RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 LY6G6DO95868 133 aa8.54□□□□□ -1.04
HDAC4-208ENST00000463007 C4orf26Q17RF5 130 aa8.54□□□□□ -1.04
HDAC4-208ENST00000463007 BAHCC1Q9P281 2608 aa8.54□□□□□ -1.04
HDAC4-208ENST00000463007 C10orf25Q5T742 122 aa8.53□□□□□ -1.04
HDAC4-208ENST00000463007 NANOS2P60321 138 aaKnown RBP8.53□□□□□ -1.04
HDAC4-208ENST00000463007 UNQ6190/PRO20217Q6UXQ8 127 aa8.53□□□□□ -1.04
HDAC4-208ENST00000463007 CHCHD10Q8WYQ3 142 aaPredicted RBP8.53□□□□□ -1.04
HDAC4-208ENST00000463007 DEFB135Q30KP9 77 aa8.53□□□□□ -1.04
HDAC4-208ENST00000463007 UPK3BQ9BT76 320 aa8.52□□□□□ -1.05
HDAC4-208ENST00000463007 UBL5Q9BZL1 73 aa8.52□□□□□ -1.05
HDAC4-208ENST00000463007 NSD1Q96L73 2696 aaPredicted RBP8.52□□□□□ -1.05
HDAC4-208ENST00000463007 TRRAPQ9Y4A5 3859 aa8.52□□□□□ -1.05
HDAC4-208ENST00000463007 SNURFQ9Y675 71 aa8.51□□□□□ -1.05
HDAC4-208ENST00000463007 DPH3Q96FX2 82 aa8.51□□□□□ -1.05
HDAC4-208ENST00000463007 OXTP01178 125 aa8.51□□□□□ -1.05
HDAC4-208ENST00000463007 TMEM256-PLSCR3K7ERE1 68 aa8.5□□□□□ -1.05
HDAC4-208ENST00000463007 REG3AQ06141 175 aa8.5□□□□□ -1.05
HDAC4-208ENST00000463007 X6R8D5 127 aa8.5□□□□□ -1.05
HDAC4-208ENST00000463007 Q6ZQY7 126 aa8.49□□□□□ -1.05
HDAC4-208ENST00000463007 RBM3P98179 157 aaKnown RBP8.49□□□□□ -1.05
HDAC4-208ENST00000463007 Q8IZM0 81 aa8.49□□□□□ -1.05
HDAC4-208ENST00000463007 OBSCN-AS1Q96MR7 158 aa8.49□□□□□ -1.05
HDAC4-208ENST00000463007 KLK12Q9UKR0 248 aa8.49□□□□□ -1.05
HDAC4-208ENST00000463007 JMJD7-PLA2G4BH0Y9G9 81 aa8.48□□□□□ -1.05
HDAC4-208ENST00000463007 PRO0255Q9UI72 69 aa8.47□□□□□ -1.05
HDAC4-208ENST00000463007 SPAG11BQ08648 103 aa8.46□□□□□ -1.05
HDAC4-208ENST00000463007 C1orf43Q9BWL3 253 aa8.46□□□□□ -1.05
HDAC4-208ENST00000463007 TRAV10A0A0B4J240 114 aa8.45□□□□□ -1.06
HDAC4-208ENST00000463007 TMEM258P61165 79 aa8.45□□□□□ -1.06
HDAC4-208ENST00000463007 KIAA0087Q14695 138 aa8.45□□□□□ -1.06
HDAC4-208ENST00000463007 NOTCH1P46531 2555 aa8.45□□□□□ -1.06
HDAC4-208ENST00000463007 CMYA5Q8N3K9 4069 aa8.45□□□□□ -1.06
HDAC4-208ENST00000463007 CYSRT1A8MQ03 144 aa8.45□□□□□ -1.06
HDAC4-208ENST00000463007 INAFM1C9JVW0 142 aa8.45□□□□□ -1.06
HDAC4-208ENST00000463007 HIGD2BQ4VC39 106 aa8.45□□□□□ -1.06
HDAC4-208ENST00000463007 CD164L2Q6UWJ8 174 aa8.45□□□□□ -1.06
HDAC4-208ENST00000463007 PKIGQ9Y2B9 76 aa8.45□□□□□ -1.06
HDAC4-208ENST00000463007 Q8N9L7 120 aa8.44□□□□□ -1.06
HDAC4-208ENST00000463007 WIPF1O43516 503 aa8.43□□□□□ -1.06
HDAC4-208ENST00000463007 DAD1P61803 113 aa8.43□□□□□ -1.06
HDAC4-208ENST00000463007 LINC00575Q6W349 94 aa8.43□□□□□ -1.06
HDAC4-208ENST00000463007 TRBV10-3A0A0K0K1G6 114 aa8.42□□□□□ -1.06
HDAC4-208ENST00000463007 RMI2Q96E14 147 aa8.42□□□□□ -1.06
HDAC4-208ENST00000463007 CELA1Q9UNI1 258 aa8.42□□□□□ -1.06
HDAC4-208ENST00000463007 NBEAL1Q6ZS30 2694 aa8.42□□□□□ -1.06
HDAC4-208ENST00000463007 LINC01547P58512 204 aaPredicted RBP8.41□□□□□ -1.06
HDAC4-208ENST00000463007 C9orf66Q5T8R8 295 aa8.41□□□□□ -1.06
HDAC4-208ENST00000463007 A0A1B0GUV1 79 aa8.41□□□□□ -1.06
HDAC4-208ENST00000463007 FLNBO75369 2602 aaKnown RBP8.41□□□□□ -1.06
HDAC4-208ENST00000463007 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.4□□□□□ -1.06
HDAC4-208ENST00000463007 Q6ZVQ6 151 aa8.4□□□□□ -1.06
HDAC4-208ENST00000463007 FBN1P35555 2871 aaKnown RBP8.4□□□□□ -1.06
HDAC4-208ENST00000463007 ANK2Q01484 3957 aa8.4□□□□□ -1.06
HDAC4-208ENST00000463007 Q6ZQT0 140 aa8.4□□□□□ -1.07
HDAC4-208ENST00000463007 DEFB105AQ8NG35 78 aa8.4□□□□□ -1.07
HDAC4-208ENST00000463007 DNAH3Q8TD57 4116 aa8.4□□□□□ -1.07
HDAC4-208ENST00000463007 MAST4O15021 2626 aa8.39□□□□□ -1.07
HDAC4-208ENST00000463007 IGHV4-28A0A0C4DH34 117 aa8.38□□□□□ -1.07
HDAC4-208ENST00000463007 TENM3Q9P273 2699 aa8.38□□□□□ -1.07
HDAC4-208ENST00000463007 LYRM9A8MSI8 78 aa8.38□□□□□ -1.07
HDAC4-208ENST00000463007 COL6A5A8TX70 2615 aa8.38□□□□□ -1.07
HDAC4-208ENST00000463007 RPS28P62857 69 aaKnown RBP8.37□□□□□ -1.07
HDAC4-208ENST00000463007 ZNF561-AS1K7EIQ3 104 aa8.37□□□□□ -1.07
HDAC4-208ENST00000463007 STAB1Q9NY15 2570 aa8.37□□□□□ -1.07
HDAC4-208ENST00000463007 FAM236DA0A1B0GTK5 79 aa8.36□□□□□ -1.07
HDAC4-208ENST00000463007 FAM236CP0DP71 79 aa8.36□□□□□ -1.07
HDAC4-208ENST00000463007 Q8NAQ8 132 aa8.36□□□□□ -1.07
HDAC4-208ENST00000463007 F8WEM9 126 aa8.36□□□□□ -1.07
HDAC4-208ENST00000463007 TM2D3Q9BRN9 247 aa8.36□□□□□ -1.07
HDAC4-208ENST00000463007 C3orf84H3BNL1 204 aa8.36□□□□□ -1.07
HDAC4-208ENST00000463007 NDUFC2O95298 119 aa8.36□□□□□ -1.07
HDAC4-208ENST00000463007 COX17Q14061 63 aa8.35□□□□□ -1.07
HDAC4-208ENST00000463007 DIRC1Q969H9 104 aa8.34□□□□□ -1.07
HDAC4-208ENST00000463007 LINC00167Q96N53 147 aa8.34□□□□□ -1.07
HDAC4-208ENST00000463007 MUC7Q8TAX7 377 aa8.34□□□□□ -1.07
HDAC4-208ENST00000463007 ATP5EP2Q5VTU8 51 aa8.33□□□□□ -1.08
HDAC4-208ENST00000463007 C6orf48Q9UBA6 75 aa8.33□□□□□ -1.08
HDAC4-208ENST00000463007 A0A0U1RQV1 116 aa8.33□□□□□ -1.08
HDAC4-208ENST00000463007 CAMK2N2Q96S95 79 aa8.33□□□□□ -1.08
HDAC4-208ENST00000463007 ZNF73O43830 326 aaPredicted RBP8.32□□□□□ -1.08
HDAC4-208ENST00000463007 Q5XG85 94 aa8.32□□□□□ -1.08
HDAC4-208ENST00000463007 H7BZZ5 65 aa8.32□□□□□ -1.08
HDAC4-208ENST00000463007 APOC4P55056 127 aa8.32□□□□□ -1.08
HDAC4-208ENST00000463007 MRAPQ8TCY5 172 aa8.32□□□□□ -1.08
HDAC4-208ENST00000463007 PRB2P02812 416 aaPredicted RBP8.31□□□□□ -1.08
HDAC4-208ENST00000463007 COX7BP24311 80 aa8.31□□□□□ -1.08
HDAC4-208ENST00000463007 LINC00336Q6ZUF6 198 aa8.31□□□□□ -1.08
HDAC4-208ENST00000463007 BPY2O14599 106 aa8.3□□□□□ -1.08
HDAC4-208ENST00000463007 MIFP14174 115 aa8.3□□□□□ -1.08
HDAC4-208ENST00000463007 TRAV7A0A075B6U4 112 aa8.3□□□□□ -1.08
HDAC4-208ENST00000463007 WFDC10BQ8IUB3 73 aa8.3□□□□□ -1.08
HDAC4-208ENST00000463007 LINC00474Q9P2X8 69 aa8.29□□□□□ -1.08
HDAC4-208ENST00000463007 IGLV6-57P01721 117 aa8.29□□□□□ -1.08
HDAC4-208ENST00000463007 MPLKIPQ8TAP9 179 aa8.28□□□□□ -1.08
HDAC4-208ENST00000463007 RETNQ9HD89 108 aa8.28□□□□□ -1.08
HDAC4-208ENST00000463007 IGHV4-30-4P0DP06 118 aa8.28□□□□□ -1.08
HDAC4-208ENST00000463007 LYPD5Q6UWN5 251 aa8.28□□□□□ -1.08
HDAC4-208ENST00000463007 Q6ZRU5 148 aa8.26□□□□□ -1.09
HDAC4-208ENST00000463007 LRCOL1A6NCL2 159 aa8.26□□□□□ -1.09
HDAC4-208ENST00000463007 SPART-AS1P0CW21 52 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms