RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 UBE2AP49459 152 aa5.14□□□□□ -1.59
HDAC9-220ENST00000461409 TYMSOSQ8TAI1 123 aa5.14□□□□□ -1.59
HDAC9-220ENST00000461409 A0A087X002 238 aa5.13□□□□□ -1.59
HDAC9-220ENST00000461409 TSPAN13O95857 204 aa5.13□□□□□ -1.59
HDAC9-220ENST00000461409 RAB5BP61020 215 aa5.13□□□□□ -1.59
HDAC9-220ENST00000461409 SEC11CQ9BY50 192 aa5.13□□□□□ -1.59
HDAC9-220ENST00000461409 FABP9Q0Z7S8 132 aa5.12□□□□□ -1.59
HDAC9-220ENST00000461409 FAM229BQ4G0N7 80 aa5.12□□□□□ -1.59
HDAC9-220ENST00000461409 SFTA2Q6UW10 78 aa5.12□□□□□ -1.59
HDAC9-220ENST00000461409 IGLV5-39A0A0G2JS06 123 aa5.11□□□□□ -1.59
HDAC9-220ENST00000461409 A0A0U1RQV1 116 aa5.11□□□□□ -1.59
HDAC9-220ENST00000461409 IGLC3P0DOY3 106 aa5.11□□□□□ -1.59
HDAC9-220ENST00000461409 PFN2P35080 140 aa5.11□□□□□ -1.59
HDAC9-220ENST00000461409 KRTAP13-1Q8IUC0 172 aa5.11□□□□□ -1.59
HDAC9-220ENST00000461409 MUC2Q02817 5179 aa5.1□□□□□ -1.59
HDAC9-220ENST00000461409 IGKV2-28A0A075B6P5 120 aa5.1□□□□□ -1.59
HDAC9-220ENST00000461409 IGKV2D-28P01615 120 aa5.1□□□□□ -1.59
HDAC9-220ENST00000461409 NDUFA6P56556 154 aa5.1□□□□□ -1.59
HDAC9-220ENST00000461409 RPL24P83731 157 aaKnown RBP5.1□□□□□ -1.59
HDAC9-220ENST00000461409 COX17Q14061 63 aa5.1□□□□□ -1.59
HDAC9-220ENST00000461409 RHEBQ15382 184 aa5.1□□□□□ -1.59
HDAC9-220ENST00000461409 ZNF22P17026 224 aaPredicted RBP5.09□□□□□ -1.59
HDAC9-220ENST00000461409 SND1-IT1Q9HBX3 110 aa5.09□□□□□ -1.59
HDAC9-220ENST00000461409 ERG28Q9UKR5 140 aa5.09□□□□□ -1.59
HDAC9-220ENST00000461409 IGKV2D-26A0A0A0MRZ7 120 aa5.08□□□□□ -1.6
HDAC9-220ENST00000461409 TRIAP1O43715 76 aa5.08□□□□□ -1.6
HDAC9-220ENST00000461409 HBDP02042 147 aa5.08□□□□□ -1.6
HDAC9-220ENST00000461409 LINC00614P0C842 121 aa5.08□□□□□ -1.6
HDAC9-220ENST00000461409 VPREB1P12018 145 aa5.08□□□□□ -1.6
HDAC9-220ENST00000461409 CTAG1AP78358 180 aa5.08□□□□□ -1.6
HDAC9-220ENST00000461409 KRTAP13-2Q52LG2 175 aa5.08□□□□□ -1.6
HDAC9-220ENST00000461409 COMMD7Q86VX2 200 aa5.08□□□□□ -1.6
HDAC9-220ENST00000461409 LINC00304Q8N9R0 145 aa5.08□□□□□ -1.6
HDAC9-220ENST00000461409 TMEM126AQ9H061 195 aa5.08□□□□□ -1.6
HDAC9-220ENST00000461409 RPS10P5Q9NQ39 176 aa5.08□□□□□ -1.6
HDAC9-220ENST00000461409 ANAPC11Q9NYG5 84 aa5.08□□□□□ -1.6
HDAC9-220ENST00000461409 A0A096LNJ9 63 aa5.07□□□□□ -1.6
HDAC9-220ENST00000461409 SCO1O75880 301 aa5.07□□□□□ -1.6
HDAC9-220ENST00000461409 PRLHP81277 87 aa5.07□□□□□ -1.6
HDAC9-220ENST00000461409 C10orf91Q5T1B1 145 aa5.07□□□□□ -1.6
HDAC9-220ENST00000461409 TMEM170BQ5T4T1 132 aa5.07□□□□□ -1.6
HDAC9-220ENST00000461409 FAM19A1Q7Z5A9 133 aa5.07□□□□□ -1.6
HDAC9-220ENST00000461409 C18orf32Q8TCD1 76 aa5.07□□□□□ -1.6
HDAC9-220ENST00000461409 TMEM238C9JI98 176 aa5.06□□□□□ -1.6
HDAC9-220ENST00000461409 IFITM2Q01629 132 aa5.06□□□□□ -1.6
HDAC9-220ENST00000461409 BAGE3Q86Y29 109 aa5.06□□□□□ -1.6
HDAC9-220ENST00000461409 TRAPPC1Q9Y5R8 145 aa5.06□□□□□ -1.6
HDAC9-220ENST00000461409 C11orf86A6NJI1 115 aa5.05□□□□□ -1.6
HDAC9-220ENST00000461409 M0R378 163 aa5.05□□□□□ -1.6
HDAC9-220ENST00000461409 PMCHL1Q16048 86 aa5.05□□□□□ -1.6
HDAC9-220ENST00000461409 ZNF625Q96I27 306 aaPredicted RBP5.05□□□□□ -1.6
HDAC9-220ENST00000461409 LINC00158P58513 81 aa5.04□□□□□ -1.6
HDAC9-220ENST00000461409 CBLN2Q8IUK8 224 aa5.04□□□□□ -1.6
HDAC9-220ENST00000461409 PLEKHB2Q96CS7 222 aa5.04□□□□□ -1.6
HDAC9-220ENST00000461409 URB1-AS1Q96HZ7 61 aa5.04□□□□□ -1.6
HDAC9-220ENST00000461409 TPRXLQ17RH7 258 aa5.03□□□□□ -1.6
HDAC9-220ENST00000461409 RETNLBQ9BQ08 111 aa5.03□□□□□ -1.6
HDAC9-220ENST00000461409 HIGD2AQ9BW72 106 aa5.03□□□□□ -1.6
HDAC9-220ENST00000461409 CHTOPQ9Y3Y2 248 aaKnown RBP5.03□□□□□ -1.6
HDAC9-220ENST00000461409 ZNF706Q9Y5V0 76 aaPredicted RBP5.03□□□□□ -1.6
HDAC9-220ENST00000461409 IGLV7-46A0A075B6I9 117 aa5.02□□□□□ -1.61
HDAC9-220ENST00000461409 ATP6V1G1O75348 118 aa5.02□□□□□ -1.61
HDAC9-220ENST00000461409 NDUFA5Q16718 116 aa5.02□□□□□ -1.61
HDAC9-220ENST00000461409 SPAG11AQ6PDA7 123 aa5.02□□□□□ -1.61
HDAC9-220ENST00000461409 Q8NDZ9 215 aa5.02□□□□□ -1.61
HDAC9-220ENST00000461409 TRAV12-1A0A0B4J245 112 aa5.01□□□□□ -1.61
HDAC9-220ENST00000461409 TMEM223A0PJW6 202 aa5.01□□□□□ -1.61
HDAC9-220ENST00000461409 LINC00587B1AMM8 73 aa5.01□□□□□ -1.61
HDAC9-220ENST00000461409 SNAPINO95295 136 aa5.01□□□□□ -1.61
HDAC9-220ENST00000461409 SVBPQ8N300 66 aa5.01□□□□□ -1.61
HDAC9-220ENST00000461409 IFI27L1Q96BM0 104 aa5.01□□□□□ -1.61
HDAC9-220ENST00000461409 CHCHD1Q96BP2 118 aaKnown RBP5.01□□□□□ -1.61
HDAC9-220ENST00000461409 SPRR4Q96PI1 79 aa5.01□□□□□ -1.61
HDAC9-220ENST00000461409 PRYO14603 147 aa5□□□□□ -1.61
HDAC9-220ENST00000461409 APOC3P02656 99 aa5□□□□□ -1.61
HDAC9-220ENST00000461409 HERV-K104P63124 156 aa5□□□□□ -1.61
HDAC9-220ENST00000461409 BOD1L2Q8IYS8 172 aa5□□□□□ -1.61
HDAC9-220ENST00000461409 C3orf22Q8N5N4 141 aa5□□□□□ -1.61
HDAC9-220ENST00000461409 A0A0U1RRA0 63 aa4.99□□□□□ -1.61
HDAC9-220ENST00000461409 SMIM13P0DJ93 91 aa4.99□□□□□ -1.61
HDAC9-220ENST00000461409 S100A12P80511 92 aa4.99□□□□□ -1.61
HDAC9-220ENST00000461409 MEIG1Q5JSS6 88 aa4.99□□□□□ -1.61
HDAC9-220ENST00000461409 LINC00337Q8N6G1 96 aa4.99□□□□□ -1.61
HDAC9-220ENST00000461409 MAP1LC3CQ9BXW4 147 aa4.99□□□□□ -1.61
HDAC9-220ENST00000461409 MYMXA0A1B0GTQ4 84 aa4.98□□□□□ -1.61
HDAC9-220ENST00000461409 ETDCA0A1B0GVM5 59 aa4.98□□□□□ -1.61
HDAC9-220ENST00000461409 FP248Q71RG6 208 aaPredicted RBP4.98□□□□□ -1.61
HDAC9-220ENST00000461409 MIR7-3HGQ8N6C7 128 aa4.98□□□□□ -1.61
HDAC9-220ENST00000461409 PPDPFQ9H3Y8 114 aa4.98□□□□□ -1.61
HDAC9-220ENST00000461409 KCNQ1DNQ9H478 68 aa4.98□□□□□ -1.61
HDAC9-220ENST00000461409 NCR3O14931 201 aa4.97□□□□□ -1.61
HDAC9-220ENST00000461409 HSBP1O75506 76 aa4.97□□□□□ -1.61
HDAC9-220ENST00000461409 SPRR1AP35321 89 aa4.97□□□□□ -1.61
HDAC9-220ENST00000461409 NDUFA12Q9UI09 145 aa4.97□□□□□ -1.61
HDAC9-220ENST00000461409 Q8NBF4 154 aa4.96□□□□□ -1.62
HDAC9-220ENST00000461409 TRBV10-3A0A0K0K1G6 114 aa4.95□□□□□ -1.62
HDAC9-220ENST00000461409 KRTAP4-16G5E9R7 235 aaPredicted RBP4.95□□□□□ -1.62
HDAC9-220ENST00000461409 SPINK1P00995 79 aa4.95□□□□□ -1.62
HDAC9-220ENST00000461409 PLNP26678 52 aa4.95□□□□□ -1.62
HDAC9-220ENST00000461409 SMCR5Q8TEV8 140 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms