RNA–Protein interactions for RNA: ENST00000457356.8

MSC-AS1-201, MSC antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene MSC-AS1, Length 4,220 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-201ENST00000457356 LINC00208Q96KT6 92 aa6.96□□□□□ -1.29
MSC-AS1-201ENST00000457356 NBEAL1Q6ZS30 2694 aa6.96□□□□□ -1.29
MSC-AS1-201ENST00000457356 TACC2O95359 2948 aa6.96□□□□□ -1.29
MSC-AS1-201ENST00000457356 Q6ZSN1 163 aa6.96□□□□□ -1.29
MSC-AS1-201ENST00000457356 DEFB131BA0A096LNP1 70 aa6.96□□□□□ -1.3
MSC-AS1-201ENST00000457356 Q8N2B8 174 aa6.96□□□□□ -1.3
MSC-AS1-201ENST00000457356 SPINK6Q6UWN8 80 aa6.96□□□□□ -1.3
MSC-AS1-201ENST00000457356 DMXL1Q9Y485 3027 aa6.95□□□□□ -1.3
MSC-AS1-201ENST00000457356 LYRM9A8MSI8 78 aa6.95□□□□□ -1.3
MSC-AS1-201ENST00000457356 LINC00337Q8N6G1 96 aa6.95□□□□□ -1.3
MSC-AS1-201ENST00000457356 ITPR2Q14571 2701 aa6.95□□□□□ -1.3
MSC-AS1-201ENST00000457356 TRBV10-3A0A0K0K1G6 114 aa6.95□□□□□ -1.3
MSC-AS1-201ENST00000457356 SEC61GP60059 68 aa6.95□□□□□ -1.3
MSC-AS1-201ENST00000457356 Q8IZM0 81 aa6.95□□□□□ -1.3
MSC-AS1-201ENST00000457356 M0R378 163 aa6.94□□□□□ -1.3
MSC-AS1-201ENST00000457356 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.94□□□□□ -1.3
MSC-AS1-201ENST00000457356 TRBV7-7A0A0K0K1E9 115 aa6.94□□□□□ -1.3
MSC-AS1-201ENST00000457356 CASC2Q6XLA1 102 aa6.94□□□□□ -1.3
MSC-AS1-201ENST00000457356 RETNQ9HD89 108 aa6.94□□□□□ -1.3
MSC-AS1-201ENST00000457356 IGLV1-51P01701 117 aa6.93□□□□□ -1.3
MSC-AS1-201ENST00000457356 ODF3L2Q3SX64 289 aa6.93□□□□□ -1.3
MSC-AS1-201ENST00000457356 Q8N9L7 120 aa6.93□□□□□ -1.3
MSC-AS1-201ENST00000457356 B9D2Q9BPU9 175 aa6.93□□□□□ -1.3
MSC-AS1-201ENST00000457356 LY6G6CO95867 125 aa6.93□□□□□ -1.3
MSC-AS1-201ENST00000457356 MRGPRG-AS1Q2M3A8 158 aa6.93□□□□□ -1.3
MSC-AS1-201ENST00000457356 KRTAP1-3Q8IUG1 177 aa6.92□□□□□ -1.3
MSC-AS1-201ENST00000457356 A0A096LNT2 108 aa6.92□□□□□ -1.3
MSC-AS1-201ENST00000457356 C4orf48Q5BLP8 95 aa6.92□□□□□ -1.3
MSC-AS1-201ENST00000457356 LINC00575Q6W349 94 aa6.92□□□□□ -1.3
MSC-AS1-201ENST00000457356 TMEM254Q8TBM7 123 aa6.92□□□□□ -1.3
MSC-AS1-201ENST00000457356 KIF25-AS1Q9Y6Z4 181 aa6.92□□□□□ -1.3
MSC-AS1-201ENST00000457356 COL12A1Q99715 3063 aa6.92□□□□□ -1.3
MSC-AS1-201ENST00000457356 Q6ZVQ6 151 aa6.92□□□□□ -1.3
MSC-AS1-201ENST00000457356 FSHBP01225 129 aa6.91□□□□□ -1.3
MSC-AS1-201ENST00000457356 UBR5O95071 2799 aaPredicted RBP6.91□□□□□ -1.3
MSC-AS1-201ENST00000457356 ATMQ13315 3056 aa6.91□□□□□ -1.3
MSC-AS1-201ENST00000457356 SBSPONQ8IVN8 264 aa6.91□□□□□ -1.3
MSC-AS1-201ENST00000457356 SPATA3Q8NHX4 192 aa6.91□□□□□ -1.3
MSC-AS1-201ENST00000457356 PRYO14603 147 aa6.9□□□□□ -1.3
MSC-AS1-201ENST00000457356 LINC01547P58512 204 aaPredicted RBP6.9□□□□□ -1.3
MSC-AS1-201ENST00000457356 Q9UF83 564 aa6.9□□□□□ -1.3
MSC-AS1-201ENST00000457356 TRBV7-6A0A0J9YX20 115 aa6.9□□□□□ -1.31
MSC-AS1-201ENST00000457356 COX17Q14061 63 aa6.9□□□□□ -1.31
MSC-AS1-201ENST00000457356 DEFB116Q30KQ4 102 aa6.9□□□□□ -1.31
MSC-AS1-201ENST00000457356 PRR15LQ9BU68 103 aa6.9□□□□□ -1.31
MSC-AS1-201ENST00000457356 KPRPQ5T749 579 aaPredicted RBP6.9□□□□□ -1.31
MSC-AS1-201ENST00000457356 TRAV10A0A0B4J240 114 aa6.89□□□□□ -1.31
MSC-AS1-201ENST00000457356 C1orf137Q5JT78 98 aa6.89□□□□□ -1.31
MSC-AS1-201ENST00000457356 BOD1L1Q8NFC6 3051 aa6.89□□□□□ -1.31
MSC-AS1-201ENST00000457356 COL27A1Q8IZC6 1860 aaPredicted RBP6.89□□□□□ -1.31
MSC-AS1-201ENST00000457356 BEAN1Q3B7T3 259 aa6.89□□□□□ -1.31
MSC-AS1-201ENST00000457356 C6orf223Q8N319 242 aa6.89□□□□□ -1.31
MSC-AS1-201ENST00000457356 MDFIQ99750 246 aa6.89□□□□□ -1.31
MSC-AS1-201ENST00000457356 NOTCH1P46531 2555 aa6.88□□□□□ -1.31
MSC-AS1-201ENST00000457356 LELP1Q5T871 98 aa6.88□□□□□ -1.31
MSC-AS1-201ENST00000457356 FAM19A4Q96LR4 140 aa6.88□□□□□ -1.31
MSC-AS1-201ENST00000457356 DHRS4-AS1Q9P1J3 65 aa6.88□□□□□ -1.31
MSC-AS1-201ENST00000457356 CRYGAP11844 174 aa6.88□□□□□ -1.31
MSC-AS1-201ENST00000457356 LINC00315P59091 139 aa6.88□□□□□ -1.31
MSC-AS1-201ENST00000457356 SMCR5Q8TEV8 140 aa6.87□□□□□ -1.31
MSC-AS1-201ENST00000457356 FAM218AQ96MZ4 157 aa6.87□□□□□ -1.31
MSC-AS1-201ENST00000457356 PRO0628Q9UI54 55 aa6.87□□□□□ -1.31
MSC-AS1-201ENST00000457356 PCOTHQ58A44 107 aa6.86□□□□□ -1.31
MSC-AS1-201ENST00000457356 LINC00336Q6ZUF6 198 aa6.86□□□□□ -1.31
MSC-AS1-201ENST00000457356 MUC7Q8TAX7 377 aa6.86□□□□□ -1.31
MSC-AS1-201ENST00000457356 SPTBN5Q9NRC6 3674 aaKnown RBP6.86□□□□□ -1.31
MSC-AS1-201ENST00000457356 M0R2N4 97 aa6.86□□□□□ -1.31
MSC-AS1-201ENST00000457356 KRTAP1-1Q07627 177 aa6.86□□□□□ -1.31
MSC-AS1-201ENST00000457356 ESRGQ1W209 222 aa6.85□□□□□ -1.31
MSC-AS1-201ENST00000457356 ITPR1Q14643 2758 aa6.84□□□□□ -1.31
MSC-AS1-201ENST00000457356 IGLV9-49A0A0B4J1Y8 123 aa6.84□□□□□ -1.31
MSC-AS1-201ENST00000457356 FHL2Q14192 279 aa6.84□□□□□ -1.31
MSC-AS1-201ENST00000457356 A0A087WSZ3 146 aa6.84□□□□□ -1.32
MSC-AS1-201ENST00000457356 ZZEF1O43149 2961 aa6.83□□□□□ -1.32
MSC-AS1-201ENST00000457356 CYSTM1Q9H1C7 97 aa6.83□□□□□ -1.32
MSC-AS1-201ENST00000457356 NUPR2A6NF83 97 aa6.83□□□□□ -1.32
MSC-AS1-201ENST00000457356 EGFEM1PQ0D2K5 195 aa6.82□□□□□ -1.32
MSC-AS1-201ENST00000457356 IGLV5-39A0A0G2JS06 123 aa6.82□□□□□ -1.32
MSC-AS1-201ENST00000457356 RPS28P62857 69 aaKnown RBP6.82□□□□□ -1.32
MSC-AS1-201ENST00000457356 IGHV3OR16-9A0A0B4J2B5 98 aa6.82□□□□□ -1.32
MSC-AS1-201ENST00000457356 ADGRG4Q8IZF6 3080 aa6.81□□□□□ -1.32
MSC-AS1-201ENST00000457356 LINC01546A6NGU7 62 aa6.81□□□□□ -1.32
MSC-AS1-201ENST00000457356 EIF4EBP3O60516 100 aaPredicted RBP6.81□□□□□ -1.32
MSC-AS1-201ENST00000457356 K7ERS5 55 aa6.8□□□□□ -1.32
MSC-AS1-201ENST00000457356 C14orf177Q52M58 125 aa6.8□□□□□ -1.32
MSC-AS1-201ENST00000457356 ASPMQ8IZT6 3477 aa6.8□□□□□ -1.32
MSC-AS1-201ENST00000457356 HIVEP1P15822 2718 aa6.79□□□□□ -1.32
MSC-AS1-201ENST00000457356 LOC400499M0QZD8 3231 aa6.78□□□□□ -1.32
MSC-AS1-201ENST00000457356 Q6ZTC4 211 aa6.78□□□□□ -1.32
MSC-AS1-201ENST00000457356 C2orf48Q96LS8 159 aa6.78□□□□□ -1.32
MSC-AS1-201ENST00000457356 H0Y9P7 68 aa6.77□□□□□ -1.33
MSC-AS1-201ENST00000457356 TM2D3Q9BRN9 247 aa6.77□□□□□ -1.33
MSC-AS1-201ENST00000457356 A0A1B0GUV1 79 aa6.76□□□□□ -1.33
MSC-AS1-201ENST00000457356 SMIM29Q86T20 159 aa6.76□□□□□ -1.33
MSC-AS1-201ENST00000457356 LINC00474Q9P2X8 69 aa6.76□□□□□ -1.33
MSC-AS1-201ENST00000457356 PLAC8L1A1L4L8 177 aa6.76□□□□□ -1.33
MSC-AS1-201ENST00000457356 IGHV6-1A0A0B4J1U7 121 aa6.75□□□□□ -1.33
MSC-AS1-201ENST00000457356 CXCL6P80162 114 aa6.75□□□□□ -1.33
MSC-AS1-201ENST00000457356 C11orf72Q8NBR9 251 aa6.75□□□□□ -1.33
MSC-AS1-201ENST00000457356 F8WDY8 70 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms