A1 80 aa9.06□□□□□ -0.96
HDAC6-215ENST00000465457 UNQ6190/PRO20217Q6UXQ8 127 aa9.06□□□□□ -0.96
HDAC6-215ENST00000465457 C15orf56Q8N910 161 aa9.06□□□□□ -0.96
HDAC6-215ENST00000465457 Q9HAA7 133 aa9.06□□□□□ -0.96
HDAC6-215ENST00000465457 H3BMG7 143 aa9.05□□□□□ -0.96
HDAC6-215ENST00000465457 RNF213Q63HN8 5207 aa9.05□□□□□ -0.96
HDAC6-215ENST00000465457 KRTAP29-1A8MX34 341 aaPredicted RBP9.04□□□□□ -0.96
HDAC6-215ENST00000465457 FAM229AH3BQW9 127 aa9.04□□□□□ -0.96
HDAC6-215ENST00000465457 TCL1BO95988 128 aa9.03□□□□□ -0.96
HDAC6-215ENST00000465457 RPL28P46779 137 aaKnown RBP9.03□□□□□ -0.96
HDAC6-215ENST00000465457 RNF151Q2KHN1 245 aa9.03□□□□□ -0.96
HDAC6-215ENST00000465457 HIGD2BQ4VC39 106 aa9.03□□□□□ -0.96
HDAC6-215ENST00000465457 C10orf25Q5T742 122 aa9.03□□□□□ -0.96
HDAC6-215ENST00000465457 C6orf48Q9UBA6 75 aa9.03□□□□□ -0.96
HDAC6-215ENST00000465457 IGKV2-28A0A075B6P5 120 aa9.02□□□□□ -0.97
HDAC6-215ENST00000465457 IGKV2D-28P01615 120 aa9.02□□□□□ -0.97
HDAC6-215ENST00000465457 A0A087WTM6 91 aa9.01□□□□□ -0.97
HDAC6-215ENST00000465457 M0QXV9 152 aa9.01□□□□□ -0.97
HDAC6-215ENST00000465457 SYCNQ0VAF6 134 aa9.01□□□□□ -0.97
HDAC6-215ENST00000465457 LINC00337Q8N6G1 96 aa9.01□□□□□ -0.97
HDAC6-215ENST00000465457 TRBV10-2A0A0K0K1G8 114 aa9□□□□□ -0.97
HDAC6-215ENST00000465457 NDUFC2-KCTD14E9PQ53 114 aa9□□□□□ -0.97
HDAC6-215ENST00000465457 C9orf116Q5BN46 136 aaPredicted RBP9□□□□□ -0.97
HDAC6-215ENST00000465457 SERTAD4-AS1Q5TG53 156 aa9□□□□□ -0.97
HDAC6-215ENST00000465457 TMEM126AQ9H061 195 aa9□□□□□ -0.97
HDAC6-215ENST00000465457 PLA2G2DQ9UNK4 145 aa9□□□□□ -0.97
HDAC6-215ENST00000465457 USP17L23D6RBM5 183 aa8.99□□□□□ -0.97
HDAC6-215ENST00000465457 Q6ZRU5 148 aa8.99□□□□□ -0.97
HDAC6-215ENST00000465457 LINC00526Q96FQ7 95 aa8.99□□□□□ -0.97
HDAC6-215ENST00000465457 PRO0461Q9UI25 63 aa8.99□□□□□ -0.97
HDAC6-215ENST00000465457 H0YGX0 51 aa8.98□□□□□ -0.97
HDAC6-215ENST00000465457 LST1O00453 97 aa8.98□□□□□ -0.97
HDAC6-215ENST00000465457 OR13C6PQ8NH95 151 aa8.98□□□□□ -0.97
HDAC6-215ENST00000465457 CARD19Q96LW7 228 aa8.98□□□□□ -0.97
HDAC6-215ENST00000465457 CBY1Q9Y3M2 126 aa8.98□□□□□ -0.97
HDAC6-215ENST00000465457 LINC01620Q4KN68 170 aa8.97□□□□□ -0.97
HDAC6-215ENST00000465457 C14orf177Q52M58 125 aa8.97□□□□□ -0.97
HDAC6-215ENST00000465457 LINC01600Q96MT4 127 aa8.97□□□□□ -0.97
HDAC6-215ENST00000465457 FAM30AQ9NZY2 134 aa8.97□□□□□ -0.97
HDAC6-215ENST00000465457 K7ERU9 68 aa8.96□□□□□ -0.98
HDAC6-215ENST00000465457 TLX1NBP0CAT3 122 aa8.96□□□□□ -0.98
HDAC6-215ENST00000465457 H3BT86 120 aa8.95□□□□□ -0.98
HDAC6-215ENST00000465457 PSCAO43653 123 aa8.95□□□□□ -0.98
HDAC6-215ENST00000465457 TRACP01848 142 aa8.95□□□□□ -0.98
HDAC6-215ENST00000465457 S100A7L2Q5SY68 101 aa8.95□□□□□ -0.98
HDAC6-215ENST00000465457 SMIM11BQ8TCY0 68 aa8.95□□□□□ -0.98
HDAC6-215ENST00000465457 C9JAW5 83 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms