RNA–Protein interactions for RNA: ENST00000454132.5

LMBR1-213, Transcript of limb development membrane protein 1, human

TSL 2

Gene LMBR1, Length 2,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMBR1-213	ENST00000454132		Q6ZVQ6	151 aa		13.35	□□□□□ -0.27
LMBR1-213	ENST00000454132	IGLV1-51	P01701	117 aa		13.34	□□□□□ -0.27
LMBR1-213	ENST00000454132	DEFB113	Q30KQ7	82 aa		13.34	□□□□□ -0.27
LMBR1-213	ENST00000454132	LYPD5	Q6UWN5	251 aa		13.34	□□□□□ -0.27
LMBR1-213	ENST00000454132	CD164L2	Q6UWJ8	174 aa		13.33	□□□□□ -0.27
LMBR1-213	ENST00000454132	NDUFC2	O95298	119 aa		13.33	□□□□□ -0.28
LMBR1-213	ENST00000454132		A0A1B0GUV1	79 aa		13.33	□□□□□ -0.28
LMBR1-213	ENST00000454132	LINC00482	Q8N8I6	264 aa		13.33	□□□□□ -0.28
LMBR1-213	ENST00000454132		H7BZZ5	65 aa		13.32	□□□□□ -0.28
LMBR1-213	ENST00000454132	HTN3	P15516	51 aa		13.32	□□□□□ -0.28
LMBR1-213	ENST00000454132	PRO0255	Q9UI72	69 aa		13.3	□□□□□ -0.28
LMBR1-213	ENST00000454132	ZNF561-AS1	K7EIQ3	104 aa		13.3	□□□□□ -0.28
LMBR1-213	ENST00000454132	SPAG11B	Q08648	103 aa		13.29	□□□□□ -0.28
LMBR1-213	ENST00000454132	CYSRT1	A8MQ03	144 aa		13.29	□□□□□ -0.28
LMBR1-213	ENST00000454132		F8WEM9	126 aa		13.29	□□□□□ -0.28
LMBR1-213	ENST00000454132		Q8N9L7	120 aa		13.29	□□□□□ -0.28
LMBR1-213	ENST00000454132	TM2D3	Q9BRN9	247 aa		13.29	□□□□□ -0.28
LMBR1-213	ENST00000454132	TRBV10-3	A0A0K0K1G6	114 aa		13.28	□□□□□ -0.28
LMBR1-213	ENST00000454132	USP24	Q9UPU5	2620 aa		13.27	□□□□□ -0.28
LMBR1-213	ENST00000454132	TRAV7	A0A075B6U4	112 aa		13.26	□□□□□ -0.29
LMBR1-213	ENST00000454132	COX17	Q14061	63 aa		13.26	□□□□□ -0.29
LMBR1-213	ENST00000454132		X6R8D5	127 aa		13.26	□□□□□ -0.29
LMBR1-213	ENST00000454132	DEFB135	Q30KP9	77 aa		13.25	□□□□□ -0.29
LMBR1-213	ENST00000454132	KLK12	Q9UKR0	248 aa		13.25	□□□□□ -0.29
LMBR1-213	ENST00000454132	UBR5	O95071	2799 aa	Predicted RBP	13.24	□□□□□ -0.29
LMBR1-213	ENST00000454132	CMC4	P56277	68 aa	Predicted RBP	13.24	□□□□□ -0.29
LMBR1-213	ENST00000454132	KRTAP1-3	Q8IUG1	177 aa		13.23	□□□□□ -0.29
LMBR1-213	ENST00000454132	UNC79	Q9P2D8	2635 aa		13.23	□□□□□ -0.29
LMBR1-213	ENST00000454132	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	13.23	□□□□□ -0.29
LMBR1-213	ENST00000454132	MUC7	Q8TAX7	377 aa		13.23	□□□□□ -0.29
LMBR1-213	ENST00000454132	ITPR2	Q14571	2701 aa		13.22	□□□□□ -0.29
LMBR1-213	ENST00000454132	IGHV4-28	A0A0C4DH34	117 aa		13.22	□□□□□ -0.29
LMBR1-213	ENST00000454132	NDUFC2-KCTD14	E9PQ53	114 aa		13.22	□□□□□ -0.29
LMBR1-213	ENST00000454132	LINC00474	Q9P2X8	69 aa		13.22	□□□□□ -0.29
LMBR1-213	ENST00000454132	LOC110117498	A0A087WWA1	95 aa		13.21	□□□□□ -0.29
LMBR1-213	ENST00000454132	LINC00336	Q6ZUF6	198 aa		13.21	□□□□□ -0.29
LMBR1-213	ENST00000454132	IGLV6-57	P01721	117 aa		13.19	□□□□□ -0.3
LMBR1-213	ENST00000454132	HIGD2B	Q4VC39	106 aa		13.19	□□□□□ -0.3
LMBR1-213	ENST00000454132	NOTCH2	Q04721	2471 aa		13.18	□□□□□ -0.3
LMBR1-213	ENST00000454132	CELA1	Q9UNI1	258 aa		13.18	□□□□□ -0.3
LMBR1-213	ENST00000454132	SERP1	Q9Y6X1	66 aa		13.18	□□□□□ -0.3
LMBR1-213	ENST00000454132	PKD1L1	Q8TDX9	2849 aa		13.17	□□□□□ -0.3
LMBR1-213	ENST00000454132	LINC00612	Q8N6U2	182 aa		13.17	□□□□□ -0.3
LMBR1-213	ENST00000454132	DIRC1	Q969H9	104 aa		13.16	□□□□□ -0.3
LMBR1-213	ENST00000454132	C6orf48	Q9UBA6	75 aa		13.16	□□□□□ -0.3
LMBR1-213	ENST00000454132	WIPF1	O43516	503 aa		13.15	□□□□□ -0.3
LMBR1-213	ENST00000454132	DAD1	P61803	113 aa		13.15	□□□□□ -0.3
LMBR1-213	ENST00000454132	KLKP1	Q107X0	134 aa		13.15	□□□□□ -0.3
LMBR1-213	ENST00000454132	FP248	Q71RG6	208 aa	Predicted RBP	13.15	□□□□□ -0.3
LMBR1-213	ENST00000454132	ZNF73	O43830	326 aa	Predicted RBP	13.14	□□□□□ -0.31
LMBR1-213	ENST00000454132	ANK3	Q12955	4377 aa	Known RBP	13.14	□□□□□ -0.31
LMBR1-213	ENST00000454132	TRRAP	Q9Y4A5	3859 aa		13.13	□□□□□ -0.31
LMBR1-213	ENST00000454132	TENM1	Q9UKZ4	2725 aa		13.13	□□□□□ -0.31
LMBR1-213	ENST00000454132	BPY2	O14599	106 aa		13.12	□□□□□ -0.31
LMBR1-213	ENST00000454132	COX7B	P24311	80 aa		13.12	□□□□□ -0.31
LMBR1-213	ENST00000454132	HIVEP1	P15822	2718 aa		13.12	□□□□□ -0.31
LMBR1-213	ENST00000454132	C3orf84	H3BNL1	204 aa		13.11	□□□□□ -0.31
LMBR1-213	ENST00000454132	KRTAP10-3	P60369	221 aa		13.11	□□□□□ -0.31
LMBR1-213	ENST00000454132	NREP	Q16612	68 aa		13.11	□□□□□ -0.31
LMBR1-213	ENST00000454132	DEFB105A	Q8NG35	78 aa		13.1	□□□□□ -0.31
LMBR1-213	ENST00000454132	CXCL6	P80162	114 aa		13.1	□□□□□ -0.31
LMBR1-213	ENST00000454132	TRBV7-6	A0A0J9YX20	115 aa		13.09	□□□□□ -0.31
LMBR1-213	ENST00000454132	MIF	P14174	115 aa		13.09	□□□□□ -0.31
LMBR1-213	ENST00000454132	TRBV7-4	A0A0J9YYF1	115 aa		13.09	□□□□□ -0.31
LMBR1-213	ENST00000454132	MPLKIP	Q8TAP9	179 aa		13.09	□□□□□ -0.31
LMBR1-213	ENST00000454132		A0A0J9YWU9	116 aa		13.08	□□□□□ -0.32
LMBR1-213	ENST00000454132	IGHV4-30-4	P0DP06	118 aa		13.08	□□□□□ -0.32
LMBR1-213	ENST00000454132	C9orf66	Q5T8R8	295 aa		13.08	□□□□□ -0.32
LMBR1-213	ENST00000454132	PKIG	Q9Y2B9	76 aa		13.07	□□□□□ -0.32
LMBR1-213	ENST00000454132	F8	P00451	2351 aa		13.07	□□□□□ -0.32
LMBR1-213	ENST00000454132	FAM229B	Q4G0N7	80 aa		13.06	□□□□□ -0.32
LMBR1-213	ENST00000454132	C1orf43	Q9BWL3	253 aa		13.06	□□□□□ -0.32
LMBR1-213	ENST00000454132	TEP1	Q99973	2627 aa	Known RBP	13.06	□□□□□ -0.32
LMBR1-213	ENST00000454132	EPM2A	B3EWF7	344 aa		13.06	□□□□□ -0.32
LMBR1-213	ENST00000454132	SMR3A	Q99954	134 aa		13.06	□□□□□ -0.32
LMBR1-213	ENST00000454132	TENM4	Q6N022	2769 aa		13.05	□□□□□ -0.32
LMBR1-213	ENST00000454132	PDZD2	O15018	2839 aa		13.05	□□□□□ -0.32
LMBR1-213	ENST00000454132	TMEM254	Q8TBM7	123 aa		13.05	□□□□□ -0.32
LMBR1-213	ENST00000454132	C16orf95	Q9H693	158 aa		13.05	□□□□□ -0.32
LMBR1-213	ENST00000454132	ATR	Q13535	2644 aa		13.04	□□□□□ -0.32
LMBR1-213	ENST00000454132	CAMK2N2	Q96S95	79 aa		13.04	□□□□□ -0.32
LMBR1-213	ENST00000454132	LYRM9	A8MSI8	78 aa		13.03	□□□□□ -0.32
LMBR1-213	ENST00000454132	PDE6G	P18545	87 aa		13.03	□□□□□ -0.32
LMBR1-213	ENST00000454132	ELOF1	P60002	83 aa	Known RBP	13.03	□□□□□ -0.32
LMBR1-213	ENST00000454132	SMIM26	A0A096LP01	95 aa		13.02	□□□□□ -0.33
LMBR1-213	ENST00000454132	FASN	P49327	2511 aa	Known RBP	13.01	□□□□□ -0.33
LMBR1-213	ENST00000454132		A0A0U1RQV1	116 aa		13.01	□□□□□ -0.33
LMBR1-213	ENST00000454132	BCE1	O60756	84 aa		13	□□□□□ -0.33
LMBR1-213	ENST00000454132		Q6ZRU5	148 aa		13	□□□□□ -0.33
LMBR1-213	ENST00000454132	VPREB1	P12018	145 aa		12.99	□□□□□ -0.33
LMBR1-213	ENST00000454132	KRTAP1-1	Q07627	177 aa		12.99	□□□□□ -0.33
LMBR1-213	ENST00000454132	LELP1	Q5T871	98 aa		12.99	□□□□□ -0.33
LMBR1-213	ENST00000454132	BRK1	Q8WUW1	75 aa		12.99	□□□□□ -0.33
LMBR1-213	ENST00000454132	HIGD2A	Q9BW72	106 aa		12.99	□□□□□ -0.33
LMBR1-213	ENST00000454132	WFDC10B	Q8IUB3	73 aa		12.99	□□□□□ -0.33
LMBR1-213	ENST00000454132	LRCOL1	A6NCL2	159 aa		12.98	□□□□□ -0.33
LMBR1-213	ENST00000454132	IGKV4-1	P06312	121 aa		12.98	□□□□□ -0.33
LMBR1-213	ENST00000454132	PRO0628	Q9UI54	55 aa		12.97	□□□□□ -0.33
LMBR1-213	ENST00000454132	PRR34	Q9NV39	138 aa		12.97	□□□□□ -0.33
LMBR1-213	ENST00000454132	FAM30A	Q9NZY2	134 aa		12.96	□□□□□ -0.33

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