RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 H3BVH4 76 aa1.18□□□□□ -2.22
USP25-207ENST00000464435 S100ZQ8WXG8 99 aa1.18□□□□□ -2.22
USP25-207ENST00000464435 FAM103A1Q9BTL3 118 aaKnown RBP1.18□□□□□ -2.22
USP25-207ENST00000464435 PRO0255Q9UI72 69 aa1.18□□□□□ -2.22
USP25-207ENST00000464435 ASXL1Q8IXJ9 1541 aa1.18□□□□□ -2.22
USP25-207ENST00000464435 LAMC1P11047 1609 aa1.18□□□□□ -2.22
USP25-207ENST00000464435 PAPPAQ13219 1627 aa1.18□□□□□ -2.22
USP25-207ENST00000464435 ITSN1Q15811 1721 aa1.18□□□□□ -2.22
USP25-207ENST00000464435 LMTK2Q8IWU2 1503 aa1.17□□□□□ -2.22
USP25-207ENST00000464435 RPL38P63173 70 aaKnown RBP1.17□□□□□ -2.22
USP25-207ENST00000464435 ABCA9Q8IUA7 1624 aa1.17□□□□□ -2.22
USP25-207ENST00000464435 USP32Q8NFA0 1604 aa1.17□□□□□ -2.22
USP25-207ENST00000464435 POLR1AO95602 1720 aaPredicted RBP1.17□□□□□ -2.22
USP25-207ENST00000464435 CICQ96RK0 1608 aaPredicted RBP1.16□□□□□ -2.22
USP25-207ENST00000464435 EIF2AK4Q9P2K8 1649 aaKnown RBP1.16□□□□□ -2.22
USP25-207ENST00000464435 QSER1Q2KHR3 1735 aa1.16□□□□□ -2.22
USP25-207ENST00000464435 A0A087WWC5 75 aa1.16□□□□□ -2.22
USP25-207ENST00000464435 FXYD6-FXYD2A0A087WZ82 144 aa1.16□□□□□ -2.22
USP25-207ENST00000464435 GNG13Q9P2W3 67 aa1.16□□□□□ -2.22
USP25-207ENST00000464435 CD163L1Q9NR16 1453 aa1.16□□□□□ -2.22
USP25-207ENST00000464435 TIAM1Q13009 1591 aa1.16□□□□□ -2.22
USP25-207ENST00000464435 CDC42BPGQ6DT37 1551 aa1.16□□□□□ -2.22
USP25-207ENST00000464435 ZNF831Q5JPB2 1677 aa1.16□□□□□ -2.22
USP25-207ENST00000464435 UBR3Q6ZT12 1888 aa1.16□□□□□ -2.22
USP25-207ENST00000464435 SLIT1O75093 1534 aa1.15□□□□□ -2.22
USP25-207ENST00000464435 TIAM2Q8IVF5 1701 aa1.15□□□□□ -2.22
USP25-207ENST00000464435 ANKRD17O75179 2603 aaKnown RBP1.15□□□□□ -2.23
USP25-207ENST00000464435 COX8AP10176 69 aa1.15□□□□□ -2.23
USP25-207ENST00000464435 COX7BP24311 80 aa1.15□□□□□ -2.23
USP25-207ENST00000464435 NREPQ16612 68 aa1.15□□□□□ -2.23
USP25-207ENST00000464435 HILPDAQ9Y5L2 63 aa1.15□□□□□ -2.23
USP25-207ENST00000464435 COL14A1Q05707 1796 aaKnown RBP1.15□□□□□ -2.23
USP25-207ENST00000464435 ANKRD50Q9ULJ7 1429 aa1.15□□□□□ -2.23
USP25-207ENST00000464435 SPTY2D1-AS1A0A0U1RR47 76 aa1.14□□□□□ -2.23
USP25-207ENST00000464435 I3L2K1 104 aa1.14□□□□□ -2.23
USP25-207ENST00000464435 IFI6P09912 130 aa1.14□□□□□ -2.23
USP25-207ENST00000464435 USMG5Q96IX5 58 aa1.14□□□□□ -2.23
USP25-207ENST00000464435 WIZO95785 1651 aa1.13□□□□□ -2.23
USP25-207ENST00000464435 ATXN8Q156A1 80 aa1.13□□□□□ -2.23
USP25-207ENST00000464435 Q8IZM0 81 aa1.13□□□□□ -2.23
USP25-207ENST00000464435 BCORQ6W2J9 1755 aa1.13□□□□□ -2.23
USP25-207ENST00000464435 NHSQ6T4R5 1651 aa1.13□□□□□ -2.23
USP25-207ENST00000464435 PARP4Q9UKK3 1724 aaKnown RBP1.12□□□□□ -2.23
USP25-207ENST00000464435 CRIPTQ9P021 101 aa1.12□□□□□ -2.23
USP25-207ENST00000464435 FAM208BQ5VWN6 2430 aa1.12□□□□□ -2.23
USP25-207ENST00000464435 AHCTF1Q8WYP5 2266 aa1.12□□□□□ -2.23
USP25-207ENST00000464435 PRB3Q04118 309 aaPredicted RBP1.11□□□□□ -2.23
USP25-207ENST00000464435 RALGAPBQ86X10 1494 aa1.11□□□□□ -2.23
USP25-207ENST00000464435 RICTORQ6R327 1708 aa1.1□□□□□ -2.23
USP25-207ENST00000464435 DOT1LQ8TEK3 1739 aa1.1□□□□□ -2.23
USP25-207ENST00000464435 I3L3M4 83 aa1.1□□□□□ -2.23
USP25-207ENST00000464435 THOC2Q8NI27 1593 aaKnown RBP1.09□□□□□ -2.23
USP25-207ENST00000464435 SFTA3P0C7M3 94 aa1.09□□□□□ -2.23
USP25-207ENST00000464435 HMGA1P17096 107 aaKnown RBP1.09□□□□□ -2.23
USP25-207ENST00000464435 SMIM5Q71RC9 77 aa1.09□□□□□ -2.23
USP25-207ENST00000464435 DEFB123Q8N688 67 aa1.09□□□□□ -2.23
USP25-207ENST00000464435 ASH1LQ9NR48 2969 aaKnown RBP1.09□□□□□ -2.24
USP25-207ENST00000464435 PREX1Q8TCU6 1659 aa1.09□□□□□ -2.24
USP25-207ENST00000464435 NWD1Q149M9 1564 aa1.08□□□□□ -2.24
USP25-207ENST00000464435 LCE6AA0A183 80 aa1.08□□□□□ -2.24
USP25-207ENST00000464435 K7EQZ3 153 aa1.08□□□□□ -2.24
USP25-207ENST00000464435 DIP2AQ14689 1571 aa1.08□□□□□ -2.24
USP25-207ENST00000464435 CPSF4LA6NMK7 179 aaKnown RBP1.07□□□□□ -2.24
USP25-207ENST00000464435 NDUFA4O00483 81 aa1.07□□□□□ -2.24
USP25-207ENST00000464435 C3orf79P0CE67 100 aa1.07□□□□□ -2.24
USP25-207ENST00000464435 COX6B1P14854 86 aa1.07□□□□□ -2.24
USP25-207ENST00000464435 BIVM-ERCC5R4GMW8 1640 aa1.07□□□□□ -2.24
USP25-207ENST00000464435 NRAPQ86VF7 1730 aa1.06□□□□□ -2.24
USP25-207ENST00000464435 GOLGA4Q13439 2230 aaKnown RBP1.06□□□□□ -2.24
USP25-207ENST00000464435 FMN2Q9NZ56 1722 aa1.06□□□□□ -2.24
USP25-207ENST00000464435 EEA1Q15075 1411 aa1.06□□□□□ -2.24
USP25-207ENST00000464435 PLXNC1O60486 1568 aa1.05□□□□□ -2.24
USP25-207ENST00000464435 NESP48681 1621 aa1.05□□□□□ -2.24
USP25-207ENST00000464435 PREX2Q70Z35 1606 aa1.05□□□□□ -2.24
USP25-207ENST00000464435 ABCA6Q8N139 1617 aa1.05□□□□□ -2.24
USP25-207ENST00000464435 UBL5Q9BZL1 73 aa1.04□□□□□ -2.24
USP25-207ENST00000464435 URB1O60287 2271 aaKnown RBP1.04□□□□□ -2.24
USP25-207ENST00000464435 ABCA10Q8WWZ4 1543 aa1.04□□□□□ -2.24
USP25-207ENST00000464435 TNRC6CQ9HCJ0 1690 aaKnown RBP1.04□□□□□ -2.24
USP25-207ENST00000464435 TSC2P49815 1807 aa1.03□□□□□ -2.24
USP25-207ENST00000464435 CCL22O00626 93 aa1.03□□□□□ -2.24
USP25-207ENST00000464435 KRTAP5-10Q6L8G5 202 aa1.03□□□□□ -2.24
USP25-207ENST00000464435 ENHOQ6UWT2 76 aa1.03□□□□□ -2.24
USP25-207ENST00000464435 MRPL34Q9BQ48 92 aaKnown RBP1.03□□□□□ -2.24
USP25-207ENST00000464435 PIEZO2Q9H5I5 2752 aa1.02□□□□□ -2.25
USP25-207ENST00000464435 DDX60LQ5H9U9 1706 aaKnown RBP1.02□□□□□ -2.25
USP25-207ENST00000464435 PRXQ9BXM0 1461 aa1.02□□□□□ -2.25
USP25-207ENST00000464435 FBN2P35556 2912 aa1.02□□□□□ -2.25
USP25-207ENST00000464435 ZNF462Q96JM2 2506 aa1.01□□□□□ -2.25
USP25-207ENST00000464435 Q5VSD8 79 aa1.01□□□□□ -2.25
USP25-207ENST00000464435 FXYD6Q9H0Q3 95 aa1.01□□□□□ -2.25
USP25-207ENST00000464435 CACNA1EQ15878 2313 aa1□□□□□ -2.25
USP25-207ENST00000464435 NOTCH1P46531 2555 aa1□□□□□ -2.25
USP25-207ENST00000464435 LINC01549A6NIU2 74 aa1□□□□□ -2.25
USP25-207ENST00000464435 ALS2Q96Q42 1657 aa1□□□□□ -2.25
USP25-207ENST00000464435 ABCC6O95255 1503 aa0.99□□□□□ -2.25
USP25-207ENST00000464435 PLCE1Q9P212 2302 aa0.99□□□□□ -2.25
USP25-207ENST00000464435 MRPL33O75394 65 aaKnown RBP0.99□□□□□ -2.25
USP25-207ENST00000464435 MAST1Q9Y2H9 1570 aa0.99□□□□□ -2.25
USP25-207ENST00000464435 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms