RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 UBE2DNLQ8IWF7 75 aa6.73□□□□□ -1.33
CCDC171-203ENST00000449575 OPRPNQ99935 248 aaPredicted RBP6.73□□□□□ -1.33
CCDC171-203ENST00000449575 FRAS1Q86XX4 4008 aa6.73□□□□□ -1.33
CCDC171-203ENST00000449575 LINC00336Q6ZUF6 198 aa6.73□□□□□ -1.33
CCDC171-203ENST00000449575 DPH3Q96FX2 82 aa6.73□□□□□ -1.33
CCDC171-203ENST00000449575 hADV29S1A0JD25 119 aa6.72□□□□□ -1.33
CCDC171-203ENST00000449575 CCL18P55774 89 aa6.72□□□□□ -1.33
CCDC171-203ENST00000449575 RPL18AQ02543 176 aaKnown RBP6.72□□□□□ -1.33
CCDC171-203ENST00000449575 DAZ4Q86SG3 579 aaKnown RBP6.72□□□□□ -1.33
CCDC171-203ENST00000449575 DAZ3Q9NR90 486 aaKnown RBP6.72□□□□□ -1.33
CCDC171-203ENST00000449575 TRBV10-1A0A0K0K1A3 114 aa6.72□□□□□ -1.33
CCDC171-203ENST00000449575 WFDC10BQ8IUB3 73 aa6.72□□□□□ -1.33
CCDC171-203ENST00000449575 BAALC-AS2P0C853 105 aa6.71□□□□□ -1.33
CCDC171-203ENST00000449575 Q8N3U1 123 aa6.71□□□□□ -1.33
CCDC171-203ENST00000449575 SERP2Q8N6R1 65 aa6.71□□□□□ -1.33
CCDC171-203ENST00000449575 M0R2N4 97 aa6.71□□□□□ -1.34
CCDC171-203ENST00000449575 RPL36AP83881 106 aaKnown RBP6.71□□□□□ -1.34
CCDC171-203ENST00000449575 RPL36ALQ969Q0 106 aaKnown RBP6.71□□□□□ -1.34
CCDC171-203ENST00000449575 OXTP01178 125 aa6.7□□□□□ -1.34
CCDC171-203ENST00000449575 NPC2P61916 151 aa6.7□□□□□ -1.34
CCDC171-203ENST00000449575 NTM-AS1Q6ZSK4 140 aa6.7□□□□□ -1.34
CCDC171-203ENST00000449575 KRTAP1-5Q9BYS1 174 aa6.7□□□□□ -1.34
CCDC171-203ENST00000449575 Q9H8V8 135 aa6.69□□□□□ -1.34
CCDC171-203ENST00000449575 PKIGQ9Y2B9 76 aa6.69□□□□□ -1.34
CCDC171-203ENST00000449575 NDUFA1O15239 70 aa6.69□□□□□ -1.34
CCDC171-203ENST00000449575 Q6JHZ5 121 aa6.69□□□□□ -1.34
CCDC171-203ENST00000449575 UPK3BQ9BT76 320 aa6.68□□□□□ -1.34
CCDC171-203ENST00000449575 NDUFC2-KCTD14E9PQ53 114 aa6.68□□□□□ -1.34
CCDC171-203ENST00000449575 TRAV13-1A0A0B4J241 112 aa6.67□□□□□ -1.34
CCDC171-203ENST00000449575 DNAL4O96015 105 aa6.67□□□□□ -1.34
CCDC171-203ENST00000449575 LINC00308Q8TCZ7 52 aa6.67□□□□□ -1.34
CCDC171-203ENST00000449575 LELP1Q5T871 98 aa6.67□□□□□ -1.34
CCDC171-203ENST00000449575 TRBV6-8A0A0A6YYG3 113 aa6.66□□□□□ -1.34
CCDC171-203ENST00000449575 FAM19A1Q7Z5A9 133 aa6.66□□□□□ -1.34
CCDC171-203ENST00000449575 Q6ZR54 194 aa6.65□□□□□ -1.34
CCDC171-203ENST00000449575 FAT2Q9NYQ8 4349 aa6.65□□□□□ -1.34
CCDC171-203ENST00000449575 NBDYA0A0U1RRE5 68 aa6.65□□□□□ -1.34
CCDC171-203ENST00000449575 H3BS24 57 aa6.65□□□□□ -1.34
CCDC171-203ENST00000449575 NDUFC2O95298 119 aa6.65□□□□□ -1.34
CCDC171-203ENST00000449575 PRO0628Q9UI54 55 aa6.65□□□□□ -1.34
CCDC171-203ENST00000449575 DNAH17Q9UFH2 4485 aa6.65□□□□□ -1.35
CCDC171-203ENST00000449575 DNAH10OSP0CZ25 163 aa6.63□□□□□ -1.35
CCDC171-203ENST00000449575 Q5XG85 94 aa6.63□□□□□ -1.35
CCDC171-203ENST00000449575 IGLV5-45A0A087WSX0 123 aa6.63□□□□□ -1.35
CCDC171-203ENST00000449575 USP17L23D6RBM5 183 aa6.63□□□□□ -1.35
CCDC171-203ENST00000449575 FAM104AQ969W3 186 aa6.63□□□□□ -1.35
CCDC171-203ENST00000449575 DSCR8Q96T75 97 aa6.63□□□□□ -1.35
CCDC171-203ENST00000449575 TRAV13-2A0A0B4J235 113 aa6.63□□□□□ -1.35
CCDC171-203ENST00000449575 S100A7L2Q5SY68 101 aa6.63□□□□□ -1.35
CCDC171-203ENST00000449575 HRCT1Q6UXD1 115 aa6.63□□□□□ -1.35
CCDC171-203ENST00000449575 C22orf24Q9Y442 160 aa6.63□□□□□ -1.35
CCDC171-203ENST00000449575 LINC01556Q5JQF7 62 aa6.62□□□□□ -1.35
CCDC171-203ENST00000449575 CHCHD7Q9BUK0 85 aa6.62□□□□□ -1.35
CCDC171-203ENST00000449575 CYSTM1Q9H1C7 97 aa6.62□□□□□ -1.35
CCDC171-203ENST00000449575 UBE2D4Q9Y2X8 147 aa6.62□□□□□ -1.35
CCDC171-203ENST00000449575 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.62□□□□□ -1.35
CCDC171-203ENST00000449575 IGKV2-29A2NJV5 120 aaPredicted RBP6.62□□□□□ -1.35
CCDC171-203ENST00000449575 RPL28P46779 137 aaKnown RBP6.62□□□□□ -1.35
CCDC171-203ENST00000449575 IGKV3D-7A0A0C4DH55 119 aa6.61□□□□□ -1.35
CCDC171-203ENST00000449575 C1orf195Q5TG92 126 aa6.61□□□□□ -1.35
CCDC171-203ENST00000449575 ATP5EP2Q5VTU8 51 aa6.61□□□□□ -1.35
CCDC171-203ENST00000449575 CDKN2A-AS1Q9UH64 79 aa6.61□□□□□ -1.35
CCDC171-203ENST00000449575 PKD1P98161 4303 aa6.6□□□□□ -1.35
CCDC171-203ENST00000449575 IGLV5-39A0A0G2JS06 123 aa6.6□□□□□ -1.35
CCDC171-203ENST00000449575 H0YGX0 51 aa6.6□□□□□ -1.35
CCDC171-203ENST00000449575 RTL8CO15255 209 aa6.6□□□□□ -1.35
CCDC171-203ENST00000449575 TMEM243Q9BU79 118 aa6.6□□□□□ -1.35
CCDC171-203ENST00000449575 IGLV4-60A0A075B6I1 120 aa6.6□□□□□ -1.35
CCDC171-203ENST00000449575 RNASE13Q5GAN3 156 aaKnown RBP6.6□□□□□ -1.35
CCDC171-203ENST00000449575 OBSCN-AS1Q96MR7 158 aa6.6□□□□□ -1.35
CCDC171-203ENST00000449575 KLK12Q9UKR0 248 aa6.6□□□□□ -1.35
CCDC171-203ENST00000449575 CRPP02741 224 aa6.59□□□□□ -1.35
CCDC171-203ENST00000449575 LINC01561Q8N1V8 128 aa6.59□□□□□ -1.35
CCDC171-203ENST00000449575 FAM218AQ96MZ4 157 aa6.59□□□□□ -1.35
CCDC171-203ENST00000449575 Q9HAA7 133 aa6.59□□□□□ -1.35
CCDC171-203ENST00000449575 DNAH11Q96DT5 4516 aa6.59□□□□□ -1.35
CCDC171-203ENST00000449575 CLPSL2Q6UWE3 100 aa6.59□□□□□ -1.36
CCDC171-203ENST00000449575 EPPK1P58107 5090 aaKnown RBP6.58□□□□□ -1.36
CCDC171-203ENST00000449575 LINC00846Q9NV44 126 aa6.58□□□□□ -1.36
CCDC171-203ENST00000449575 IBA57-AS1B1ANH7 110 aa6.58□□□□□ -1.36
CCDC171-203ENST00000449575 C1orf134Q5TEV5 83 aa6.58□□□□□ -1.36
CCDC171-203ENST00000449575 SERTAD4-AS1Q5TG53 156 aa6.58□□□□□ -1.36
CCDC171-203ENST00000449575 SOSTDC1Q6X4U4 206 aa6.58□□□□□ -1.36
CCDC171-203ENST00000449575 Q6ZRN7 208 aaPredicted RBP6.58□□□□□ -1.36
CCDC171-203ENST00000449575 C6orf223Q8N319 242 aa6.58□□□□□ -1.36
CCDC171-203ENST00000449575 C14orf132Q9NPU4 83 aa6.58□□□□□ -1.36
CCDC171-203ENST00000449575 PKHD1P08F94 4074 aa6.57□□□□□ -1.36
CCDC171-203ENST00000449575 FAM236DA0A1B0GTK5 79 aa6.57□□□□□ -1.36
CCDC171-203ENST00000449575 ANGP03950 147 aaKnown RBP6.57□□□□□ -1.36
CCDC171-203ENST00000449575 FAM236CP0DP71 79 aa6.57□□□□□ -1.36
CCDC171-203ENST00000449575 FAM19A3Q7Z5A8 133 aa6.57□□□□□ -1.36
CCDC171-203ENST00000449575 SERP1Q9Y6X1 66 aa6.57□□□□□ -1.36
CCDC171-203ENST00000449575 UBE2L6O14933 153 aa6.57□□□□□ -1.36
CCDC171-203ENST00000449575 PFN2P35080 140 aa6.57□□□□□ -1.36
CCDC171-203ENST00000449575 ENHOQ6UWT2 76 aa6.57□□□□□ -1.36
CCDC171-203ENST00000449575 BCE1O60756 84 aa6.56□□□□□ -1.36
CCDC171-203ENST00000449575 LINC00269Q8N2A0 174 aa6.56□□□□□ -1.36
CCDC171-203ENST00000449575 A0A087WVE0 104 aa6.56□□□□□ -1.36
CCDC171-203ENST00000449575 GHRHP01286 108 aa6.56□□□□□ -1.36
CCDC171-203ENST00000449575 TNP2Q05952 138 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms