RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 Q8NDZ9 215 aa5.87□□□□□ -1.47
LSM5-208ENST00000450169 MAP6D1Q9H9H5 199 aa5.87□□□□□ -1.47
LSM5-208ENST00000450169 TRBV6-8A0A0A6YYG3 113 aa5.86□□□□□ -1.47
LSM5-208ENST00000450169 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.86□□□□□ -1.47
LSM5-208ENST00000450169 NBPF19A0A087WUL8 3843 aa5.86□□□□□ -1.47
LSM5-208ENST00000450169 ZNF462Q96JM2 2506 aa5.86□□□□□ -1.47
LSM5-208ENST00000450169 LRRK2Q5S007 2527 aa5.86□□□□□ -1.47
LSM5-208ENST00000450169 TRGV2A0A075B6R0 118 aa5.85□□□□□ -1.47
LSM5-208ENST00000450169 UBE2E2Q96LR5 201 aa5.85□□□□□ -1.47
LSM5-208ENST00000450169 ABCA2Q9BZC7 2435 aa5.85□□□□□ -1.47
LSM5-208ENST00000450169 PLA2G2AP14555 144 aa5.85□□□□□ -1.47
LSM5-208ENST00000450169 COX7BP24311 80 aa5.85□□□□□ -1.47
LSM5-208ENST00000450169 C2CD3Q4AC94 2353 aa5.84□□□□□ -1.47
LSM5-208ENST00000450169 CREBBPQ92793 2442 aa5.83□□□□□ -1.48
LSM5-208ENST00000450169 C9orf116Q5BN46 136 aaPredicted RBP5.83□□□□□ -1.48
LSM5-208ENST00000450169 NOP10Q9NPE3 64 aaKnown RBP5.83□□□□□ -1.48
LSM5-208ENST00000450169 FAM208BQ5VWN6 2430 aa5.83□□□□□ -1.48
LSM5-208ENST00000450169 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.83□□□□□ -1.48
LSM5-208ENST00000450169 TRGV4A0A0C4DH28 118 aa5.82□□□□□ -1.48
LSM5-208ENST00000450169 IGLV6-57P01721 117 aa5.82□□□□□ -1.48
LSM5-208ENST00000450169 SYCNQ0VAF6 134 aa5.82□□□□□ -1.48
LSM5-208ENST00000450169 KTN1-AS1Q86SY8 53 aa5.82□□□□□ -1.48
LSM5-208ENST00000450169 FBN2P35556 2912 aa5.82□□□□□ -1.48
LSM5-208ENST00000450169 LCE6AA0A183 80 aa5.82□□□□□ -1.48
LSM5-208ENST00000450169 A8MUN3 132 aa5.82□□□□□ -1.48
LSM5-208ENST00000450169 UBE2BP63146 152 aa5.82□□□□□ -1.48
LSM5-208ENST00000450169 KIAA0087Q14695 138 aa5.82□□□□□ -1.48
LSM5-208ENST00000450169 RBM12B-AS1Q9P1G2 102 aa5.82□□□□□ -1.48
LSM5-208ENST00000450169 CELA1Q9UNI1 258 aa5.82□□□□□ -1.48
LSM5-208ENST00000450169 POLQO75417 2590 aa5.82□□□□□ -1.48
LSM5-208ENST00000450169 IGHV4-28A0A0C4DH34 117 aa5.81□□□□□ -1.48
LSM5-208ENST00000450169 A8MU10 97 aa5.81□□□□□ -1.48
LSM5-208ENST00000450169 UBR5O95071 2799 aaPredicted RBP5.81□□□□□ -1.48
LSM5-208ENST00000450169 CLPSL2Q6UWE3 100 aa5.81□□□□□ -1.48
LSM5-208ENST00000450169 SMIM29Q86T20 159 aa5.81□□□□□ -1.48
LSM5-208ENST00000450169 LINC00612Q8N6U2 182 aa5.81□□□□□ -1.48
LSM5-208ENST00000450169 LYRM9A8MSI8 78 aa5.81□□□□□ -1.48
LSM5-208ENST00000450169 DEFB136Q30KP8 78 aa5.81□□□□□ -1.48
LSM5-208ENST00000450169 LINC00269Q8N2A0 174 aa5.81□□□□□ -1.48
LSM5-208ENST00000450169 ZANQ9Y493 2812 aa5.8□□□□□ -1.48
LSM5-208ENST00000450169 IGHV4-30-2A0A087WSY4 118 aa5.8□□□□□ -1.48
LSM5-208ENST00000450169 PSCAO43653 123 aa5.8□□□□□ -1.48
LSM5-208ENST00000450169 STHQ8IWL8 128 aa5.8□□□□□ -1.48
LSM5-208ENST00000450169 DIRC1Q969H9 104 aa5.8□□□□□ -1.48
LSM5-208ENST00000450169 ZNF469Q96JG9 3925 aaPredicted RBP5.8□□□□□ -1.48
LSM5-208ENST00000450169 CCL24O00175 119 aa5.79□□□□□ -1.48
LSM5-208ENST00000450169 C10orf25Q5T742 122 aa5.79□□□□□ -1.48
LSM5-208ENST00000450169 LINC00588Q9Y4M8 146 aa5.79□□□□□ -1.48
LSM5-208ENST00000450169 IGHV4-59P01825 116 aa5.79□□□□□ -1.48
LSM5-208ENST00000450169 ZCCHC13Q8WW36 166 aaKnown RBP5.79□□□□□ -1.48
LSM5-208ENST00000450169 CYP4F30PQ9H0H9 118 aa5.79□□□□□ -1.48
LSM5-208ENST00000450169 USP9YO00507 2555 aaPredicted RBP5.79□□□□□ -1.48
LSM5-208ENST00000450169 IGHV4-61A0A0C4DH41 118 aa5.78□□□□□ -1.48
LSM5-208ENST00000450169 DEFB114Q30KQ6 69 aa5.78□□□□□ -1.48
LSM5-208ENST00000450169 HIGD2BQ4VC39 106 aa5.78□□□□□ -1.48
LSM5-208ENST00000450169 Q5VV11 94 aa5.78□□□□□ -1.48
LSM5-208ENST00000450169 PTPN13Q12923 2485 aa5.78□□□□□ -1.48
LSM5-208ENST00000450169 ABCA12Q86UK0 2595 aa5.78□□□□□ -1.48
LSM5-208ENST00000450169 ODF3L2Q3SX64 289 aa5.78□□□□□ -1.48
LSM5-208ENST00000450169 ANKRD17O75179 2603 aaKnown RBP5.78□□□□□ -1.48
LSM5-208ENST00000450169 UBE2AP49459 152 aa5.77□□□□□ -1.49
LSM5-208ENST00000450169 KLK12Q9UKR0 248 aa5.77□□□□□ -1.49
LSM5-208ENST00000450169 A0A1B0GUV1 79 aa5.77□□□□□ -1.49
LSM5-208ENST00000450169 C3orf84H3BNL1 204 aa5.77□□□□□ -1.49
LSM5-208ENST00000450169 ZNF73O43830 326 aaPredicted RBP5.77□□□□□ -1.49
LSM5-208ENST00000450169 IGHV4-30-4P0DP06 118 aa5.77□□□□□ -1.49
LSM5-208ENST00000450169 PRR4Q16378 134 aa5.77□□□□□ -1.49
LSM5-208ENST00000450169 C18orf65Q6ZTR6 163 aa5.77□□□□□ -1.49
LSM5-208ENST00000450169 C16orf74Q96GX8 76 aa5.77□□□□□ -1.49
LSM5-208ENST00000450169 M0R378 163 aa5.76□□□□□ -1.49
LSM5-208ENST00000450169 ELOF1P60002 83 aaKnown RBP5.76□□□□□ -1.49
LSM5-208ENST00000450169 CHD6Q8TD26 2715 aa5.76□□□□□ -1.49
LSM5-208ENST00000450169 WWC2-AS2Q96NR7 200 aa5.76□□□□□ -1.49
LSM5-208ENST00000450169 C16orf90A8MZG2 172 aa5.75□□□□□ -1.49
LSM5-208ENST00000450169 CHKB-CPT1BH3BT56 60 aa5.75□□□□□ -1.49
LSM5-208ENST00000450169 WNK1Q9H4A3 2382 aa5.75□□□□□ -1.49
LSM5-208ENST00000450169 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.74□□□□□ -1.49
LSM5-208ENST00000450169 PRB2P02812 416 aaPredicted RBP5.74□□□□□ -1.49
LSM5-208ENST00000450169 CHCHD10Q8WYQ3 142 aaPredicted RBP5.74□□□□□ -1.49
LSM5-208ENST00000450169 CSPG4Q6UVK1 2322 aa5.74□□□□□ -1.49
LSM5-208ENST00000450169 IGLV10-54A0A075B6I4 117 aa5.74□□□□□ -1.49
LSM5-208ENST00000450169 ETDCA0A1B0GVM5 59 aa5.74□□□□□ -1.49
LSM5-208ENST00000450169 MSMBP08118 114 aa5.74□□□□□ -1.49
LSM5-208ENST00000450169 DEFB112Q30KQ8 113 aa5.74□□□□□ -1.49
LSM5-208ENST00000450169 UNQ6190/PRO20217Q6UXQ8 127 aa5.74□□□□□ -1.49
LSM5-208ENST00000450169 SPTSSBQ8NFR3 76 aa5.74□□□□□ -1.49
LSM5-208ENST00000450169 TENM4Q6N022 2769 aa5.74□□□□□ -1.49
LSM5-208ENST00000450169 NDUFS5O43920 106 aa5.73□□□□□ -1.49
LSM5-208ENST00000450169 CCL19Q99731 98 aa5.73□□□□□ -1.49
LSM5-208ENST00000450169 NOTCH3Q9UM47 2321 aa5.73□□□□□ -1.49
LSM5-208ENST00000450169 KRTAP23-1A1A580 65 aa5.72□□□□□ -1.49
LSM5-208ENST00000450169 NDUFB1O75438 58 aa5.72□□□□□ -1.49
LSM5-208ENST00000450169 ATP11AUNQ6ZP68 121 aa5.72□□□□□ -1.49
LSM5-208ENST00000450169 ESM1Q9NQ30 184 aa5.72□□□□□ -1.49
LSM5-208ENST00000450169 A0A0J9YWU9 116 aa5.72□□□□□ -1.49
LSM5-208ENST00000450169 HCG22E2RYF7 251 aa5.72□□□□□ -1.49
LSM5-208ENST00000450169 SPAG11BQ08648 103 aa5.72□□□□□ -1.49
LSM5-208ENST00000450169 LIMD2Q9BT23 127 aa5.72□□□□□ -1.49
LSM5-208ENST00000450169 ZNF702PQ9H963 129 aa5.72□□□□□ -1.49
LSM5-208ENST00000450169 APCP25054 2843 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms