RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 LINC00575Q6W349 94 aa7.02□□□□□ -1.29
UFD1-205ENST00000459854 LINC01006Q8NI28 216 aa7.02□□□□□ -1.29
UFD1-205ENST00000459854 C10orf25Q5T742 122 aa7.02□□□□□ -1.29
UFD1-205ENST00000459854 GCN1Q92616 2671 aaKnown RBP7.02□□□□□ -1.29
UFD1-205ENST00000459854 JMJD1CQ15652 2540 aa7.01□□□□□ -1.29
UFD1-205ENST00000459854 ABCA2Q9BZC7 2435 aa7.01□□□□□ -1.29
UFD1-205ENST00000459854 LRCOL1A6NCL2 159 aa7.01□□□□□ -1.29
UFD1-205ENST00000459854 C16orf95Q9H693 158 aa7.01□□□□□ -1.29
UFD1-205ENST00000459854 PROK1P58294 105 aa7.01□□□□□ -1.29
UFD1-205ENST00000459854 LINC00474Q9P2X8 69 aa7.01□□□□□ -1.29
UFD1-205ENST00000459854 KRTAP1-1Q07627 177 aa7□□□□□ -1.29
UFD1-205ENST00000459854 MTORP42345 2549 aa6.99□□□□□ -1.29
UFD1-205ENST00000459854 CYP4F30PQ9H0H9 118 aa6.99□□□□□ -1.29
UFD1-205ENST00000459854 ZNF580Q9UK33 172 aa6.99□□□□□ -1.29
UFD1-205ENST00000459854 A0A0J9YWU9 116 aa6.99□□□□□ -1.29
UFD1-205ENST00000459854 CD164Q04900 197 aa6.99□□□□□ -1.29
UFD1-205ENST00000459854 ITPR3Q14573 2671 aa6.99□□□□□ -1.29
UFD1-205ENST00000459854 TP53AIP1Q9HCN2 124 aa6.99□□□□□ -1.29
UFD1-205ENST00000459854 LINC01548A6NM66 108 aa6.98□□□□□ -1.29
UFD1-205ENST00000459854 C11orf45Q8TAV5 145 aa6.98□□□□□ -1.29
UFD1-205ENST00000459854 IGKV2-24A0A0C4DH68 120 aa6.98□□□□□ -1.29
UFD1-205ENST00000459854 CYSRT1A8MQ03 144 aa6.98□□□□□ -1.29
UFD1-205ENST00000459854 IGLV1-40P01703 118 aa6.98□□□□□ -1.29
UFD1-205ENST00000459854 LOC110117498A0A087WWA1 95 aa6.97□□□□□ -1.29
UFD1-205ENST00000459854 IGLV5-39A0A0G2JS06 123 aa6.97□□□□□ -1.29
UFD1-205ENST00000459854 FLNAP21333 2647 aaKnown RBP6.97□□□□□ -1.29
UFD1-205ENST00000459854 IGKV2-28A0A075B6P5 120 aa6.97□□□□□ -1.29
UFD1-205ENST00000459854 IGKV2D-28P01615 120 aa6.97□□□□□ -1.29
UFD1-205ENST00000459854 BEAN1Q3B7T3 259 aa6.97□□□□□ -1.29
UFD1-205ENST00000459854 A0A1B0GUV1 79 aa6.96□□□□□ -1.3
UFD1-205ENST00000459854 C8orf87E5RJ46 101 aa6.96□□□□□ -1.3
UFD1-205ENST00000459854 SPAG11AQ6PDA7 123 aa6.95□□□□□ -1.3
UFD1-205ENST00000459854 Q8N2B8 174 aa6.95□□□□□ -1.3
UFD1-205ENST00000459854 C2orf48Q96LS8 159 aa6.95□□□□□ -1.3
UFD1-205ENST00000459854 WIPF1O43516 503 aa6.95□□□□□ -1.3
UFD1-205ENST00000459854 COX6A2Q02221 97 aa6.94□□□□□ -1.3
UFD1-205ENST00000459854 C1orf64Q8NEQ6 169 aa6.94□□□□□ -1.3
UFD1-205ENST00000459854 NBEAQ8NFP9 2946 aa6.94□□□□□ -1.3
UFD1-205ENST00000459854 A0A096LNI7 61 aa6.93□□□□□ -1.3
UFD1-205ENST00000459854 COL12A1Q99715 3063 aa6.93□□□□□ -1.3
UFD1-205ENST00000459854 RPL37AP8A6NKH3 93 aa6.93□□□□□ -1.3
UFD1-205ENST00000459854 NANOS2P60321 138 aaKnown RBP6.93□□□□□ -1.3
UFD1-205ENST00000459854 WDFY3Q8IZQ1 3526 aa6.93□□□□□ -1.3
UFD1-205ENST00000459854 DSCAML1Q8TD84 2053 aa6.93□□□□□ -1.3
UFD1-205ENST00000459854 DEFB131BA0A096LNP1 70 aa6.92□□□□□ -1.3
UFD1-205ENST00000459854 REG3GQ6UW15 175 aa6.92□□□□□ -1.3
UFD1-205ENST00000459854 LINC00337Q8N6G1 96 aa6.92□□□□□ -1.3
UFD1-205ENST00000459854 C7orf33Q8WU49 177 aa6.92□□□□□ -1.3
UFD1-205ENST00000459854 IGLV5-45A0A087WSX0 123 aa6.92□□□□□ -1.3
UFD1-205ENST00000459854 DEFB4AO15263 64 aa6.92□□□□□ -1.3
UFD1-205ENST00000459854 CFAP47Q6ZTR5 3102 aa6.92□□□□□ -1.3
UFD1-205ENST00000459854 KPRPQ5T749 579 aaPredicted RBP6.92□□□□□ -1.3
UFD1-205ENST00000459854 KRTAP24-1Q3LI83 254 aa6.91□□□□□ -1.3
UFD1-205ENST00000459854 ASPMQ8IZT6 3477 aa6.91□□□□□ -1.3
UFD1-205ENST00000459854 TRAV10A0A0B4J240 114 aa6.91□□□□□ -1.3
UFD1-205ENST00000459854 PRM2P04554 102 aa6.91□□□□□ -1.3
UFD1-205ENST00000459854 UNQ6190/PRO20217Q6UXQ8 127 aa6.91□□□□□ -1.3
UFD1-205ENST00000459854 LINC00482Q8N8I6 264 aa6.91□□□□□ -1.3
UFD1-205ENST00000459854 LAMA5O15230 3695 aa6.91□□□□□ -1.3
UFD1-205ENST00000459854 ACYP2P14621 99 aa6.91□□□□□ -1.3
UFD1-205ENST00000459854 RETNLBQ9BQ08 111 aa6.91□□□□□ -1.3
UFD1-205ENST00000459854 C10orf99Q6UWK7 81 aa6.9□□□□□ -1.3
UFD1-205ENST00000459854 KIF25-AS1Q9Y6Z4 181 aa6.9□□□□□ -1.3
UFD1-205ENST00000459854 A0A1B0GU69 56 aa6.9□□□□□ -1.3
UFD1-205ENST00000459854 SPATA3Q8NHX4 192 aa6.9□□□□□ -1.3
UFD1-205ENST00000459854 NHLRC4P0CG21 123 aaPredicted RBP6.9□□□□□ -1.31
UFD1-205ENST00000459854 C11orf72Q8NBR9 251 aa6.9□□□□□ -1.31
UFD1-205ENST00000459854 CR1P17927 2039 aa6.89□□□□□ -1.31
UFD1-205ENST00000459854 C6orf223Q8N319 242 aa6.89□□□□□ -1.31
UFD1-205ENST00000459854 TNCP24821 2201 aa6.89□□□□□ -1.31
UFD1-205ENST00000459854 C2CD3Q4AC94 2353 aa6.89□□□□□ -1.31
UFD1-205ENST00000459854 SMIM29Q86T20 159 aa6.89□□□□□ -1.31
UFD1-205ENST00000459854 Q6ZQT0 140 aa6.88□□□□□ -1.31
UFD1-205ENST00000459854 PCOTHQ58A44 107 aa6.88□□□□□ -1.31
UFD1-205ENST00000459854 FAM19A4Q96LR4 140 aa6.88□□□□□ -1.31
UFD1-205ENST00000459854 LOC100131303A0A0U1RQF7 123 aa6.88□□□□□ -1.31
UFD1-205ENST00000459854 Q6ZTC4 211 aa6.88□□□□□ -1.31
UFD1-205ENST00000459854 KLKP1Q107X0 134 aa6.88□□□□□ -1.31
UFD1-205ENST00000459854 ELOF1P60002 83 aaKnown RBP6.87□□□□□ -1.31
UFD1-205ENST00000459854 SPINK6Q6UWN8 80 aa6.87□□□□□ -1.31
UFD1-205ENST00000459854 ZFHX4Q86UP3 3567 aa6.86□□□□□ -1.31
UFD1-205ENST00000459854 A0A087WSZ3 146 aa6.86□□□□□ -1.31
UFD1-205ENST00000459854 Q9BRP9 147 aa6.86□□□□□ -1.31
UFD1-205ENST00000459854 ATP11AUNQ6ZP68 121 aa6.86□□□□□ -1.31
UFD1-205ENST00000459854 ADGRG4Q8IZF6 3080 aa6.86□□□□□ -1.31
UFD1-205ENST00000459854 FHL2Q14192 279 aa6.85□□□□□ -1.31
UFD1-205ENST00000459854 ITPR2Q14571 2701 aa6.85□□□□□ -1.31
UFD1-205ENST00000459854 FN1P02751 2386 aaKnown RBP6.85□□□□□ -1.31
UFD1-205ENST00000459854 IGHV4-30-4P0DP06 118 aa6.85□□□□□ -1.31
UFD1-205ENST00000459854 APCP25054 2843 aa6.85□□□□□ -1.31
UFD1-205ENST00000459854 IGLV4-60A0A075B6I1 120 aa6.85□□□□□ -1.31
UFD1-205ENST00000459854 PLXNB1O43157 2135 aa6.84□□□□□ -1.31
UFD1-205ENST00000459854 IGHV6-1A0A0B4J1U7 121 aa6.84□□□□□ -1.31
UFD1-205ENST00000459854 KTN1-AS1Q86SY8 53 aa6.83□□□□□ -1.32
UFD1-205ENST00000459854 IGLV9-49A0A0B4J1Y8 123 aa6.83□□□□□ -1.32
UFD1-205ENST00000459854 PRR3P79522 188 aaKnown RBP6.83□□□□□ -1.32
UFD1-205ENST00000459854 C18orf65Q6ZTR6 163 aa6.83□□□□□ -1.32
UFD1-205ENST00000459854 TENM4Q6N022 2769 aa6.83□□□□□ -1.32
UFD1-205ENST00000459854 SETD2Q9BYW2 2564 aaPredicted RBP6.83□□□□□ -1.32
UFD1-205ENST00000459854 WNK1Q9H4A3 2382 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms