RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 IGHV1-58A0A0C4DH39 117 aa5.08□□□□□ -1.6
ECHDC1-212ENST00000461239 E9PLD3 99 aa5.08□□□□□ -1.6
ECHDC1-212ENST00000461239 COX7A2LO14548 114 aa5.08□□□□□ -1.6
ECHDC1-212ENST00000461239 ABCA13Q86UQ4 5058 aa5.08□□□□□ -1.6
ECHDC1-212ENST00000461239 IGLV4-69A0A075B6H9 119 aa5.07□□□□□ -1.6
ECHDC1-212ENST00000461239 IGHV3-64A0A075B6Q5 118 aa5.07□□□□□ -1.6
ECHDC1-212ENST00000461239 A0A0J9YXV3 536 aa5.07□□□□□ -1.6
ECHDC1-212ENST00000461239 HBDP02042 147 aa5.07□□□□□ -1.6
ECHDC1-212ENST00000461239 G0S2P27469 103 aa5.07□□□□□ -1.6
ECHDC1-212ENST00000461239 CXCL6P80162 114 aa5.07□□□□□ -1.6
ECHDC1-212ENST00000461239 KIAA0087Q14695 138 aa5.07□□□□□ -1.6
ECHDC1-212ENST00000461239 VAMP8Q9BV40 100 aa5.07□□□□□ -1.6
ECHDC1-212ENST00000461239 PRO1933Q9H354 126 aa5.07□□□□□ -1.6
ECHDC1-212ENST00000461239 CST9LQ9H4G1 147 aa5.07□□□□□ -1.6
ECHDC1-212ENST00000461239 SERF1AO75920 110 aa5.06□□□□□ -1.6
ECHDC1-212ENST00000461239 Q6ZN92 141 aa5.06□□□□□ -1.6
ECHDC1-212ENST00000461239 FAM19A2Q8N3H0 131 aa5.06□□□□□ -1.6
ECHDC1-212ENST00000461239 CHCHD1Q96BP2 118 aaKnown RBP5.06□□□□□ -1.6
ECHDC1-212ENST00000461239 SRRM2Q9UQ35 2752 aaKnown RBP5.06□□□□□ -1.6
ECHDC1-212ENST00000461239 LINC01549A6NIU2 74 aa5.05□□□□□ -1.6
ECHDC1-212ENST00000461239 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.05□□□□□ -1.6
ECHDC1-212ENST00000461239 CIRBPQ14011 172 aaKnown RBP5.05□□□□□ -1.6
ECHDC1-212ENST00000461239 PMVKQ15126 192 aa5.05□□□□□ -1.6
ECHDC1-212ENST00000461239 Q6ZRU5 148 aa5.05□□□□□ -1.6
ECHDC1-212ENST00000461239 UQCR10Q9UDW1 63 aa5.05□□□□□ -1.6
ECHDC1-212ENST00000461239 CDKN2A-AS1Q9UH64 79 aa5.05□□□□□ -1.6
ECHDC1-212ENST00000461239 UBR4Q5T4S7 5183 aa5.05□□□□□ -1.6
ECHDC1-212ENST00000461239 TINCRA0A1B0GVN0 87 aa5.04□□□□□ -1.6
ECHDC1-212ENST00000461239 HSBP1O75506 76 aa5.04□□□□□ -1.6
ECHDC1-212ENST00000461239 SMR3BP02814 79 aaPredicted RBP5.04□□□□□ -1.6
ECHDC1-212ENST00000461239 CHTF8P0CG12 524 aa5.04□□□□□ -1.6
ECHDC1-212ENST00000461239 SPAG11BQ08648 103 aa5.04□□□□□ -1.6
ECHDC1-212ENST00000461239 SYCNQ0VAF6 134 aa5.04□□□□□ -1.6
ECHDC1-212ENST00000461239 Q1RN00 199 aa5.04□□□□□ -1.6
ECHDC1-212ENST00000461239 SCXQ7RTU7 201 aa5.04□□□□□ -1.6
ECHDC1-212ENST00000461239 CIRBP-AS1Q8TBR5 109 aa5.04□□□□□ -1.6
ECHDC1-212ENST00000461239 ORAOV1Q8WV07 137 aa5.04□□□□□ -1.6
ECHDC1-212ENST00000461239 CHAC1Q9BUX1 264 aa5.04□□□□□ -1.6
ECHDC1-212ENST00000461239 A0A1B0GV90 55 aa5.03□□□□□ -1.6
ECHDC1-212ENST00000461239 APOMO95445 188 aa5.03□□□□□ -1.6
ECHDC1-212ENST00000461239 IGLC3P0DOY3 106 aa5.03□□□□□ -1.6
ECHDC1-212ENST00000461239 HERVK_113P63121 156 aa5.03□□□□□ -1.6
ECHDC1-212ENST00000461239 COL5A1-AS1Q5SY13 56 aa5.03□□□□□ -1.6
ECHDC1-212ENST00000461239 UNQ6190/PRO20217Q6UXQ8 127 aa5.03□□□□□ -1.6
ECHDC1-212ENST00000461239 CARD19Q96LW7 228 aa5.03□□□□□ -1.6
ECHDC1-212ENST00000461239 SNHG12Q9BXW3 62 aa5.03□□□□□ -1.6
ECHDC1-212ENST00000461239 A0A096LNI7 61 aa5.02□□□□□ -1.61
ECHDC1-212ENST00000461239 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.02□□□□□ -1.61
ECHDC1-212ENST00000461239 ATP5LO75964 103 aa5.02□□□□□ -1.61
ECHDC1-212ENST00000461239 C2orf82Q6UX34 121 aa5.02□□□□□ -1.61
ECHDC1-212ENST00000461239 SPACA4Q8TDM5 124 aa5.02□□□□□ -1.61
ECHDC1-212ENST00000461239 IFI27L1Q96BM0 104 aa5.02□□□□□ -1.61
ECHDC1-212ENST00000461239 CAMK2N2Q96S95 79 aa5.02□□□□□ -1.61
ECHDC1-212ENST00000461239 C6orf48Q9UBA6 75 aa5.02□□□□□ -1.61
ECHDC1-212ENST00000461239 C11orf86A6NJI1 115 aa5.01□□□□□ -1.61
ECHDC1-212ENST00000461239 ZNF22P17026 224 aaPredicted RBP5.01□□□□□ -1.61
ECHDC1-212ENST00000461239 KRTAP10-4P60372 401 aaPredicted RBP5.01□□□□□ -1.61
ECHDC1-212ENST00000461239 KRTDAPP60985 99 aa5.01□□□□□ -1.61
ECHDC1-212ENST00000461239 SEC11AP67812 179 aa5.01□□□□□ -1.61
ECHDC1-212ENST00000461239 TYMSOSQ8TAI1 123 aa5.01□□□□□ -1.61
ECHDC1-212ENST00000461239 PMCHL2Q9BQD1 86 aa5.01□□□□□ -1.61
ECHDC1-212ENST00000461239 GEMIN7Q9H840 131 aaKnown RBP5.01□□□□□ -1.61
ECHDC1-212ENST00000461239 MRPL35Q9NZE8 188 aaKnown RBP5.01□□□□□ -1.61
ECHDC1-212ENST00000461239 HSPB8Q9UJY1 196 aa5.01□□□□□ -1.61
ECHDC1-212ENST00000461239 TRAV12-1A0A0B4J245 112 aa5□□□□□ -1.61
ECHDC1-212ENST00000461239 HSBP1L1C9JCN9 74 aa5□□□□□ -1.61
ECHDC1-212ENST00000461239 SPINK8P0C7L1 97 aa5□□□□□ -1.61
ECHDC1-212ENST00000461239 C3orf79P0CE67 100 aa5□□□□□ -1.61
ECHDC1-212ENST00000461239 SPATA45Q537H7 98 aa5□□□□□ -1.61
ECHDC1-212ENST00000461239 C9orf116Q5BN46 136 aaPredicted RBP5□□□□□ -1.61
ECHDC1-212ENST00000461239 Q8IZM0 81 aa5□□□□□ -1.61
ECHDC1-212ENST00000461239 MYCBP2O75592 4640 aa5□□□□□ -1.61
ECHDC1-212ENST00000461239 IGKV2-24A0A0C4DH68 120 aa4.99□□□□□ -1.61
ECHDC1-212ENST00000461239 NDUFA1O15239 70 aa4.99□□□□□ -1.61
ECHDC1-212ENST00000461239 DLEU1O43261 78 aa4.99□□□□□ -1.61
ECHDC1-212ENST00000461239 LEPROTL1O95214 131 aa4.99□□□□□ -1.61
ECHDC1-212ENST00000461239 HNRNPA3P51991 378 aaKnown RBP4.99□□□□□ -1.61
ECHDC1-212ENST00000461239 MAP1LC3CQ9BXW4 147 aa4.99□□□□□ -1.61
ECHDC1-212ENST00000461239 PLAC8Q9NZF1 115 aa4.99□□□□□ -1.61
ECHDC1-212ENST00000461239 TOMM7Q9P0U1 55 aa4.99□□□□□ -1.61
ECHDC1-212ENST00000461239 CHTOPQ9Y3Y2 248 aaKnown RBP4.99□□□□□ -1.61
ECHDC1-212ENST00000461239 LOC107984640A0A0U1RRK4 108 aa4.98□□□□□ -1.61
ECHDC1-212ENST00000461239 A0A1B0GWB2 263 aa4.98□□□□□ -1.61
ECHDC1-212ENST00000461239 A0A1W2PNN7 141 aa4.98□□□□□ -1.61
ECHDC1-212ENST00000461239 TLX1NBP0CAT3 122 aa4.98□□□□□ -1.61
ECHDC1-212ENST00000461239 SEC61GP60059 68 aa4.98□□□□□ -1.61
ECHDC1-212ENST00000461239 PRR4Q16378 134 aa4.98□□□□□ -1.61
ECHDC1-212ENST00000461239 Q5VSD8 79 aa4.98□□□□□ -1.61
ECHDC1-212ENST00000461239 PKHD1L1Q86WI1 4243 aa4.98□□□□□ -1.61
ECHDC1-212ENST00000461239 TMEM223A0PJW6 202 aa4.97□□□□□ -1.61
ECHDC1-212ENST00000461239 F8VRH5 84 aa4.97□□□□□ -1.61
ECHDC1-212ENST00000461239 SYS1-DBNDD2H3BUS1 97 aa4.97□□□□□ -1.61
ECHDC1-212ENST00000461239 C6orf226Q5I0X4 101 aa4.97□□□□□ -1.61
ECHDC1-212ENST00000461239 LCE1FQ5T754 118 aa4.97□□□□□ -1.61
ECHDC1-212ENST00000461239 COX7B2Q8TF08 81 aa4.97□□□□□ -1.61
ECHDC1-212ENST00000461239 TRBV30A0A0K0K1B3 111 aa4.96□□□□□ -1.62
ECHDC1-212ENST00000461239 H0Y8G0 127 aa4.96□□□□□ -1.62
ECHDC1-212ENST00000461239 RPL13AP40429 203 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-212ENST00000461239 RPL18AQ02543 176 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-212ENST00000461239 TMEM170BQ5T4T1 132 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms