RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 KMT2BQ9UMN6 2715 aaPredicted RBP1.56□□□□□ -2.16
VPS8-215ENST00000460158 TRBV30A0A0K0K1B3 111 aa1.56□□□□□ -2.16
VPS8-215ENST00000460158 J3QRE1 110 aa1.56□□□□□ -2.16
VPS8-215ENST00000460158 HMGA1P17096 107 aaKnown RBP1.56□□□□□ -2.16
VPS8-215ENST00000460158 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.56□□□□□ -2.16
VPS8-215ENST00000460158 LINC00472Q9H8W2 130 aa1.56□□□□□ -2.16
VPS8-215ENST00000460158 KIAA0586Q9BVV6 1533 aa1.56□□□□□ -2.16
VPS8-215ENST00000460158 ERCC6L2Q5T890 1561 aa1.55□□□□□ -2.16
VPS8-215ENST00000460158 A0A1B0GU69 56 aa1.55□□□□□ -2.16
VPS8-215ENST00000460158 FCER1GP30273 86 aa1.55□□□□□ -2.16
VPS8-215ENST00000460158 SMIM11BQ8TCY0 68 aa1.55□□□□□ -2.16
VPS8-215ENST00000460158 FAM208AQ9UK61 1670 aaKnown RBP1.55□□□□□ -2.16
VPS8-215ENST00000460158 LRRC37AA6NMS7 1700 aa1.54□□□□□ -2.16
VPS8-215ENST00000460158 CDC42BPAQ5VT25 1732 aa1.54□□□□□ -2.16
VPS8-215ENST00000460158 ASCC3Q8N3C0 2202 aaKnown RBP1.54□□□□□ -2.16
VPS8-215ENST00000460158 NCR3O14931 201 aa1.54□□□□□ -2.16
VPS8-215ENST00000460158 HAMPP81172 84 aa1.54□□□□□ -2.16
VPS8-215ENST00000460158 C10orf99Q6UWK7 81 aa1.54□□□□□ -2.16
VPS8-215ENST00000460158 KRTAP13-1Q8IUC0 172 aa1.54□□□□□ -2.16
VPS8-215ENST00000460158 TOMM5Q8N4H5 51 aa1.54□□□□□ -2.16
VPS8-215ENST00000460158 UBL5Q9BZL1 73 aa1.54□□□□□ -2.16
VPS8-215ENST00000460158 TOGARAM1Q9Y4F4 1720 aa1.54□□□□□ -2.16
VPS8-215ENST00000460158 PRH1P02810 166 aa1.53□□□□□ -2.16
VPS8-215ENST00000460158 EFCAB6Q5THR3 1501 aa1.53□□□□□ -2.16
VPS8-215ENST00000460158 Q6ZRX8 168 aa1.53□□□□□ -2.16
VPS8-215ENST00000460158 DDX60Q8IY21 1712 aaKnown RBP1.53□□□□□ -2.16
VPS8-215ENST00000460158 ENHOQ6UWT2 76 aa1.52□□□□□ -2.17
VPS8-215ENST00000460158 UNQ6190/PRO20217Q6UXQ8 127 aa1.52□□□□□ -2.17
VPS8-215ENST00000460158 ZCCHC13Q8WW36 166 aaKnown RBP1.52□□□□□ -2.17
VPS8-215ENST00000460158 PLAC4Q8WY50 150 aa1.52□□□□□ -2.17
VPS8-215ENST00000460158 ZFHX3Q15911 3703 aa1.52□□□□□ -2.17
VPS8-215ENST00000460158 ABCC8Q09428 1581 aa1.51□□□□□ -2.17
VPS8-215ENST00000460158 TNCP24821 2201 aa1.51□□□□□ -2.17
VPS8-215ENST00000460158 GVQW2A0A096LPI5 108 aaPredicted RBP1.51□□□□□ -2.17
VPS8-215ENST00000460158 PIN1P1O15428 100 aa1.51□□□□□ -2.17
VPS8-215ENST00000460158 RPL38P63173 70 aaKnown RBP1.51□□□□□ -2.17
VPS8-215ENST00000460158 SPINK13Q1W4C9 94 aa1.51□□□□□ -2.17
VPS8-215ENST00000460158 NCBP2-AS2Q69YL0 99 aa1.51□□□□□ -2.17
VPS8-215ENST00000460158 LINC00575Q6W349 94 aa1.51□□□□□ -2.17
VPS8-215ENST00000460158 URB1O60287 2271 aaKnown RBP1.51□□□□□ -2.17
VPS8-215ENST00000460158 SSC5DA1L4H1 1573 aa1.51□□□□□ -2.17
VPS8-215ENST00000460158 LCE6AA0A183 80 aa1.5□□□□□ -2.17
VPS8-215ENST00000460158 NDUFA4O00483 81 aa1.5□□□□□ -2.17
VPS8-215ENST00000460158 COX7BP24311 80 aa1.5□□□□□ -2.17
VPS8-215ENST00000460158 NWD1Q149M9 1564 aa1.5□□□□□ -2.17
VPS8-215ENST00000460158 A0A096LNT2 108 aa1.49□□□□□ -2.17
VPS8-215ENST00000460158 G3V318 75 aa1.49□□□□□ -2.17
VPS8-215ENST00000460158 DEFB103AP81534 67 aa1.49□□□□□ -2.17
VPS8-215ENST00000460158 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
VPS8-215ENST00000460158 SSBP3-AS1Q7Z2R9 100 aa1.49□□□□□ -2.17
VPS8-215ENST00000460158 NMES1Q9C002 83 aa1.49□□□□□ -2.17
VPS8-215ENST00000460158 SLIT1O75093 1534 aa1.49□□□□□ -2.17
VPS8-215ENST00000460158 TECTAO75443 2155 aa1.48□□□□□ -2.17
VPS8-215ENST00000460158 LINC00959A0A1B0GUT2 108 aa1.48□□□□□ -2.17
VPS8-215ENST00000460158 SERF2P84101 59 aa1.48□□□□□ -2.17
VPS8-215ENST00000460158 KRTAP6-3Q3LI67 103 aa1.48□□□□□ -2.17
VPS8-215ENST00000460158 CMC2Q9NRP2 79 aa1.48□□□□□ -2.17
VPS8-215ENST00000460158 AGLP35573 1532 aa1.48□□□□□ -2.17
VPS8-215ENST00000460158 KNTC1P50748 2209 aa1.48□□□□□ -2.17
VPS8-215ENST00000460158 AHCTF1Q8WYP5 2266 aa1.47□□□□□ -2.17
VPS8-215ENST00000460158 TRPM2O94759 1503 aa1.47□□□□□ -2.17
VPS8-215ENST00000460158 LY6G6CO95867 125 aa1.47□□□□□ -2.17
VPS8-215ENST00000460158 KRTAP12-3P60328 96 aa1.47□□□□□ -2.17
VPS8-215ENST00000460158 KRTAP13-4Q3LI77 160 aa1.47□□□□□ -2.17
VPS8-215ENST00000460158 UBE2DNLQ8IWF7 75 aa1.46□□□□□ -2.18
VPS8-215ENST00000460158 CACNA1GO43497 2377 aa1.45□□□□□ -2.18
VPS8-215ENST00000460158 BAHCC1Q9P281 2608 aa1.45□□□□□ -2.18
VPS8-215ENST00000460158 K7EMI3 77 aa1.45□□□□□ -2.18
VPS8-215ENST00000460158 RPL37P61927 97 aaKnown RBP1.45□□□□□ -2.18
VPS8-215ENST00000460158 ABRACLQ9P1F3 81 aa1.45□□□□□ -2.18
VPS8-215ENST00000460158 ASXL3Q9C0F0 2248 aa1.45□□□□□ -2.18
VPS8-215ENST00000460158 TNRC6CQ9HCJ0 1690 aaKnown RBP1.45□□□□□ -2.18
VPS8-215ENST00000460158 C4AP0C0L4 1744 aa1.44□□□□□ -2.18
VPS8-215ENST00000460158 C4BP0C0L5 1744 aa1.44□□□□□ -2.18
VPS8-215ENST00000460158 SPTY2D1-AS1A0A0U1RR47 76 aa1.44□□□□□ -2.18
VPS8-215ENST00000460158 M0R1W7 72 aa1.44□□□□□ -2.18
VPS8-215ENST00000460158 PLNP26678 52 aa1.44□□□□□ -2.18
VPS8-215ENST00000460158 FBN1P35555 2871 aaKnown RBP1.43□□□□□ -2.18
VPS8-215ENST00000460158 CPSF4LA6NMK7 179 aaKnown RBP1.43□□□□□ -2.18
VPS8-215ENST00000460158 ARL14EPLP0DKL9 152 aa1.43□□□□□ -2.18
VPS8-215ENST00000460158 DEFB114Q30KQ6 69 aa1.43□□□□□ -2.18
VPS8-215ENST00000460158 TULP4Q9NRJ4 1543 aa1.43□□□□□ -2.18
VPS8-215ENST00000460158 ZDBF2Q9HCK1 2354 aa1.43□□□□□ -2.18
VPS8-215ENST00000460158 CACNA1BQ00975 2339 aa1.42□□□□□ -2.18
VPS8-215ENST00000460158 ETDCA0A1B0GVM5 59 aa1.42□□□□□ -2.18
VPS8-215ENST00000460158 MRPL33O75394 65 aaKnown RBP1.42□□□□□ -2.18
VPS8-215ENST00000460158 FXYD6P3P58550 94 aa1.42□□□□□ -2.18
VPS8-215ENST00000460158 KRTAP12-4P60329 112 aa1.42□□□□□ -2.18
VPS8-215ENST00000460158 DEPDC5O75140 1603 aa1.41□□□□□ -2.18
VPS8-215ENST00000460158 NAV3Q8IVL0 2385 aa1.41□□□□□ -2.18
VPS8-215ENST00000460158 KCNQ1DNQ9H478 68 aa1.41□□□□□ -2.18
VPS8-215ENST00000460158 IQGAP1P46940 1657 aa1.41□□□□□ -2.18
VPS8-215ENST00000460158 FLG2Q5D862 2391 aaPredicted RBP1.4□□□□□ -2.19
VPS8-215ENST00000460158 SMIM27A0A1W2PRY6 76 aa1.4□□□□□ -2.19
VPS8-215ENST00000460158 I3L3M4 83 aa1.4□□□□□ -2.19
VPS8-215ENST00000460158 ANGP03950 147 aaKnown RBP1.4□□□□□ -2.19
VPS8-215ENST00000460158 PCOTHQ58A44 107 aa1.4□□□□□ -2.19
VPS8-215ENST00000460158 DOPEY2Q9Y3R5 2298 aa1.4□□□□□ -2.19
VPS8-215ENST00000460158 GOLGA4Q13439 2230 aaKnown RBP1.39□□□□□ -2.19
VPS8-215ENST00000460158 PRB1P04280 392 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms