RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 DCHS1Q96JQ0 3298 aa0.72□□□□□ -2.29
HDAC6-212ENST00000461608 EP300Q09472 2414 aaPredicted RBP0.72□□□□□ -2.29
HDAC6-212ENST00000461608 GVINP1Q7Z2Y8 2422 aa0.72□□□□□ -2.29
HDAC6-212ENST00000461608 TRBV25-1A0A075B6N4 114 aa0.72□□□□□ -2.29
HDAC6-212ENST00000461608 LOC285095A0A1B0GVY8 99 aa0.72□□□□□ -2.29
HDAC6-212ENST00000461608 C7orf77A4D0Y5 90 aa0.72□□□□□ -2.29
HDAC6-212ENST00000461608 F8WEM9 126 aa0.72□□□□□ -2.29
HDAC6-212ENST00000461608 ZNF137PP52743 207 aa0.72□□□□□ -2.29
HDAC6-212ENST00000461608 ADIRFQ15847 76 aa0.72□□□□□ -2.29
HDAC6-212ENST00000461608 PSMG4Q5JS54 123 aa0.72□□□□□ -2.29
HDAC6-212ENST00000461608 VMO1Q7Z5L0 202 aa0.72□□□□□ -2.29
HDAC6-212ENST00000461608 BAGE3Q86Y29 109 aa0.72□□□□□ -2.29
HDAC6-212ENST00000461608 BAGE2Q86Y30 109 aa0.72□□□□□ -2.29
HDAC6-212ENST00000461608 TSC2P49815 1807 aa0.72□□□□□ -2.29
HDAC6-212ENST00000461608 CNOT1A5YKK6 2376 aaKnown RBP0.72□□□□□ -2.29
HDAC6-212ENST00000461608 DNAH12Q6ZR08 3092 aa0.72□□□□□ -2.29
HDAC6-212ENST00000461608 ASCC3Q8N3C0 2202 aaKnown RBP0.72□□□□□ -2.29
HDAC6-212ENST00000461608 ACACBO00763 2458 aa0.72□□□□□ -2.29
HDAC6-212ENST00000461608 CEP250Q9BV73 2442 aa0.72□□□□□ -2.29
HDAC6-212ENST00000461608 BDP1A6H8Y1 2624 aa0.71□□□□□ -2.3
HDAC6-212ENST00000461608 PLIN4Q96Q06 1357 aa0.71□□□□□ -2.3
HDAC6-212ENST00000461608 CFAP54Q96N23 3096 aa0.71□□□□□ -2.3
HDAC6-212ENST00000461608 LAMA4Q16363 1823 aa0.71□□□□□ -2.3
HDAC6-212ENST00000461608 USP34Q70CQ2 3546 aa0.71□□□□□ -2.3
HDAC6-212ENST00000461608 FASNP49327 2511 aaKnown RBP0.71□□□□□ -2.3
HDAC6-212ENST00000461608 URB1O60287 2271 aaKnown RBP0.71□□□□□ -2.3
HDAC6-212ENST00000461608 CHD7Q9P2D1 2997 aa0.71□□□□□ -2.3
HDAC6-212ENST00000461608 F5P12259 2224 aa0.71□□□□□ -2.3
HDAC6-212ENST00000461608 KNTC1P50748 2209 aa0.71□□□□□ -2.3
HDAC6-212ENST00000461608 ASXL3Q9C0F0 2248 aa0.71□□□□□ -2.3
HDAC6-212ENST00000461608 CFAP126Q5VTH2 177 aa0.71□□□□□ -2.3
HDAC6-212ENST00000461608 PLAC4Q8WY50 150 aa0.71□□□□□ -2.3
HDAC6-212ENST00000461608 ST20Q9HBF5 79 aa0.71□□□□□ -2.3
HDAC6-212ENST00000461608 LINC01558Q9Y6Z2 57 aa0.71□□□□□ -2.3
HDAC6-212ENST00000461608 REV3LO60673 3130 aa0.71□□□□□ -2.3
HDAC6-212ENST00000461608 SPTBN2O15020 2390 aa0.71□□□□□ -2.3
HDAC6-212ENST00000461608 ESPL1Q14674 2120 aa0.71□□□□□ -2.3
HDAC6-212ENST00000461608 WDFY4Q6ZS81 3184 aa0.71□□□□□ -2.3
HDAC6-212ENST00000461608 GOLGA4Q13439 2230 aaKnown RBP0.7□□□□□ -2.3
HDAC6-212ENST00000461608 C5orf42Q9H799 3197 aa0.7□□□□□ -2.3
HDAC6-212ENST00000461608 XIRP2A4UGR9 3374 aa0.7□□□□□ -2.3
HDAC6-212ENST00000461608 ZGRF1Q86YA3 2104 aa0.7□□□□□ -2.3
HDAC6-212ENST00000461608 ACACAQ13085 2346 aa0.7□□□□□ -2.3
HDAC6-212ENST00000461608 TRANK1O15050 2925 aa0.7□□□□□ -2.3
HDAC6-212ENST00000461608 A0A087WVE0 104 aa0.7□□□□□ -2.3
HDAC6-212ENST00000461608 A0A1B0GWA3 101 aa0.7□□□□□ -2.3
HDAC6-212ENST00000461608 H3BUT2 72 aa0.7□□□□□ -2.3
HDAC6-212ENST00000461608 UQCR11O14957 56 aa0.7□□□□□ -2.3
HDAC6-212ENST00000461608 LEPROTL1O95214 131 aa0.7□□□□□ -2.3
HDAC6-212ENST00000461608 ARMS2P0C7Q2 107 aa0.7□□□□□ -2.3
HDAC6-212ENST00000461608 SAA2P0DJI9 122 aaPredicted RBP0.7□□□□□ -2.3
HDAC6-212ENST00000461608 DEFA5Q01523 94 aa0.7□□□□□ -2.3
HDAC6-212ENST00000461608 C6orf52Q5T4I8 152 aa0.7□□□□□ -2.3
HDAC6-212ENST00000461608 AMELXQ99217 191 aa0.7□□□□□ -2.3
HDAC6-212ENST00000461608 EPG5Q9HCE0 2579 aa0.7□□□□□ -2.3
HDAC6-212ENST00000461608 DNAH14Q0VDD8 3507 aa0.7□□□□□ -2.3
HDAC6-212ENST00000461608 NCOR2Q9Y618 2525 aa0.7□□□□□ -2.3
HDAC6-212ENST00000461608 ABCA4P78363 2273 aa0.69□□□□□ -2.3
HDAC6-212ENST00000461608 DOPEY2Q9Y3R5 2298 aa0.69□□□□□ -2.3
HDAC6-212ENST00000461608 MYO15AQ9UKN7 3530 aa0.69□□□□□ -2.3
HDAC6-212ENST00000461608 CHD8Q9HCK8 2581 aa0.69□□□□□ -2.3
HDAC6-212ENST00000461608 CHD9Q3L8U1 2897 aa0.69□□□□□ -2.3
HDAC6-212ENST00000461608 CACNA1EQ15878 2313 aa0.69□□□□□ -2.3
HDAC6-212ENST00000461608 A0A096LNT2 108 aa0.69□□□□□ -2.3
HDAC6-212ENST00000461608 IQCF6A8MYZ5 107 aa0.69□□□□□ -2.3
HDAC6-212ENST00000461608 F2Z2F3 143 aa0.69□□□□□ -2.3
HDAC6-212ENST00000461608 CD52P31358 61 aa0.69□□□□□ -2.3
HDAC6-212ENST00000461608 SMIM11AP58511 58 aa0.69□□□□□ -2.3
HDAC6-212ENST00000461608 FXYD6P3P58550 94 aa0.69□□□□□ -2.3
HDAC6-212ENST00000461608 PRB3Q04118 309 aaPredicted RBP0.69□□□□□ -2.3
HDAC6-212ENST00000461608 SPINK9Q5DT21 86 aa0.69□□□□□ -2.3
HDAC6-212ENST00000461608 BVES-AS1Q5T3Y7 98 aa0.69□□□□□ -2.3
HDAC6-212ENST00000461608 Q6ZRX8 168 aa0.69□□□□□ -2.3
HDAC6-212ENST00000461608 DEFB107AQ8IZN7 70 aa0.69□□□□□ -2.3
HDAC6-212ENST00000461608 RABAC1Q9UI14 185 aa0.69□□□□□ -2.3
HDAC6-212ENST00000461608 USP24Q9UPU5 2620 aa0.69□□□□□ -2.3
HDAC6-212ENST00000461608 CFAP47Q6ZTR5 3102 aa0.69□□□□□ -2.3
HDAC6-212ENST00000461608 AHCTF1Q8WYP5 2266 aa0.69□□□□□ -2.3
HDAC6-212ENST00000461608 CNTRLQ7Z7A1 2325 aa0.69□□□□□ -2.3
HDAC6-212ENST00000461608 PTPRQQ9UMZ3 2332 aa0.69□□□□□ -2.3
HDAC6-212ENST00000461608 NAV2Q8IVL1 2488 aa0.69□□□□□ -2.3
HDAC6-212ENST00000461608 TCHHQ07283 1943 aa0.68□□□□□ -2.3
HDAC6-212ENST00000461608 MED13LQ71F56 2210 aa0.68□□□□□ -2.3
HDAC6-212ENST00000461608 ZFHX4Q86UP3 3567 aa0.68□□□□□ -2.3
HDAC6-212ENST00000461608 GVQW2A0A096LPI5 108 aaPredicted RBP0.68□□□□□ -2.3
HDAC6-212ENST00000461608 KANTRA0A1W2PQU2 76 aa0.68□□□□□ -2.3
HDAC6-212ENST00000461608 D6R8Y8 96 aa0.68□□□□□ -2.3
HDAC6-212ENST00000461608 TRIOO75962 3097 aa0.68□□□□□ -2.3
HDAC6-212ENST00000461608 APC2O95996 2303 aa0.68□□□□□ -2.3
HDAC6-212ENST00000461608 MGPP08493 103 aa0.68□□□□□ -2.3
HDAC6-212ENST00000461608 IGLC2P0DOY2 106 aa0.68□□□□□ -2.3
HDAC6-212ENST00000461608 IGLC3P0DOY3 106 aa0.68□□□□□ -2.3
HDAC6-212ENST00000461608 GCHFRP30047 84 aa0.68□□□□□ -2.3
HDAC6-212ENST00000461608 SNRPFP62306 86 aaKnown RBP0.68□□□□□ -2.3
HDAC6-212ENST00000461608 HAMPP81172 84 aa0.68□□□□□ -2.3
HDAC6-212ENST00000461608 C10orf99Q6UWK7 81 aa0.68□□□□□ -2.3
HDAC6-212ENST00000461608 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.68□□□□□ -2.3
HDAC6-212ENST00000461608 LINC00643Q86TS7 51 aa0.68□□□□□ -2.3
HDAC6-212ENST00000461608 MUSTN1Q8IVN3 82 aa0.68□□□□□ -2.3
HDAC6-212ENST00000461608 DEFB124Q8NES8 71 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms